RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 PLPP6Q8IY26 295 aa15.85■□□□□ 0.13
USB1-208ENST00000563207 SLC22A18ASQ8N1D0 253 aa15.85■□□□□ 0.13
USB1-208ENST00000563207 OR13H1Q8NG92 308 aa15.85■□□□□ 0.13
USB1-208ENST00000563207 SKA1Q96BD8 255 aa15.85■□□□□ 0.13
USB1-208ENST00000563207 CELF6Q96J87 481 aaKnown RBP15.85■□□□□ 0.13
USB1-208ENST00000563207 CCDC114Q96M63 670 aa15.85■□□□□ 0.13
USB1-208ENST00000563207 ZNF599Q96NL3 588 aa15.85■□□□□ 0.13
USB1-208ENST00000563207 TM6SF2Q9BZW4 377 aa15.85■□□□□ 0.13
USB1-208ENST00000563207 ERVMER34-1Q9H9K5 563 aa15.85■□□□□ 0.13
USB1-208ENST00000563207 PREBQ9HCU5 417 aa15.85■□□□□ 0.13
USB1-208ENST00000563207 GGT7Q9UJ14 662 aa15.85■□□□□ 0.13
USB1-208ENST00000563207 LHX6Q9UPM6 363 aa15.85■□□□□ 0.13
USB1-208ENST00000563207 DMTF1Q9Y222 760 aa15.85■□□□□ 0.13
USB1-208ENST00000563207 GPSM3Q9Y4H4 160 aa15.85■□□□□ 0.13
USB1-208ENST00000563207 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.85■□□□□ 0.13
USB1-208ENST00000563207 ANKRD11Q6UB99 2663 aaPredicted RBP15.84■□□□□ 0.13
USB1-208ENST00000563207 hCG_1818297A0A087WSY0 165 aa15.84■□□□□ 0.13
USB1-208ENST00000563207 PRAMEF26H0Y7S4 382 aa15.84■□□□□ 0.13
USB1-208ENST00000563207 DFFAO00273 331 aa15.84■□□□□ 0.13
USB1-208ENST00000563207 DDX3YO15523 660 aaKnown RBP15.84■□□□□ 0.13
USB1-208ENST00000563207 KIF5CO60282 957 aa15.84■□□□□ 0.13
USB1-208ENST00000563207 PRAMEF11O60813 436 aa15.84■□□□□ 0.13
USB1-208ENST00000563207 PCDH8O95206 1070 aa15.84■□□□□ 0.13
USB1-208ENST00000563207 THEGLP0DJG4 465 aa15.84■□□□□ 0.13
USB1-208ENST00000563207 TGM2P21980 687 aa15.84■□□□□ 0.13
USB1-208ENST00000563207 ARRB1P49407 418 aaPredicted RBP15.84■□□□□ 0.13
USB1-208ENST00000563207 CCNHP51946 323 aaPredicted RBP15.84■□□□□ 0.13
USB1-208ENST00000563207 GALNT2Q10471 571 aa15.84■□□□□ 0.13
USB1-208ENST00000563207 RPS6KA1Q15418 735 aa15.84■□□□□ 0.13
USB1-208ENST00000563207 HS1BP3Q53T59 392 aa15.84■□□□□ 0.13
USB1-208ENST00000563207 SLC45A4Q5BKX6 768 aa15.84■□□□□ 0.13
USB1-208ENST00000563207 CARD16Q5EG05 197 aa15.84■□□□□ 0.13
USB1-208ENST00000563207 HORMAD1Q86X24 394 aa15.84■□□□□ 0.13
USB1-208ENST00000563207 RFX6Q8HWS3 928 aa15.84■□□□□ 0.13
USB1-208ENST00000563207 PCDH20Q8N6Y1 951 aaKnown RBP15.84■□□□□ 0.13
USB1-208ENST00000563207 PLD5Q8N7P1 536 aa15.84■□□□□ 0.13
USB1-208ENST00000563207 HNRNPLLQ8WVV9 542 aaKnown RBP15.84■□□□□ 0.13
USB1-208ENST00000563207 ALG3Q92685 438 aa15.84■□□□□ 0.13
USB1-208ENST00000563207 FATE1Q969F0 183 aa15.84■□□□□ 0.13
USB1-208ENST00000563207 KLHDC7BQ96G42 594 aa15.84■□□□□ 0.13
USB1-208ENST00000563207 CRELD1Q96HD1 420 aa15.84■□□□□ 0.13
USB1-208ENST00000563207 BRD8Q9H0E9 1235 aa15.84■□□□□ 0.13
USB1-208ENST00000563207 SP110Q9HB58 689 aa15.84■□□□□ 0.13
USB1-208ENST00000563207 IPO11Q9UI26 975 aaKnown RBP15.84■□□□□ 0.13
USB1-208ENST00000563207 ITM2BQ9Y287 266 aa15.84■□□□□ 0.13
USB1-208ENST00000563207 JRKLQ9Y4A0 524 aa15.84■□□□□ 0.13
USB1-208ENST00000563207 FARP1Q9Y4F1 1045 aaPredicted RBP15.84■□□□□ 0.13
USB1-208ENST00000563207 SHROOM3Q8TF72 1996 aa15.84■□□□□ 0.13
USB1-208ENST00000563207 CST8O60676 142 aa15.83■□□□□ 0.12
USB1-208ENST00000563207 TJP3O95049 919 aa15.83■□□□□ 0.12
USB1-208ENST00000563207 PRNPP04156 253 aa15.83■□□□□ 0.12
USB1-208ENST00000563207 ITIH2P19823 946 aa15.83■□□□□ 0.12
USB1-208ENST00000563207 GARSP41250 739 aaKnown RBP15.83■□□□□ 0.12
USB1-208ENST00000563207 COL28A1Q2UY09 1125 aa15.83■□□□□ 0.12
USB1-208ENST00000563207 TMEM259Q4ZIN3 620 aa15.83■□□□□ 0.12
USB1-208ENST00000563207 LRRC73Q5JTD7 316 aa15.83■□□□□ 0.12
USB1-208ENST00000563207 TPRG1LQ5T0D9 272 aa15.83■□□□□ 0.12
USB1-208ENST00000563207 ATXN7L2Q5T6C5 722 aaPredicted RBP15.83■□□□□ 0.12
USB1-208ENST00000563207 TIGD7Q6NT04 549 aaPredicted RBP15.83■□□□□ 0.12
USB1-208ENST00000563207 GCNT7Q6ZNI0 430 aa15.83■□□□□ 0.12
USB1-208ENST00000563207 PARS2Q7L3T8 475 aaKnown RBP15.83■□□□□ 0.12
USB1-208ENST00000563207 ATPAF2Q8N5M1 289 aa15.83■□□□□ 0.12
USB1-208ENST00000563207 NSMCE1Q8WV22 266 aa15.83■□□□□ 0.12
USB1-208ENST00000563207 BMFQ96LC9 184 aa15.83■□□□□ 0.12
USB1-208ENST00000563207 TSGA13Q96PP4 275 aa15.83■□□□□ 0.12
USB1-208ENST00000563207 HEPHQ9BQS7 1158 aa15.83■□□□□ 0.12
USB1-208ENST00000563207 HDAC8Q9BY41 377 aa15.83■□□□□ 0.12
USB1-208ENST00000563207 OSBPL8Q9BZF1 889 aa15.83■□□□□ 0.12
USB1-208ENST00000563207 CARD9Q9H257 536 aa15.83■□□□□ 0.12
USB1-208ENST00000563207 ZDHHC6Q9H6R6 413 aa15.83■□□□□ 0.12
USB1-208ENST00000563207 PDFQ9HBH1 243 aa15.83■□□□□ 0.12
USB1-208ENST00000563207 TRMT1Q9NXH9 659 aaKnown RBP15.83■□□□□ 0.12
USB1-208ENST00000563207 DTLQ9NZJ0 730 aa15.83■□□□□ 0.12
USB1-208ENST00000563207 HECAQ9UBI9 543 aaPredicted RBP15.83■□□□□ 0.12
USB1-208ENST00000563207 UBA2Q9UBT2 640 aaPredicted RBP15.83■□□□□ 0.12
USB1-208ENST00000563207 PYCARDQ9ULZ3 195 aa15.83■□□□□ 0.12
USB1-208ENST00000563207 PACSIN2Q9UNF0 486 aaPredicted RBP15.83■□□□□ 0.12
USB1-208ENST00000563207 FADS3Q9Y5Q0 445 aa15.83■□□□□ 0.12
USB1-208ENST00000563207 TRPM6Q9BX84 2022 aa15.83■□□□□ 0.12
USB1-208ENST00000563207 BPTFQ12830 3046 aa15.83■□□□□ 0.12
USB1-208ENST00000563207 POM121BA6NF01 834 aa15.82■□□□□ 0.12
USB1-208ENST00000563207 SPINT1O43278 529 aa15.82■□□□□ 0.12
USB1-208ENST00000563207 SIGLEC6O43699 453 aa15.82■□□□□ 0.12
USB1-208ENST00000563207 MFSD11O43934 449 aa15.82■□□□□ 0.12
USB1-208ENST00000563207 MAFKO60675 156 aa15.82■□□□□ 0.12
USB1-208ENST00000563207 PAK4O96013 591 aaPredicted RBP15.82■□□□□ 0.12
USB1-208ENST00000563207 GIMD1P0DJR0 217 aa15.82■□□□□ 0.12
USB1-208ENST00000563207 PYGMP11217 842 aa15.82■□□□□ 0.12
USB1-208ENST00000563207 ADRB3P13945 408 aa15.82■□□□□ 0.12
USB1-208ENST00000563207 CCNCP24863 283 aa15.82■□□□□ 0.12
USB1-208ENST00000563207 ABL2P42684 1182 aa15.82■□□□□ 0.12
USB1-208ENST00000563207 RECQLP46063 649 aaPredicted RBP15.82■□□□□ 0.12
USB1-208ENST00000563207 PDK1Q15118 436 aa15.82■□□□□ 0.12
USB1-208ENST00000563207 INAVAQ3KP66 663 aa15.82■□□□□ 0.12
USB1-208ENST00000563207 KAZNQ674X7 775 aa15.82■□□□□ 0.12
USB1-208ENST00000563207 BBS12Q6ZW61 710 aa15.82■□□□□ 0.12
USB1-208ENST00000563207 IQCHQ86VS3 1027 aa15.82■□□□□ 0.12
USB1-208ENST00000563207 BBS5Q8N3I7 341 aa15.82■□□□□ 0.12
USB1-208ENST00000563207 GALNT15Q8N3T1 639 aa15.82■□□□□ 0.12
USB1-208ENST00000563207 HDAC11Q96DB2 347 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms