RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 GBP7Q8N8V2 638 aaPredicted RBP22.76■■□□□ 1.23
CDX1-201ENST00000231656 PPM1EQ8WY54 764 aa22.76■■□□□ 1.23
CDX1-201ENST00000231656 MYLIPQ8WY64 445 aa22.76■■□□□ 1.23
CDX1-201ENST00000231656 LMLNQ96KR4 655 aa22.76■■□□□ 1.23
CDX1-201ENST00000231656 FAM83CQ9BQN1 747 aa22.76■■□□□ 1.23
CDX1-201ENST00000231656 POLR1EQ9GZS1 481 aaKnown RBP22.76■■□□□ 1.23
CDX1-201ENST00000231656 ABCB8Q9NUT2 735 aa22.76■■□□□ 1.23
CDX1-201ENST00000231656 THG1LQ9NWX6 298 aaKnown RBP22.76■■□□□ 1.23
CDX1-201ENST00000231656 UBA2Q9UBT2 640 aaPredicted RBP22.76■■□□□ 1.23
CDX1-201ENST00000231656 LOC285095A0A1B0GVY8 99 aa22.76■■□□□ 1.23
CDX1-201ENST00000231656 VAPBO95292 243 aa22.76■■□□□ 1.23
CDX1-201ENST00000231656 PROCP04070 461 aa22.76■■□□□ 1.23
CDX1-201ENST00000231656 MPOP05164 745 aa22.76■■□□□ 1.23
CDX1-201ENST00000231656 ARSAP15289 507 aa22.76■■□□□ 1.23
CDX1-201ENST00000231656 CSRP3P50461 194 aa22.76■■□□□ 1.23
CDX1-201ENST00000231656 FCHO2Q0JRZ9 810 aa22.76■■□□□ 1.23
CDX1-201ENST00000231656 BST1Q10588 318 aa22.76■■□□□ 1.23
CDX1-201ENST00000231656 CHI3L2Q15782 390 aa22.76■■□□□ 1.23
CDX1-201ENST00000231656 CNGA3Q16281 694 aa22.76■■□□□ 1.23
CDX1-201ENST00000231656 ATG16L1Q676U5 607 aa22.76■■□□□ 1.23
CDX1-201ENST00000231656 ALG1LQ6GMV1 187 aa22.76■■□□□ 1.23
CDX1-201ENST00000231656 ASTLQ6HA08 431 aaPredicted RBP22.76■■□□□ 1.23
CDX1-201ENST00000231656 ZC3HC1Q86WB0 502 aaKnown RBP22.76■■□□□ 1.23
CDX1-201ENST00000231656 MFSD6LQ8IWD5 586 aa22.76■■□□□ 1.23
CDX1-201ENST00000231656 DCAF4L2Q8NA75 395 aa22.76■■□□□ 1.23
CDX1-201ENST00000231656 ACVR1CQ8NER5 493 aa22.76■■□□□ 1.23
CDX1-201ENST00000231656 RFWD2Q8NHY2 731 aa22.76■■□□□ 1.23
CDX1-201ENST00000231656 GPR22Q99680 433 aa22.76■■□□□ 1.23
CDX1-201ENST00000231656 SEMA3CQ99985 751 aa22.76■■□□□ 1.23
CDX1-201ENST00000231656 PLA2G2FQ9BZM2 168 aa22.76■■□□□ 1.23
CDX1-201ENST00000231656 RHOJQ9H4E5 214 aa22.76■■□□□ 1.23
CDX1-201ENST00000231656 VPS51Q9UID3 782 aa22.76■■□□□ 1.23
CDX1-201ENST00000231656 HEATR9A2RTY3 570 aa22.75■■□□□ 1.23
CDX1-201ENST00000231656 GJB3O75712 270 aa22.75■■□□□ 1.23
CDX1-201ENST00000231656 ATXN1LP0C7T5 689 aaKnown RBP22.75■■□□□ 1.23
CDX1-201ENST00000231656 GABRB3P28472 473 aa22.75■■□□□ 1.23
CDX1-201ENST00000231656 GMPRP36959 345 aa22.75■■□□□ 1.23
CDX1-201ENST00000231656 SEPT6Q14141 434 aa22.75■■□□□ 1.23
CDX1-201ENST00000231656 ZNF235Q14590 738 aa22.75■■□□□ 1.23
CDX1-201ENST00000231656 CCDC85BQ15834 202 aaPredicted RBP22.75■■□□□ 1.23
CDX1-201ENST00000231656 PARM1Q6UWI2 310 aa22.75■■□□□ 1.23
CDX1-201ENST00000231656 Q7L0L9 218 aa22.75■■□□□ 1.23
CDX1-201ENST00000231656 ZNF557Q8N988 423 aaPredicted RBP22.75■■□□□ 1.23
CDX1-201ENST00000231656 FGF14Q92915 247 aa22.75■■□□□ 1.23
CDX1-201ENST00000231656 ELSPBP1Q96BH3 223 aa22.75■■□□□ 1.23
CDX1-201ENST00000231656 C7orf26Q96N11 449 aa22.75■■□□□ 1.23
CDX1-201ENST00000231656 KXD1Q9BQD3 176 aa22.75■■□□□ 1.23
CDX1-201ENST00000231656 EBF3Q9H4W6 596 aa22.75■■□□□ 1.23
CDX1-201ENST00000231656 CAB39LQ9H9S4 337 aa22.75■■□□□ 1.23
CDX1-201ENST00000231656 INTS6Q9UL03 887 aaKnown RBP22.75■■□□□ 1.23
CDX1-201ENST00000231656 CHKBQ9Y259 395 aa22.75■■□□□ 1.23
CDX1-201ENST00000231656 DNAJC8O75937 253 aaPredicted RBP22.74■■□□□ 1.23
CDX1-201ENST00000231656 ADH1CP00326 375 aa22.74■■□□□ 1.23
CDX1-201ENST00000231656 ADH5P11766 374 aa22.74■■□□□ 1.23
CDX1-201ENST00000231656 PAMP19021 973 aa22.74■■□□□ 1.23
CDX1-201ENST00000231656 HADHAP40939 763 aa22.74■■□□□ 1.23
CDX1-201ENST00000231656 PLK1P53350 603 aa22.74■■□□□ 1.23
CDX1-201ENST00000231656 BNIP1Q12981 228 aa22.74■■□□□ 1.23
CDX1-201ENST00000231656 SLC12A1Q13621 1099 aa22.74■■□□□ 1.23
CDX1-201ENST00000231656 RFTN1Q14699 578 aaPredicted RBP22.74■■□□□ 1.23
CDX1-201ENST00000231656 GRM3Q14832 879 aa22.74■■□□□ 1.23
CDX1-201ENST00000231656 PLEKHG6Q3KR16 790 aa22.74■■□□□ 1.23
CDX1-201ENST00000231656 SIRPB2Q5JXA9 342 aa22.74■■□□□ 1.23
CDX1-201ENST00000231656 LINGO4Q6UY18 593 aa22.74■■□□□ 1.23
CDX1-201ENST00000231656 CLEC14AQ86T13 490 aa22.74■■□□□ 1.23
CDX1-201ENST00000231656 NAT16Q8N8M0 369 aa22.74■■□□□ 1.23
CDX1-201ENST00000231656 CDX2Q99626 313 aaPredicted RBP22.74■■□□□ 1.23
CDX1-201ENST00000231656 C2orf49Q9BVC5 232 aaPredicted RBP22.74■■□□□ 1.23
CDX1-201ENST00000231656 TRIM55Q9BYV6 548 aa22.74■■□□□ 1.23
CDX1-201ENST00000231656 TMEM216Q9P0N5 145 aa22.74■■□□□ 1.23
CDX1-201ENST00000231656 HOXC11O43248 304 aaPredicted RBP22.73■■□□□ 1.23
CDX1-201ENST00000231656 SNNO75324 88 aaPredicted RBP22.73■■□□□ 1.23
CDX1-201ENST00000231656 NFATC1O95644 943 aa22.73■■□□□ 1.23
CDX1-201ENST00000231656 CD160O95971 181 aa22.73■■□□□ 1.23
CDX1-201ENST00000231656 AHSGP02765 367 aa22.73■■□□□ 1.23
CDX1-201ENST00000231656 ALDH3A1P30838 453 aa22.73■■□□□ 1.23
CDX1-201ENST00000231656 IRX4P78413 519 aa22.73■■□□□ 1.23
CDX1-201ENST00000231656 TMPRSS15P98073 1019 aa22.73■■□□□ 1.23
CDX1-201ENST00000231656 OCRLQ01968 901 aa22.73■■□□□ 1.23
CDX1-201ENST00000231656 PDGFRLQ15198 375 aa22.73■■□□□ 1.23
CDX1-201ENST00000231656 FASTKD1Q53R41 847 aaKnown RBP22.73■■□□□ 1.23
CDX1-201ENST00000231656 PLD6Q8N2A8 252 aaKnown RBP22.73■■□□□ 1.23
CDX1-201ENST00000231656 ACDQ96AP0 544 aa22.73■■□□□ 1.23
CDX1-201ENST00000231656 SLC2A11Q9BYW1 496 aa22.73■■□□□ 1.23
CDX1-201ENST00000231656 A0A096LPK6 155 aa22.73■■□□□ 1.23
CDX1-201ENST00000231656 OTOL1A6NHN0 477 aaPredicted RBP22.73■■□□□ 1.23
CDX1-201ENST00000231656 PAPSS2O95340 614 aaPredicted RBP22.73■■□□□ 1.23
CDX1-201ENST00000231656 PSMC3P17980 439 aa22.73■■□□□ 1.23
CDX1-201ENST00000231656 KCNA5P22460 613 aa22.73■■□□□ 1.23
CDX1-201ENST00000231656 MPP1Q00013 466 aa22.73■■□□□ 1.23
CDX1-201ENST00000231656 GRM2Q14416 872 aa22.73■■□□□ 1.23
CDX1-201ENST00000231656 PCLAFQ15004 111 aa22.73■■□□□ 1.23
CDX1-201ENST00000231656 DLG2Q15700 870 aa22.73■■□□□ 1.23
CDX1-201ENST00000231656 UGP2Q16851 508 aa22.73■■□□□ 1.23
CDX1-201ENST00000231656 TSTD2Q5T7W7 516 aa22.73■■□□□ 1.23
CDX1-201ENST00000231656 MBLAC2Q68D91 279 aa22.73■■□□□ 1.23
CDX1-201ENST00000231656 DENND6AQ8IWF6 608 aa22.73■■□□□ 1.23
CDX1-201ENST00000231656 FEM1CQ96JP0 617 aa22.73■■□□□ 1.23
CDX1-201ENST00000231656 PSKH2Q96QS6 385 aa22.73■■□□□ 1.23
CDX1-201ENST00000231656 MGME1Q9BQP7 344 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms