RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 SLC32A1Q9H598 525 aa18.8■□□□□ 0.6
PPP4R1-215ENST00000580182 BTBD3Q9Y2F9 522 aa18.8■□□□□ 0.6
PPP4R1-215ENST00000580182 TTLL3Q9Y4R7 772 aa18.8■□□□□ 0.6
PPP4R1-215ENST00000580182 HS3ST3A1Q9Y663 406 aa18.8■□□□□ 0.6
PPP4R1-215ENST00000580182 SPAARA0A1B0GVQ0 90 aa18.79■□□□□ 0.6
PPP4R1-215ENST00000580182 MACROD2A1Z1Q3 448 aa18.79■□□□□ 0.6
PPP4R1-215ENST00000580182 GRID2IPA4D2P6 1211 aa18.79■□□□□ 0.6
PPP4R1-215ENST00000580182 A8MX80 341 aa18.79■□□□□ 0.6
PPP4R1-215ENST00000580182 HTRA2O43464 458 aaPredicted RBP18.79■□□□□ 0.6
PPP4R1-215ENST00000580182 CST8O60676 142 aa18.79■□□□□ 0.6
PPP4R1-215ENST00000580182 TM7SF2O76062 418 aa18.79■□□□□ 0.6
PPP4R1-215ENST00000580182 ZRANB2O95218 330 aaKnown RBP eCLIP18.79■□□□□ 0.6
PPP4R1-215ENST00000580182 JCHAINP01591 159 aa18.79■□□□□ 0.6
PPP4R1-215ENST00000580182 PECAM1P16284 738 aaPredicted RBP18.79■□□□□ 0.6
PPP4R1-215ENST00000580182 ZFXP17010 805 aaPredicted RBP18.79■□□□□ 0.6
PPP4R1-215ENST00000580182 LIG3P49916 1009 aa18.79■□□□□ 0.6
PPP4R1-215ENST00000580182 SUOXP51687 545 aa18.79■□□□□ 0.6
PPP4R1-215ENST00000580182 AP1B1Q10567 949 aa18.79■□□□□ 0.6
PPP4R1-215ENST00000580182 OVGP1Q12889 678 aa18.79■□□□□ 0.6
PPP4R1-215ENST00000580182 RALGDSQ12967 914 aa18.79■□□□□ 0.6
PPP4R1-215ENST00000580182 BNIP3Q12983 259 aa18.79■□□□□ 0.6
PPP4R1-215ENST00000580182 ZBTB17Q13105 803 aa18.79■□□□□ 0.6
PPP4R1-215ENST00000580182 PTPRRQ15256 657 aa18.79■□□□□ 0.6
PPP4R1-215ENST00000580182 ERAP2Q6P179 960 aa18.79■□□□□ 0.6
PPP4R1-215ENST00000580182 DBX2Q6ZNG2 339 aa18.79■□□□□ 0.6
PPP4R1-215ENST00000580182 Q6ZSR6 202 aa18.79■□□□□ 0.6
PPP4R1-215ENST00000580182 GATAD2AQ86YP4 633 aa18.79■□□□□ 0.6
PPP4R1-215ENST00000580182 CCDC50Q8IVM0 306 aa18.79■□□□□ 0.6
PPP4R1-215ENST00000580182 RCOR2Q8IZ40 523 aa18.79■□□□□ 0.6
PPP4R1-215ENST00000580182 LRRC57Q8N9N7 239 aa18.79■□□□□ 0.6
PPP4R1-215ENST00000580182 SETD7Q8WTS6 366 aaKnown RBP18.79■□□□□ 0.6
PPP4R1-215ENST00000580182 ASB12Q8WXK4 309 aa18.79■□□□□ 0.6
PPP4R1-215ENST00000580182 CENPTQ96BT3 561 aa18.79■□□□□ 0.6
PPP4R1-215ENST00000580182 OLFM3Q96PB7 478 aa18.79■□□□□ 0.6
PPP4R1-215ENST00000580182 LENG8Q96PV6 779 aaPredicted RBP18.79■□□□□ 0.6
PPP4R1-215ENST00000580182 POLR1EQ9GZS1 481 aaKnown RBP18.79■□□□□ 0.6
PPP4R1-215ENST00000580182 MBNL1Q9NR56 388 aaKnown RBP18.79■□□□□ 0.6
PPP4R1-215ENST00000580182 PCDHGB2Q9Y5G2 931 aa18.79■□□□□ 0.6
PPP4R1-215ENST00000580182 LRRK1Q38SD2 2015 aa18.79■□□□□ 0.6
PPP4R1-215ENST00000580182 CNOT1A5YKK6 2376 aaKnown RBP18.78■□□□□ 0.6
PPP4R1-215ENST00000580182 hCG_1818297A0A087WSY0 165 aa18.78■□□□□ 0.6
PPP4R1-215ENST00000580182 SOCS5O75159 536 aa18.78■□□□□ 0.6
PPP4R1-215ENST00000580182 C6P13671 934 aa18.78■□□□□ 0.6
PPP4R1-215ENST00000580182 CTNNA1P35221 906 aaKnown RBP18.78■□□□□ 0.6
PPP4R1-215ENST00000580182 GSDMDP57764 484 aa18.78■□□□□ 0.6
PPP4R1-215ENST00000580182 NIPAL4Q0D2K0 466 aa18.78■□□□□ 0.6
PPP4R1-215ENST00000580182 TFDP3Q5H9I0 405 aa18.78■□□□□ 0.6
PPP4R1-215ENST00000580182 TPRG1LQ5T0D9 272 aa18.78■□□□□ 0.6
PPP4R1-215ENST00000580182 PTAR1Q7Z6K3 402 aaPredicted RBP18.78■□□□□ 0.6
PPP4R1-215ENST00000580182 ZSCAN30Q86W11 494 aa18.78■□□□□ 0.6
PPP4R1-215ENST00000580182 TP53I13Q8NBR0 393 aaPredicted RBP18.78■□□□□ 0.6
PPP4R1-215ENST00000580182 EXD1Q8NHP7 514 aa18.78■□□□□ 0.6
PPP4R1-215ENST00000580182 ARRDC2Q8TBH0 407 aa18.78■□□□□ 0.6
PPP4R1-215ENST00000580182 KIAA1524Q8TCG1 905 aa18.78■□□□□ 0.6
PPP4R1-215ENST00000580182 CEP41Q9BYV8 373 aa18.78■□□□□ 0.6
PPP4R1-215ENST00000580182 ERVMER34-1Q9H9K5 563 aa18.78■□□□□ 0.6
PPP4R1-215ENST00000580182 PCOLCE2Q9UKZ9 415 aa18.78■□□□□ 0.6
PPP4R1-215ENST00000580182 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.78■□□□□ 0.6
PPP4R1-215ENST00000580182 PCDHB9Q9Y5E1 797 aa18.78■□□□□ 0.6
PPP4R1-215ENST00000580182 RAI2Q9Y5P3 530 aa18.78■□□□□ 0.6
PPP4R1-215ENST00000580182 SPTBN2O15020 2390 aa18.78■□□□□ 0.6
PPP4R1-215ENST00000580182 GOLGA8CPA6NN73 597 aa18.77■□□□□ 0.6
PPP4R1-215ENST00000580182 A6NNZ2 444 aa18.77■□□□□ 0.6
PPP4R1-215ENST00000580182 FPGTO14772 594 aa18.77■□□□□ 0.6
PPP4R1-215ENST00000580182 DFNA5O60443 496 aa18.77■□□□□ 0.6
PPP4R1-215ENST00000580182 MAGEC1O60732 1142 aa18.77■□□□□ 0.6
PPP4R1-215ENST00000580182 CBFA2T3O75081 653 aa18.77■□□□□ 0.6
PPP4R1-215ENST00000580182 CPP00450 1065 aa18.77■□□□□ 0.6
PPP4R1-215ENST00000580182 PDHA1P08559 390 aa18.77■□□□□ 0.6
PPP4R1-215ENST00000580182 IGFALSP35858 605 aa18.77■□□□□ 0.6
PPP4R1-215ENST00000580182 POLR2LP62875 67 aaKnown RBP18.77■□□□□ 0.6
PPP4R1-215ENST00000580182 KIF5AQ12840 1032 aa18.77■□□□□ 0.6
PPP4R1-215ENST00000580182 TFDP2Q14188 446 aa18.77■□□□□ 0.6
PPP4R1-215ENST00000580182 PDK1Q15118 436 aa18.77■□□□□ 0.6
PPP4R1-215ENST00000580182 RALGPS1Q5JS13 557 aa18.77■□□□□ 0.6
PPP4R1-215ENST00000580182 ALG1LQ6GMV1 187 aa18.77■□□□□ 0.6
PPP4R1-215ENST00000580182 KYAT3Q6YP21 454 aaKnown RBP18.77■□□□□ 0.6
PPP4R1-215ENST00000580182 CNTD1Q8N815 330 aa18.77■□□□□ 0.6
PPP4R1-215ENST00000580182 HAUS1Q96CS2 278 aa18.77■□□□□ 0.6
PPP4R1-215ENST00000580182 CALR3Q96L12 384 aaKnown RBP18.77■□□□□ 0.6
PPP4R1-215ENST00000580182 SMIM14Q96QK8 99 aa18.77■□□□□ 0.6
PPP4R1-215ENST00000580182 IL12RB2Q99665 862 aa18.77■□□□□ 0.6
PPP4R1-215ENST00000580182 HERPUD2Q9BSE4 406 aa18.77■□□□□ 0.6
PPP4R1-215ENST00000580182 HEMGNQ9BXL5 484 aa18.77■□□□□ 0.6
PPP4R1-215ENST00000580182 B4GALT6Q9UBX8 382 aa18.77■□□□□ 0.6
PPP4R1-215ENST00000580182 PCDHA3Q9Y5H8 950 aa18.77■□□□□ 0.6
PPP4R1-215ENST00000580182 PCDHGA12O60330 932 aa18.76■□□□□ 0.59
PPP4R1-215ENST00000580182 SDC3O75056 442 aa18.76■□□□□ 0.59
PPP4R1-215ENST00000580182 NEBLO76041 1014 aa18.76■□□□□ 0.59
PPP4R1-215ENST00000580182 PGLSO95336 258 aa18.76■□□□□ 0.59
PPP4R1-215ENST00000580182 ADRB1P08588 477 aa18.76■□□□□ 0.59
PPP4R1-215ENST00000580182 CTNNA2P26232 953 aa18.76■□□□□ 0.59
PPP4R1-215ENST00000580182 EPHA8P29322 1005 aaPredicted RBP18.76■□□□□ 0.59
PPP4R1-215ENST00000580182 PEX5P50542 639 aa18.76■□□□□ 0.59
PPP4R1-215ENST00000580182 IFI35P80217 286 aaPredicted RBP18.76■□□□□ 0.59
PPP4R1-215ENST00000580182 SUZ12Q15022 739 aaKnown RBP18.76■□□□□ 0.59
PPP4R1-215ENST00000580182 IRF4Q15306 451 aa18.76■□□□□ 0.59
PPP4R1-215ENST00000580182 ZNF542PQ5EBM4 170 aa18.76■□□□□ 0.59
PPP4R1-215ENST00000580182 AADACL2Q6P093 401 aa18.76■□□□□ 0.59
PPP4R1-215ENST00000580182 LIPIQ6XZB0 460 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms