RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 F9P00740 461 aa13.74□□□□□ -0.21
NDEL1-204ENST00000578172 GEMP55040 296 aa13.74□□□□□ -0.21
NDEL1-204ENST00000578172 ZRANB3Q5FWF4 1079 aa13.74□□□□□ -0.21
NDEL1-204ENST00000578172 OR10T2Q8NGX3 314 aa13.74□□□□□ -0.21
NDEL1-204ENST00000578172 SH3RF2Q8TEC5 729 aa13.74□□□□□ -0.21
NDEL1-204ENST00000578172 CENPIQ92674 756 aaPredicted RBP13.74□□□□□ -0.21
NDEL1-204ENST00000578172 GATA6Q92908 595 aa13.74□□□□□ -0.21
NDEL1-204ENST00000578172 VPS50Q96JG6 964 aa13.74□□□□□ -0.21
NDEL1-204ENST00000578172 CDK15Q96Q40 435 aa13.74□□□□□ -0.21
NDEL1-204ENST00000578172 APOL5Q9BWW9 433 aa13.74□□□□□ -0.21
NDEL1-204ENST00000578172 MARCH4Q9P2E8 410 aaPredicted RBP13.74□□□□□ -0.21
NDEL1-204ENST00000578172 AP4S1Q9Y587 144 aa13.74□□□□□ -0.21
NDEL1-204ENST00000578172 MATN2O00339 956 aa13.73□□□□□ -0.21
NDEL1-204ENST00000578172 STRNO43815 780 aa13.73□□□□□ -0.21
NDEL1-204ENST00000578172 RNASEH2AO75792 299 aaKnown RBP13.73□□□□□ -0.21
NDEL1-204ENST00000578172 CABYRO75952 493 aa13.73□□□□□ -0.21
NDEL1-204ENST00000578172 MTHFD1P11586 935 aaKnown RBP13.73□□□□□ -0.21
NDEL1-204ENST00000578172 YAP1P46937 504 aaKnown RBP13.73□□□□□ -0.21
NDEL1-204ENST00000578172 RAB27AP51159 221 aa13.73□□□□□ -0.21
NDEL1-204ENST00000578172 NRG1Q02297 640 aaPredicted RBP13.73□□□□□ -0.21
NDEL1-204ENST00000578172 LBRQ14739 615 aaKnown RBP13.73□□□□□ -0.21
NDEL1-204ENST00000578172 PLCL1Q15111 1095 aa13.73□□□□□ -0.21
NDEL1-204ENST00000578172 ALFQ53S48 1182 aa13.73□□□□□ -0.21
NDEL1-204ENST00000578172 ZYG11AQ6WRX3 759 aa13.73□□□□□ -0.21
NDEL1-204ENST00000578172 NUDT8Q8WV74 236 aa13.73□□□□□ -0.21
NDEL1-204ENST00000578172 SIKE1Q9BRV8 207 aa13.73□□□□□ -0.21
NDEL1-204ENST00000578172 RTKNQ9BST9 563 aa13.73□□□□□ -0.21
NDEL1-204ENST00000578172 TNFRSF12AQ9NP84 129 aa13.73□□□□□ -0.21
NDEL1-204ENST00000578172 TRHDEQ9UKU6 1024 aa13.73□□□□□ -0.21
NDEL1-204ENST00000578172 PADI3Q9ULW8 664 aa13.73□□□□□ -0.21
NDEL1-204ENST00000578172 PSMD13Q9UNM6 376 aa13.73□□□□□ -0.21
NDEL1-204ENST00000578172 CBX4O00257 560 aa13.73□□□□□ -0.21
NDEL1-204ENST00000578172 GRID2O43424 1007 aa13.73□□□□□ -0.21
NDEL1-204ENST00000578172 DPP6P42658 865 aa13.73□□□□□ -0.21
NDEL1-204ENST00000578172 C1QTNF8P60827 252 aa13.73□□□□□ -0.21
NDEL1-204ENST00000578172 TBCELQ5QJ74 424 aa13.73□□□□□ -0.21
NDEL1-204ENST00000578172 RAB44Q7Z6P3 723 aaPredicted RBP13.73□□□□□ -0.21
NDEL1-204ENST00000578172 HERC6Q8IVU3 1022 aa13.73□□□□□ -0.21
NDEL1-204ENST00000578172 JADE3Q92613 823 aa13.73□□□□□ -0.21
NDEL1-204ENST00000578172 FBXO32Q969P5 355 aa13.73□□□□□ -0.21
NDEL1-204ENST00000578172 LRCH3Q96II8 777 aa13.73□□□□□ -0.21
NDEL1-204ENST00000578172 KLHL32Q96NJ5 620 aa13.73□□□□□ -0.21
NDEL1-204ENST00000578172 NFKBIZQ9BYH8 718 aa13.73□□□□□ -0.21
NDEL1-204ENST00000578172 CASS4Q9NQ75 786 aa13.73□□□□□ -0.21
NDEL1-204ENST00000578172 BCAP29Q9UHQ4 241 aa13.73□□□□□ -0.21
NDEL1-204ENST00000578172 USP3Q9Y6I4 520 aa13.73□□□□□ -0.21
NDEL1-204ENST00000578172 CPT1AP50416 773 aa13.73□□□□□ -0.21
NDEL1-204ENST00000578172 CCNG1P51959 295 aa13.73□□□□□ -0.21
NDEL1-204ENST00000578172 ZBTB6Q15916 424 aa13.73□□□□□ -0.21
NDEL1-204ENST00000578172 NADK2Q4G0N4 442 aa13.73□□□□□ -0.21
NDEL1-204ENST00000578172 LINGO4Q6UY18 593 aa13.73□□□□□ -0.21
NDEL1-204ENST00000578172 TMEM135Q86UB9 458 aa13.73□□□□□ -0.21
NDEL1-204ENST00000578172 ZNF598Q86UK7 904 aaKnown RBP13.73□□□□□ -0.21
NDEL1-204ENST00000578172 SHCBP1Q8NEM2 672 aa13.73□□□□□ -0.21
NDEL1-204ENST00000578172 ACOX2Q99424 681 aa13.73□□□□□ -0.21
NDEL1-204ENST00000578172 SLC38A7Q9NVC3 462 aa13.73□□□□□ -0.21
NDEL1-204ENST00000578172 GMIPQ9P107 970 aa13.73□□□□□ -0.21
NDEL1-204ENST00000578172 SMIM35A0A1B0GVV1 85 aa13.72□□□□□ -0.21
NDEL1-204ENST00000578172 HEATR9A2RTY3 570 aa13.72□□□□□ -0.21
NDEL1-204ENST00000578172 E9PAM4 449 aa13.72□□□□□ -0.21
NDEL1-204ENST00000578172 ENPP3O14638 875 aa13.72□□□□□ -0.21
NDEL1-204ENST00000578172 FBXO21O94952 628 aa13.72□□□□□ -0.21
NDEL1-204ENST00000578172 ACVRL1P37023 503 aa13.72□□□□□ -0.21
NDEL1-204ENST00000578172 GRIA2P42262 883 aa13.72□□□□□ -0.21
NDEL1-204ENST00000578172 SERPINH1P50454 418 aaKnown RBP13.72□□□□□ -0.21
NDEL1-204ENST00000578172 TIFABQ6ZNK6 161 aa13.72□□□□□ -0.21
NDEL1-204ENST00000578172 RALGPS2Q86X27 583 aaPredicted RBP13.72□□□□□ -0.21
NDEL1-204ENST00000578172 THAP11Q96EK4 314 aa13.72□□□□□ -0.21
NDEL1-204ENST00000578172 ANKRD27Q96NW4 1050 aa13.72□□□□□ -0.21
NDEL1-204ENST00000578172 SPATA16Q9BXB7 569 aa13.72□□□□□ -0.21
NDEL1-204ENST00000578172 TRMT13Q9NUP7 481 aaKnown RBP13.72□□□□□ -0.21
NDEL1-204ENST00000578172 EVLQ9UI08 416 aaPredicted RBP13.72□□□□□ -0.21
NDEL1-204ENST00000578172 ZMYM5Q9UJ78 669 aa13.72□□□□□ -0.21
NDEL1-204ENST00000578172 RPL26L1Q9UNX3 145 aaKnown RBP13.72□□□□□ -0.21
NDEL1-204ENST00000578172 ARHGAP10A1A4S6 786 aa13.72□□□□□ -0.21
NDEL1-204ENST00000578172 RTN3O95197 1032 aaPredicted RBP13.72□□□□□ -0.21
NDEL1-204ENST00000578172 HARS2P49590 506 aaKnown RBP13.72□□□□□ -0.21
NDEL1-204ENST00000578172 TBX4P57082 545 aa13.72□□□□□ -0.21
NDEL1-204ENST00000578172 CDKL1Q00532 357 aa13.72□□□□□ -0.21
NDEL1-204ENST00000578172 PAFAH1B3Q15102 231 aaKnown RBP13.72□□□□□ -0.21
NDEL1-204ENST00000578172 NEDD8Q15843 81 aa13.72□□□□□ -0.21
NDEL1-204ENST00000578172 HECTD2Q5U5R9 776 aa13.72□□□□□ -0.21
NDEL1-204ENST00000578172 MFSD6LQ8IWD5 586 aa13.72□□□□□ -0.21
NDEL1-204ENST00000578172 TOP6BLQ8N6T0 577 aa13.72□□□□□ -0.21
NDEL1-204ENST00000578172 FAM47BQ8NA70 645 aa13.72□□□□□ -0.21
NDEL1-204ENST00000578172 DRC3Q9H069 523 aa13.72□□□□□ -0.21
NDEL1-204ENST00000578172 OCEL1Q9H607 264 aa13.72□□□□□ -0.21
NDEL1-204ENST00000578172 TRAF6Q9Y4K3 522 aa13.72□□□□□ -0.21
NDEL1-204ENST00000578172 E5RI56 91 aa13.72□□□□□ -0.21
NDEL1-204ENST00000578172 H3BSA7 217 aa13.72□□□□□ -0.21
NDEL1-204ENST00000578172 AGRPO00253 132 aa13.72□□□□□ -0.21
NDEL1-204ENST00000578172 MTSS1O43312 755 aa13.72□□□□□ -0.21
NDEL1-204ENST00000578172 FAM58BPP0C7Q3 252 aa13.72□□□□□ -0.21
NDEL1-204ENST00000578172 CRYBB1P53674 252 aaPredicted RBP13.72□□□□□ -0.21
NDEL1-204ENST00000578172 MTTPP55157 894 aa13.72□□□□□ -0.21
NDEL1-204ENST00000578172 DTNBP1Q96EV8 351 aa13.72□□□□□ -0.21
NDEL1-204ENST00000578172 STK39Q9UEW8 545 aa13.72□□□□□ -0.21
NDEL1-204ENST00000578172 CROTQ9UKG9 612 aa13.72□□□□□ -0.21
NDEL1-204ENST00000578172 RNF112Q9ULX5 631 aa13.72□□□□□ -0.21
NDEL1-204ENST00000578172 A8MT66 165 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms