RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 ITKQ08881 620 aa15.31■□□□□ 0.04
DDX56-201ENST00000258772 TMEM207Q6UWW9 146 aa15.31■□□□□ 0.04
DDX56-201ENST00000258772 SPATA2LQ8IUW3 424 aaPredicted RBP15.31■□□□□ 0.04
DDX56-201ENST00000258772 EME1Q96AY2 570 aa15.31■□□□□ 0.04
DDX56-201ENST00000258772 ZFRQ96KR1 1074 aaKnown RBP15.31■□□□□ 0.04
DDX56-201ENST00000258772 C1orf74Q96LT6 269 aa15.31■□□□□ 0.04
DDX56-201ENST00000258772 PRPF18Q99633 342 aaKnown RBP15.31■□□□□ 0.04
DDX56-201ENST00000258772 SLC2A11Q9BYW1 496 aa15.31■□□□□ 0.04
DDX56-201ENST00000258772 VPS45Q9NRW7 570 aa15.31■□□□□ 0.04
DDX56-201ENST00000258772 FNIP2Q9P278 1114 aa15.31■□□□□ 0.04
DDX56-201ENST00000258772 CD300AQ9UGN4 299 aa15.31■□□□□ 0.04
DDX56-201ENST00000258772 DNAH12Q6ZR08 3092 aa15.3■□□□□ 0.04
DDX56-201ENST00000258772 A0A1W2PQH9 124 aa15.3■□□□□ 0.04
DDX56-201ENST00000258772 J3KR12 359 aa15.3■□□□□ 0.04
DDX56-201ENST00000258772 GPR182O15218 404 aa15.3■□□□□ 0.04
DDX56-201ENST00000258772 SLC7A4O43246 635 aa15.3■□□□□ 0.04
DDX56-201ENST00000258772 ZNF623O75123 536 aa15.3■□□□□ 0.04
DDX56-201ENST00000258772 WISP3O95389 354 aaPredicted RBP15.3■□□□□ 0.04
DDX56-201ENST00000258772 S1PR4O95977 384 aa15.3■□□□□ 0.04
DDX56-201ENST00000258772 RGS2P41220 211 aa15.3■□□□□ 0.04
DDX56-201ENST00000258772 IHHQ14623 411 aa15.3■□□□□ 0.04
DDX56-201ENST00000258772 NADK2Q4G0N4 442 aa15.3■□□□□ 0.04
DDX56-201ENST00000258772 PIK3R6Q5UE93 754 aa15.3■□□□□ 0.04
DDX56-201ENST00000258772 CLEC6AQ6EIG7 209 aa15.3■□□□□ 0.04
DDX56-201ENST00000258772 GDF6Q6KF10 455 aaPredicted RBP15.3■□□□□ 0.04
DDX56-201ENST00000258772 CYHR1Q6ZMK1 362 aa15.3■□□□□ 0.04
DDX56-201ENST00000258772 RBM44Q6ZP01 1051 aaKnown RBP15.3■□□□□ 0.04
DDX56-201ENST00000258772 LARP4Q71RC2 724 aaKnown RBP eCLIP15.3■□□□□ 0.04
DDX56-201ENST00000258772 ISCA2Q86U28 154 aa15.3■□□□□ 0.04
DDX56-201ENST00000258772 LDB1Q86U70 411 aaPredicted RBP15.3■□□□□ 0.04
DDX56-201ENST00000258772 UMODL1-AS1Q8N2C9 162 aa15.3■□□□□ 0.04
DDX56-201ENST00000258772 SNX31Q8N9S9 440 aa15.3■□□□□ 0.04
DDX56-201ENST00000258772 OR6P1Q8NGX9 317 aa15.3■□□□□ 0.04
DDX56-201ENST00000258772 TRMOQ9BU70 441 aa15.3■□□□□ 0.04
DDX56-201ENST00000258772 SLC25A23Q9BV35 468 aa15.3■□□□□ 0.04
DDX56-201ENST00000258772 SEMA6AQ9H2E6 1030 aa15.3■□□□□ 0.04
DDX56-201ENST00000258772 SPAG4Q9NPE6 437 aa15.3■□□□□ 0.04
DDX56-201ENST00000258772 A0A1B0GVG6 124 aa15.29■□□□□ 0.04
DDX56-201ENST00000258772 H0YJX3 145 aa15.29■□□□□ 0.04
DDX56-201ENST00000258772 MRASO14807 208 aa15.29■□□□□ 0.04
DDX56-201ENST00000258772 NRP2O60462 931 aa15.29■□□□□ 0.04
DDX56-201ENST00000258772 MGEA5O60502 916 aa15.29■□□□□ 0.04
DDX56-201ENST00000258772 SUPT7LO94864 414 aa15.29■□□□□ 0.04
DDX56-201ENST00000258772 ITGB1P05556 798 aa15.29■□□□□ 0.04
DDX56-201ENST00000258772 ATP6V1B1P15313 513 aa15.29■□□□□ 0.04
DDX56-201ENST00000258772 YWHAQP27348 245 aa15.29■□□□□ 0.04
DDX56-201ENST00000258772 ARSDP51689 593 aa15.29■□□□□ 0.04
DDX56-201ENST00000258772 CDKN2DP55273 166 aa15.29■□□□□ 0.04
DDX56-201ENST00000258772 CREB5Q02930 508 aa15.29■□□□□ 0.04
DDX56-201ENST00000258772 SLC10A7Q0GE19 358 aa15.29■□□□□ 0.04
DDX56-201ENST00000258772 RALGDSQ12967 914 aa15.29■□□□□ 0.04
DDX56-201ENST00000258772 USP41Q3LFD5 358 aa15.29■□□□□ 0.04
DDX56-201ENST00000258772 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.29■□□□□ 0.04
DDX56-201ENST00000258772 ZNF678Q5SXM1 525 aa15.29■□□□□ 0.04
DDX56-201ENST00000258772 GPR158Q5T848 1215 aa15.29■□□□□ 0.04
DDX56-201ENST00000258772 MARC1Q5VT66 337 aa15.29■□□□□ 0.04
DDX56-201ENST00000258772 FAM219BQ5XKK7 198 aa15.29■□□□□ 0.04
DDX56-201ENST00000258772 LRTOMTQ8WZ04 291 aa15.29■□□□□ 0.04
DDX56-201ENST00000258772 HDAC10Q969S8 669 aa15.29■□□□□ 0.04
DDX56-201ENST00000258772 SERPINB11Q96P15 392 aa15.29■□□□□ 0.04
DDX56-201ENST00000258772 KLHL5Q96PQ7 755 aa15.29■□□□□ 0.04
DDX56-201ENST00000258772 ALG9Q9H6U8 611 aa15.29■□□□□ 0.04
DDX56-201ENST00000258772 COQ10BQ9H8M1 238 aa15.29■□□□□ 0.04
DDX56-201ENST00000258772 AK5Q9Y6K8 562 aa15.29■□□□□ 0.04
DDX56-201ENST00000258772 MYOCOSA0A1B0GUC4 107 aa15.29■□□□□ 0.04
DDX56-201ENST00000258772 C7orf72A4D263 438 aa15.29■□□□□ 0.04
DDX56-201ENST00000258772 ANKRD33BA6NCL7 494 aa15.29■□□□□ 0.04
DDX56-201ENST00000258772 MROH6A6NGR9 719 aa15.29■□□□□ 0.04
DDX56-201ENST00000258772 CCL22O00626 93 aa15.29■□□□□ 0.04
DDX56-201ENST00000258772 PENKP01210 267 aaPredicted RBP15.29■□□□□ 0.04
DDX56-201ENST00000258772 MMP2P08253 660 aa15.29■□□□□ 0.04
DDX56-201ENST00000258772 SLC26A3P40879 764 aa15.29■□□□□ 0.04
DDX56-201ENST00000258772 NRF1Q16656 503 aa15.29■□□□□ 0.04
DDX56-201ENST00000258772 TFAP2DQ7Z6R9 452 aa15.29■□□□□ 0.04
DDX56-201ENST00000258772 OR9I1Q8NGQ6 314 aa15.29■□□□□ 0.04
DDX56-201ENST00000258772 SLCO4A1Q96BD0 722 aa15.29■□□□□ 0.04
DDX56-201ENST00000258772 L3HYPDHQ96EM0 354 aa15.29■□□□□ 0.04
DDX56-201ENST00000258772 HMCESQ96FZ2 354 aa15.29■□□□□ 0.04
DDX56-201ENST00000258772 GRIP2Q9C0E4 1043 aa15.29■□□□□ 0.04
DDX56-201ENST00000258772 ZCWPW1Q9H0M4 648 aa15.29■□□□□ 0.04
DDX56-201ENST00000258772 MFSD1Q9H3U5 465 aa15.29■□□□□ 0.04
DDX56-201ENST00000258772 TMEM181Q9P2C4 612 aa15.29■□□□□ 0.04
DDX56-201ENST00000258772 CROTQ9UKG9 612 aa15.29■□□□□ 0.04
DDX56-201ENST00000258772 MYO16Q9Y6X6 1858 aa15.29■□□□□ 0.04
DDX56-201ENST00000258772 ATP6AP2A0A1C7CYW4 349 aa15.28■□□□□ 0.04
DDX56-201ENST00000258772 TCRBV3S1A0A5B6 114 aa15.28■□□□□ 0.04
DDX56-201ENST00000258772 GLTPD2A6NH11 291 aa15.28■□□□□ 0.04
DDX56-201ENST00000258772 ATP6AP2O75787 350 aa15.28■□□□□ 0.04
DDX56-201ENST00000258772 CSPG5O95196 566 aa15.28■□□□□ 0.04
DDX56-201ENST00000258772 MT-CO1P00395 513 aa15.28■□□□□ 0.04
DDX56-201ENST00000258772 MYCNP04198 464 aaPredicted RBP15.28■□□□□ 0.04
DDX56-201ENST00000258772 HAPLN1P10915 354 aaPredicted RBP15.28■□□□□ 0.04
DDX56-201ENST00000258772 TSPAN8P19075 237 aa15.28■□□□□ 0.04
DDX56-201ENST00000258772 NDST2P52849 883 aa15.28■□□□□ 0.04
DDX56-201ENST00000258772 DSC2Q02487 901 aa15.28■□□□□ 0.04
DDX56-201ENST00000258772 TUSC3Q13454 348 aa15.28■□□□□ 0.04
DDX56-201ENST00000258772 UNC50Q53HI1 259 aa15.28■□□□□ 0.04
DDX56-201ENST00000258772 FAM45BPQ6NSW5 357 aa15.28■□□□□ 0.04
DDX56-201ENST00000258772 C8orf82Q6P1X6 216 aaPredicted RBP15.28■□□□□ 0.04
DDX56-201ENST00000258772 LAYNQ6UX15 382 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms