RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 SDHBP21912 280 aa25.94■■□□□ 1.74
TRIM28-204ENST00000594806 HNRNPA2B1P22626 353 aaKnown RBP25.94■■□□□ 1.74
TRIM28-204ENST00000594806 LIMK1P53667 647 aa25.94■■□□□ 1.74
TRIM28-204ENST00000594806 RPL26P61254 145 aaKnown RBP25.94■■□□□ 1.74
TRIM28-204ENST00000594806 OVGP1Q12889 678 aa25.94■■□□□ 1.74
TRIM28-204ENST00000594806 TRAF2Q12933 501 aa25.94■■□□□ 1.74
TRIM28-204ENST00000594806 SGCGQ13326 291 aa25.94■■□□□ 1.74
TRIM28-204ENST00000594806 TCEAL6Q6IPX3 200 aa25.94■■□□□ 1.74
TRIM28-204ENST00000594806 IL27RAQ6UWB1 636 aa25.94■■□□□ 1.74
TRIM28-204ENST00000594806 ZSWIM9Q86XI8 627 aa25.94■■□□□ 1.74
TRIM28-204ENST00000594806 PDCD6IPQ8WUM4 868 aaKnown RBP25.94■■□□□ 1.74
TRIM28-204ENST00000594806 TCEAL3Q969E4 200 aa25.94■■□□□ 1.74
TRIM28-204ENST00000594806 AGAP3Q96P47 875 aa25.94■■□□□ 1.74
TRIM28-204ENST00000594806 SLC25A51Q9H1U9 297 aa25.94■■□□□ 1.74
TRIM28-204ENST00000594806 TRHDEQ9UKU6 1024 aa25.94■■□□□ 1.74
TRIM28-204ENST00000594806 RPL26L1Q9UNX3 145 aaKnown RBP25.94■■□□□ 1.74
TRIM28-204ENST00000594806 PCDHB9Q9Y5E1 797 aa25.94■■□□□ 1.74
TRIM28-204ENST00000594806 VILLO15195 856 aa25.93■■□□□ 1.74
TRIM28-204ENST00000594806 FZD6O60353 706 aa25.93■■□□□ 1.74
TRIM28-204ENST00000594806 CPP00450 1065 aa25.93■■□□□ 1.74
TRIM28-204ENST00000594806 RBP3P10745 1247 aa25.93■■□□□ 1.74
TRIM28-204ENST00000594806 CD38P28907 300 aa25.93■■□□□ 1.74
TRIM28-204ENST00000594806 AKT2P31751 481 aa25.93■■□□□ 1.74
TRIM28-204ENST00000594806 MMP12P39900 470 aa25.93■■□□□ 1.74
TRIM28-204ENST00000594806 EIF3EP60228 445 aaKnown RBP25.93■■□□□ 1.74
TRIM28-204ENST00000594806 NIPAL4Q0D2K0 466 aa25.93■■□□□ 1.74
TRIM28-204ENST00000594806 STAT4Q14765 748 aa25.93■■□□□ 1.74
TRIM28-204ENST00000594806 SEL1L3Q68CR1 1132 aa25.93■■□□□ 1.74
TRIM28-204ENST00000594806 ADAT2Q7Z6V5 191 aaKnown RBP25.93■■□□□ 1.74
TRIM28-204ENST00000594806 IQCHQ86VS3 1027 aa25.93■■□□□ 1.74
TRIM28-204ENST00000594806 MFSD2AQ8NA29 543 aa25.93■■□□□ 1.74
TRIM28-204ENST00000594806 IMP4Q96G21 291 aaKnown RBP25.93■■□□□ 1.74
TRIM28-204ENST00000594806 LENG8Q96PV6 779 aaPredicted RBP25.93■■□□□ 1.74
TRIM28-204ENST00000594806 C1QTNF7Q9BXJ2 289 aa25.93■■□□□ 1.74
TRIM28-204ENST00000594806 FRMD8P1Q9BZ68 369 aaPredicted RBP25.93■■□□□ 1.74
TRIM28-204ENST00000594806 AASDHPPTQ9NRN7 309 aa25.93■■□□□ 1.74
TRIM28-204ENST00000594806 PPIL1Q9Y3C6 166 aa25.93■■□□□ 1.74
TRIM28-204ENST00000594806 JRKLQ9Y4A0 524 aa25.93■■□□□ 1.74
TRIM28-204ENST00000594806 HS3ST3A1Q9Y663 406 aa25.93■■□□□ 1.74
TRIM28-204ENST00000594806 PCDH15Q96QU1 1955 aa25.93■■□□□ 1.74
TRIM28-204ENST00000594806 SLC31A1O15431 190 aa25.92■■□□□ 1.74
TRIM28-204ENST00000594806 TM7SF2O76062 418 aa25.92■■□□□ 1.74
TRIM28-204ENST00000594806 ENGP17813 658 aa25.92■■□□□ 1.74
TRIM28-204ENST00000594806 WASHC5Q12768 1159 aa25.92■■□□□ 1.74
TRIM28-204ENST00000594806 TMEM145Q8NBT3 493 aa25.92■■□□□ 1.74
TRIM28-204ENST00000594806 DENND6BQ8NEG7 585 aa25.92■■□□□ 1.74
TRIM28-204ENST00000594806 NETO1Q8TDF5 533 aa25.92■■□□□ 1.74
TRIM28-204ENST00000594806 SLC6A18Q96N87 628 aa25.92■■□□□ 1.74
TRIM28-204ENST00000594806 EDEM2Q9BV94 578 aa25.92■■□□□ 1.74
TRIM28-204ENST00000594806 TLR10Q9BXR5 811 aa25.92■■□□□ 1.74
TRIM28-204ENST00000594806 TDRD1Q9BXT4 1180 aaKnown RBP25.92■■□□□ 1.74
TRIM28-204ENST00000594806 GLOD4Q9HC38 313 aa25.92■■□□□ 1.74
TRIM28-204ENST00000594806 GGT7Q9UJ14 662 aa25.92■■□□□ 1.74
TRIM28-204ENST00000594806 ITM2BQ9Y287 266 aa25.92■■□□□ 1.74
TRIM28-204ENST00000594806 KNL1Q8NG31 2342 aa25.91■■□□□ 1.74
TRIM28-204ENST00000594806 IGLON5A6NGN9 336 aa25.91■■□□□ 1.74
TRIM28-204ENST00000594806 KCNK3O14649 394 aa25.91■■□□□ 1.74
TRIM28-204ENST00000594806 STK10O94804 968 aaKnown RBP25.91■■□□□ 1.74
TRIM28-204ENST00000594806 CYP2A6P11509 494 aaPredicted RBP25.91■■□□□ 1.74
TRIM28-204ENST00000594806 CSNK1EP49674 416 aaKnown RBP25.91■■□□□ 1.74
TRIM28-204ENST00000594806 ATXN3P54252 364 aaPredicted RBP25.91■■□□□ 1.74
TRIM28-204ENST00000594806 FAM193AP78312 1265 aa25.91■■□□□ 1.74
TRIM28-204ENST00000594806 LRRC73Q5JTD7 316 aa25.91■■□□□ 1.74
TRIM28-204ENST00000594806 DARS2Q6PI48 645 aaKnown RBP25.91■■□□□ 1.74
TRIM28-204ENST00000594806 B4GALNT4Q76KP1 1039 aa25.91■■□□□ 1.74
TRIM28-204ENST00000594806 DPPA4Q7L190 304 aa25.91■■□□□ 1.74
TRIM28-204ENST00000594806 PIH1D2Q8WWB5 315 aa25.91■■□□□ 1.74
TRIM28-204ENST00000594806 SCRN2Q96FV2 425 aa25.91■■□□□ 1.74
TRIM28-204ENST00000594806 KLHL8Q9P2G9 620 aaPredicted RBP25.91■■□□□ 1.74
TRIM28-204ENST00000594806 SLCO1B1Q9Y6L6 691 aa25.91■■□□□ 1.74
TRIM28-204ENST00000594806 ADAMTS9Q9P2N4 1935 aa25.9■■□□□ 1.74
TRIM28-204ENST00000594806 A0A1W2PR77 199 aa25.9■■□□□ 1.74
TRIM28-204ENST00000594806 KIF5CO60282 957 aa25.9■■□□□ 1.74
TRIM28-204ENST00000594806 PAK4O96013 591 aaPredicted RBP25.9■■□□□ 1.74
TRIM28-204ENST00000594806 MMP2P08253 660 aa25.9■■□□□ 1.74
TRIM28-204ENST00000594806 RBL1P28749 1068 aa25.9■■□□□ 1.74
TRIM28-204ENST00000594806 CD86P42081 329 aa25.9■■□□□ 1.74
TRIM28-204ENST00000594806 C21orf59P57076 290 aa25.9■■□□□ 1.74
TRIM28-204ENST00000594806 SKOR1P84550 965 aa25.9■■□□□ 1.74
TRIM28-204ENST00000594806 AGERQ15109 404 aa25.9■■□□□ 1.74
TRIM28-204ENST00000594806 USP45Q70EL2 814 aa25.9■■□□□ 1.74
TRIM28-204ENST00000594806 PID1Q7Z2X4 250 aa25.9■■□□□ 1.74
TRIM28-204ENST00000594806 SLC13A5Q86YT5 568 aaPredicted RBP25.9■■□□□ 1.74
TRIM28-204ENST00000594806 MAIP1Q8WWC4 291 aa25.9■■□□□ 1.74
TRIM28-204ENST00000594806 TADA1Q96BN2 335 aa25.9■■□□□ 1.74
TRIM28-204ENST00000594806 CEP41Q9BYV8 373 aa25.9■■□□□ 1.74
TRIM28-204ENST00000594806 TMEM9BQ9NQ34 198 aa25.9■■□□□ 1.74
TRIM28-204ENST00000594806 KCTD5Q9NXV2 234 aa25.9■■□□□ 1.74
TRIM28-204ENST00000594806 DNPEPQ9ULA0 475 aa25.9■■□□□ 1.74
TRIM28-204ENST00000594806 LRRK1Q38SD2 2015 aa25.89■■□□□ 1.74
TRIM28-204ENST00000594806 MMP20O60882 483 aa25.89■■□□□ 1.74
TRIM28-204ENST00000594806 PRLRP16471 622 aa25.89■■□□□ 1.74
TRIM28-204ENST00000594806 ITIH2P19823 946 aa25.89■■□□□ 1.74
TRIM28-204ENST00000594806 EPHB1P54762 984 aa25.89■■□□□ 1.74
TRIM28-204ENST00000594806 GRIK2Q13002 908 aa25.89■■□□□ 1.74
TRIM28-204ENST00000594806 FGL2Q14314 439 aa25.89■■□□□ 1.74
TRIM28-204ENST00000594806 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP25.89■■□□□ 1.74
TRIM28-204ENST00000594806 KLK6Q92876 244 aa25.89■■□□□ 1.74
TRIM28-204ENST00000594806 MCCC1Q96RQ3 725 aaPredicted RBP25.89■■□□□ 1.74
TRIM28-204ENST00000594806 WRAP53Q9BUR4 548 aaKnown RBP25.89■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms