RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 SLC32A1Q9H598 525 aa17.41■□□□□ 0.38
SHKBP1-212ENST00000596163 PHTF1Q9UMS5 762 aa17.41■□□□□ 0.38
SHKBP1-212ENST00000596163 ITM2BQ9Y287 266 aa17.41■□□□□ 0.38
SHKBP1-212ENST00000596163 TTC24A2A3L6 582 aaPredicted RBP17.4■□□□□ 0.38
SHKBP1-212ENST00000596163 HACD1B0YJ81 288 aa17.4■□□□□ 0.38
SHKBP1-212ENST00000596163 APOC4-APOC2K7ER74 178 aa17.4■□□□□ 0.38
SHKBP1-212ENST00000596163 KCNK1O00180 336 aa17.4■□□□□ 0.38
SHKBP1-212ENST00000596163 FPGTO14772 594 aa17.4■□□□□ 0.38
SHKBP1-212ENST00000596163 WNT9AO14904 365 aa17.4■□□□□ 0.38
SHKBP1-212ENST00000596163 YKT6O15498 198 aa17.4■□□□□ 0.38
SHKBP1-212ENST00000596163 MMP20O60882 483 aa17.4■□□□□ 0.38
SHKBP1-212ENST00000596163 TJP3O95049 919 aa17.4■□□□□ 0.38
SHKBP1-212ENST00000596163 CPP00450 1065 aa17.4■□□□□ 0.38
SHKBP1-212ENST00000596163 APOC2P02655 101 aa17.4■□□□□ 0.38
SHKBP1-212ENST00000596163 WNT1P04628 370 aa17.4■□□□□ 0.38
SHKBP1-212ENST00000596163 PTMAP06454 111 aaKnown RBP17.4■□□□□ 0.38
SHKBP1-212ENST00000596163 LLGL1Q15334 1064 aa17.4■□□□□ 0.38
SHKBP1-212ENST00000596163 ZNF423Q2M1K9 1284 aa17.4■□□□□ 0.38
SHKBP1-212ENST00000596163 LRRC73Q5JTD7 316 aa17.4■□□□□ 0.38
SHKBP1-212ENST00000596163 WRAP53Q9BUR4 548 aaKnown RBP17.4■□□□□ 0.38
SHKBP1-212ENST00000596163 HEMGNQ9BXL5 484 aa17.4■□□□□ 0.38
SHKBP1-212ENST00000596163 OSBPL8Q9BZF1 889 aa17.4■□□□□ 0.38
SHKBP1-212ENST00000596163 ERVMER34-1Q9H9K5 563 aa17.4■□□□□ 0.38
SHKBP1-212ENST00000596163 SEPT10Q9P0V9 454 aa17.4■□□□□ 0.38
SHKBP1-212ENST00000596163 GGT7Q9UJ14 662 aa17.4■□□□□ 0.38
SHKBP1-212ENST00000596163 PCDHB9Q9Y5E1 797 aa17.4■□□□□ 0.38
SHKBP1-212ENST00000596163 PCDHGB2Q9Y5G2 931 aa17.4■□□□□ 0.38
SHKBP1-212ENST00000596163 RAI2Q9Y5P3 530 aa17.4■□□□□ 0.38
SHKBP1-212ENST00000596163 DCDC2BA2VCK2 349 aa17.39■□□□□ 0.37
SHKBP1-212ENST00000596163 A6NNZ2 444 aa17.39■□□□□ 0.37
SHKBP1-212ENST00000596163 TM4SF5O14894 197 aa17.39■□□□□ 0.37
SHKBP1-212ENST00000596163 SPINT1O43278 529 aa17.39■□□□□ 0.37
SHKBP1-212ENST00000596163 LZTS3O60299 673 aaPredicted RBP17.39■□□□□ 0.37
SHKBP1-212ENST00000596163 GJB3O75712 270 aa17.39■□□□□ 0.37
SHKBP1-212ENST00000596163 ZNF189O75820 626 aaPredicted RBP17.39■□□□□ 0.37
SHKBP1-212ENST00000596163 HLA-DQB2P05538 268 aa17.39■□□□□ 0.37
SHKBP1-212ENST00000596163 CYP2A6P11509 494 aaPredicted RBP17.39■□□□□ 0.37
SHKBP1-212ENST00000596163 NXPH1P58417 271 aa17.39■□□□□ 0.37
SHKBP1-212ENST00000596163 CCZ1BP86790 482 aa17.39■□□□□ 0.37
SHKBP1-212ENST00000596163 CCZ1P86791 482 aaPredicted RBP17.39■□□□□ 0.37
SHKBP1-212ENST00000596163 TRAF2Q12933 501 aa17.39■□□□□ 0.37
SHKBP1-212ENST00000596163 XRCC4Q13426 336 aa17.39■□□□□ 0.37
SHKBP1-212ENST00000596163 LAYNQ6UX15 382 aa17.39■□□□□ 0.37
SHKBP1-212ENST00000596163 DPPA4Q7L190 304 aa17.39■□□□□ 0.37
SHKBP1-212ENST00000596163 ZSWIM9Q86XI8 627 aa17.39■□□□□ 0.37
SHKBP1-212ENST00000596163 OR2I1PQ8NGU4 316 aa17.39■□□□□ 0.37
SHKBP1-212ENST00000596163 LRRN4Q8WUT4 740 aa17.39■□□□□ 0.37
SHKBP1-212ENST00000596163 ALS2CR12Q96Q35 445 aa17.39■□□□□ 0.37
SHKBP1-212ENST00000596163 ELF4Q99607 663 aaPredicted RBP17.39■□□□□ 0.37
SHKBP1-212ENST00000596163 MYOCQ99972 504 aa17.39■□□□□ 0.37
SHKBP1-212ENST00000596163 TM7SF3Q9NS93 570 aa17.39■□□□□ 0.37
SHKBP1-212ENST00000596163 KCTD5Q9NXV2 234 aa17.39■□□□□ 0.37
SHKBP1-212ENST00000596163 SAE1Q9UBE0 346 aaPredicted RBP17.39■□□□□ 0.37
SHKBP1-212ENST00000596163 A0A0U1RQJ8 604 aa17.38■□□□□ 0.37
SHKBP1-212ENST00000596163 GOLGA6L9A6NEM1 432 aa17.38■□□□□ 0.37
SHKBP1-212ENST00000596163 TOR1BO14657 336 aa17.38■□□□□ 0.37
SHKBP1-212ENST00000596163 PGLSO95336 258 aa17.38■□□□□ 0.37
SHKBP1-212ENST00000596163 FTCDO95954 541 aa17.38■□□□□ 0.37
SHKBP1-212ENST00000596163 THEGLP0DJG4 465 aa17.38■□□□□ 0.37
SHKBP1-212ENST00000596163 PYGMP11217 842 aa17.38■□□□□ 0.37
SHKBP1-212ENST00000596163 PECAM1P16284 738 aaPredicted RBP17.38■□□□□ 0.37
SHKBP1-212ENST00000596163 ITIH2P19823 946 aa17.38■□□□□ 0.37
SHKBP1-212ENST00000596163 CSRP1P21291 193 aaKnown RBP17.38■□□□□ 0.37
SHKBP1-212ENST00000596163 MMP12P39900 470 aa17.38■□□□□ 0.37
SHKBP1-212ENST00000596163 RABIFP47224 123 aa17.38■□□□□ 0.37
SHKBP1-212ENST00000596163 ARRB1P49407 418 aaPredicted RBP17.38■□□□□ 0.37
SHKBP1-212ENST00000596163 LIG3P49916 1009 aa17.38■□□□□ 0.37
SHKBP1-212ENST00000596163 CCT8P50990 548 aa17.38■□□□□ 0.37
SHKBP1-212ENST00000596163 EPHB1P54762 984 aa17.38■□□□□ 0.37
SHKBP1-212ENST00000596163 RPL26P61254 145 aaKnown RBP17.38■□□□□ 0.37
SHKBP1-212ENST00000596163 DSC2Q02487 901 aa17.38■□□□□ 0.37
SHKBP1-212ENST00000596163 FGL2Q14314 439 aa17.38■□□□□ 0.37
SHKBP1-212ENST00000596163 PRKD1Q15139 912 aaPredicted RBP17.38■□□□□ 0.37
SHKBP1-212ENST00000596163 TEX44Q53QW1 395 aa17.38■□□□□ 0.37
SHKBP1-212ENST00000596163 USP45Q70EL2 814 aa17.38■□□□□ 0.37
SHKBP1-212ENST00000596163 ABI3BPQ7Z7G0 1075 aa17.38■□□□□ 0.37
SHKBP1-212ENST00000596163 ARRDC2Q8TBH0 407 aa17.38■□□□□ 0.37
SHKBP1-212ENST00000596163 HES6Q96HZ4 224 aa17.38■□□□□ 0.37
SHKBP1-212ENST00000596163 NSMCE3Q96MG7 304 aa17.38■□□□□ 0.37
SHKBP1-212ENST00000596163 VAT1Q99536 393 aa17.38■□□□□ 0.37
SHKBP1-212ENST00000596163 FZD3Q9NPG1 666 aa17.38■□□□□ 0.37
SHKBP1-212ENST00000596163 RPL26L1Q9UNX3 145 aaKnown RBP17.38■□□□□ 0.37
SHKBP1-212ENST00000596163 CAPN6Q9Y6Q1 641 aa17.38■□□□□ 0.37
SHKBP1-212ENST00000596163 CFAP54Q96N23 3096 aa17.37■□□□□ 0.37
SHKBP1-212ENST00000596163 H0Y8X5 98 aa17.37■□□□□ 0.37
SHKBP1-212ENST00000596163 ELFN1P0C7U0 828 aa17.37■□□□□ 0.37
SHKBP1-212ENST00000596163 C6P13671 934 aa17.37■□□□□ 0.37
SHKBP1-212ENST00000596163 ADCY2Q08462 1091 aa17.37■□□□□ 0.37
SHKBP1-212ENST00000596163 ZBTB17Q13105 803 aa17.37■□□□□ 0.37
SHKBP1-212ENST00000596163 AGERQ15109 404 aa17.37■□□□□ 0.37
SHKBP1-212ENST00000596163 KYAT3Q6YP21 454 aaKnown RBP17.37■□□□□ 0.37
SHKBP1-212ENST00000596163 GCNT7Q6ZNI0 430 aa17.37■□□□□ 0.37
SHKBP1-212ENST00000596163 Q6ZSR6 202 aa17.37■□□□□ 0.37
SHKBP1-212ENST00000596163 ERMP1Q7Z2K6 904 aa17.37■□□□□ 0.37
SHKBP1-212ENST00000596163 ZC3H18Q86VM9 953 aaKnown RBP17.37■□□□□ 0.37
SHKBP1-212ENST00000596163 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.37■□□□□ 0.37
SHKBP1-212ENST00000596163 CNTD1Q8N815 330 aa17.37■□□□□ 0.37
SHKBP1-212ENST00000596163 TTC13Q8NBP0 860 aa17.37■□□□□ 0.37
SHKBP1-212ENST00000596163 ALG3Q92685 438 aa17.37■□□□□ 0.37
SHKBP1-212ENST00000596163 HAUS1Q96CS2 278 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms