RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 NUP210Q8TEM1 1887 aaPredicted RBP13.87□□□□□ -0.19
TPM1-215ENST00000558868 CCDC78A2IDD5 438 aa13.86□□□□□ -0.19
TPM1-215ENST00000558868 LDB2O43679 373 aa13.86□□□□□ -0.19
TPM1-215ENST00000558868 GLRA3O75311 464 aa13.86□□□□□ -0.19
TPM1-215ENST00000558868 GJB3O75712 270 aa13.86□□□□□ -0.19
TPM1-215ENST00000558868 RPP40O75818 363 aaKnown RBP13.86□□□□□ -0.19
TPM1-215ENST00000558868 NFATC1O95644 943 aa13.86□□□□□ -0.19
TPM1-215ENST00000558868 GSRP00390 522 aa13.86□□□□□ -0.19
TPM1-215ENST00000558868 GSTA1P08263 222 aa13.86□□□□□ -0.19
TPM1-215ENST00000558868 HOXB8P17481 243 aaPredicted RBP13.86□□□□□ -0.19
TPM1-215ENST00000558868 POLR2EP19388 210 aaKnown RBP13.86□□□□□ -0.19
TPM1-215ENST00000558868 HLA-FP30511 346 aa13.86□□□□□ -0.19
TPM1-215ENST00000558868 GRIA4P48058 902 aa13.86□□□□□ -0.19
TPM1-215ENST00000558868 CD151P48509 253 aa13.86□□□□□ -0.19
TPM1-215ENST00000558868 EPHB1P54762 984 aa13.86□□□□□ -0.19
TPM1-215ENST00000558868 RAD51Q06609 339 aa13.86□□□□□ -0.19
TPM1-215ENST00000558868 CBX2Q14781 532 aaPredicted RBP13.86□□□□□ -0.19
TPM1-215ENST00000558868 GRM3Q14832 879 aa13.86□□□□□ -0.19
TPM1-215ENST00000558868 DBN1Q16643 649 aa13.86□□□□□ -0.19
TPM1-215ENST00000558868 PDK4Q16654 411 aa13.86□□□□□ -0.19
TPM1-215ENST00000558868 FSTL4Q6MZW2 842 aa13.86□□□□□ -0.19
TPM1-215ENST00000558868 KYAT3Q6YP21 454 aaKnown RBP13.86□□□□□ -0.19
TPM1-215ENST00000558868 LCA5Q86VQ0 697 aa13.86□□□□□ -0.19
TPM1-215ENST00000558868 RNF135Q8IUD6 432 aa13.86□□□□□ -0.19
TPM1-215ENST00000558868 NPAS3Q8IXF0 933 aa13.86□□□□□ -0.19
TPM1-215ENST00000558868 DCLK2Q8N568 766 aa13.86□□□□□ -0.19
TPM1-215ENST00000558868 PCDH20Q8N6Y1 951 aaKnown RBP13.86□□□□□ -0.19
TPM1-215ENST00000558868 EFHBQ8N7U6 833 aa13.86□□□□□ -0.19
TPM1-215ENST00000558868 C2CD4AQ8NCU7 369 aaPredicted RBP13.86□□□□□ -0.19
TPM1-215ENST00000558868 LPCAT1Q8NF37 534 aa13.86□□□□□ -0.19
TPM1-215ENST00000558868 BPIFB1Q8TDL5 484 aa13.86□□□□□ -0.19
TPM1-215ENST00000558868 LRRC8CQ8TDW0 803 aa13.86□□□□□ -0.19
TPM1-215ENST00000558868 WFIKKN2Q8TEU8 576 aa13.86□□□□□ -0.19
TPM1-215ENST00000558868 ZNF473Q8WTR7 871 aaKnown RBP13.86□□□□□ -0.19
TPM1-215ENST00000558868 TIFAQ96CG3 184 aa13.86□□□□□ -0.19
TPM1-215ENST00000558868 ZNF317Q96PQ6 595 aaPredicted RBP13.86□□□□□ -0.19
TPM1-215ENST00000558868 TUBGCP5Q96RT8 1024 aa13.86□□□□□ -0.19
TPM1-215ENST00000558868 LINC00597Q9H2U6 94 aa13.86□□□□□ -0.19
TPM1-215ENST00000558868 ATP13A3Q9H7F0 1226 aa13.86□□□□□ -0.19
TPM1-215ENST00000558868 TRPV4Q9HBA0 871 aa13.86□□□□□ -0.19
TPM1-215ENST00000558868 MLXIPLQ9NP71 852 aa13.86□□□□□ -0.19
TPM1-215ENST00000558868 PCMTD2Q9NV79 361 aa13.86□□□□□ -0.19
TPM1-215ENST00000558868 IL1RAPL1Q9NZN1 696 aa13.86□□□□□ -0.19
TPM1-215ENST00000558868 SLC17A6Q9P2U8 582 aa13.86□□□□□ -0.19
TPM1-215ENST00000558868 FBXO5Q9UKT4 447 aa13.86□□□□□ -0.19
TPM1-215ENST00000558868 INTS6Q9UL03 887 aaKnown RBP13.86□□□□□ -0.19
TPM1-215ENST00000558868 CLEC4EQ9ULY5 219 aa13.86□□□□□ -0.19
TPM1-215ENST00000558868 ANKRD6Q9Y2G4 727 aa13.86□□□□□ -0.19
TPM1-215ENST00000558868 PLLPQ9Y342 182 aa13.86□□□□□ -0.19
TPM1-215ENST00000558868 PCDHGC4Q9Y5F7 938 aa13.86□□□□□ -0.19
TPM1-215ENST00000558868 TTC28Q96AY4 2481 aa13.85□□□□□ -0.19
TPM1-215ENST00000558868 A0A1W2PQ67 120 aa13.85□□□□□ -0.19
TPM1-215ENST00000558868 EPOPA6NHQ4 379 aa13.85□□□□□ -0.19
TPM1-215ENST00000558868 TCP11X1B4DZS4 312 aa13.85□□□□□ -0.19
TPM1-215ENST00000558868 ANKRD66B4E2M5 251 aa13.85□□□□□ -0.19
TPM1-215ENST00000558868 TPP1O14773 563 aa13.85□□□□□ -0.19
TPM1-215ENST00000558868 HOXC11O43248 304 aaPredicted RBP13.85□□□□□ -0.19
TPM1-215ENST00000558868 MT-CO1P00395 513 aa13.85□□□□□ -0.19
TPM1-215ENST00000558868 PRLP01236 227 aa13.85□□□□□ -0.19
TPM1-215ENST00000558868 ASLP04424 464 aa13.85□□□□□ -0.19
TPM1-215ENST00000558868 ADH5P11766 374 aa13.85□□□□□ -0.19
TPM1-215ENST00000558868 SRCP12931 536 aa13.85□□□□□ -0.19
TPM1-215ENST00000558868 DRD4P21917 467 aa13.85□□□□□ -0.19
TPM1-215ENST00000558868 LPOP22079 712 aaPredicted RBP13.85□□□□□ -0.19
TPM1-215ENST00000558868 PSMA3P25788 255 aa13.85□□□□□ -0.19
TPM1-215ENST00000558868 ARNTP27540 789 aa13.85□□□□□ -0.19
TPM1-215ENST00000558868 SERPINA4P29622 427 aa13.85□□□□□ -0.19
TPM1-215ENST00000558868 NNMTP40261 264 aa13.85□□□□□ -0.19
TPM1-215ENST00000558868 MAGEA12P43365 314 aa13.85□□□□□ -0.19
TPM1-215ENST00000558868 ECT2LQ008S8 904 aa13.85□□□□□ -0.19
TPM1-215ENST00000558868 TRAF2Q12933 501 aa13.85□□□□□ -0.19
TPM1-215ENST00000558868 PDGFRLQ15198 375 aa13.85□□□□□ -0.19
TPM1-215ENST00000558868 DHCR24Q15392 516 aa13.85□□□□□ -0.19
TPM1-215ENST00000558868 ZSCAN26Q16670 478 aa13.85□□□□□ -0.19
TPM1-215ENST00000558868 QPCTQ16769 361 aa13.85□□□□□ -0.19
TPM1-215ENST00000558868 FUT11Q495W5 492 aa13.85□□□□□ -0.19
TPM1-215ENST00000558868 ATXN7L2Q5T6C5 722 aaPredicted RBP13.85□□□□□ -0.19
TPM1-215ENST00000558868 ZNF470Q6ECI4 717 aa13.85□□□□□ -0.19
TPM1-215ENST00000558868 MRNIPQ6NTE8 343 aa13.85□□□□□ -0.19
TPM1-215ENST00000558868 ANKRD54Q6NXT1 300 aa13.85□□□□□ -0.19
TPM1-215ENST00000558868 GLT6D1Q7Z4J2 308 aa13.85□□□□□ -0.19
TPM1-215ENST00000558868 KIAA0907Q7Z7F0 614 aaPredicted RBP13.85□□□□□ -0.19
TPM1-215ENST00000558868 SDCCAG8Q86SQ7 713 aaPredicted RBP13.85□□□□□ -0.19
TPM1-215ENST00000558868 ZC3HC1Q86WB0 502 aaKnown RBP13.85□□□□□ -0.19
TPM1-215ENST00000558868 SPATS2Q86XZ4 545 aaKnown RBP13.85□□□□□ -0.19
TPM1-215ENST00000558868 PLPP6Q8IY26 295 aa13.85□□□□□ -0.19
TPM1-215ENST00000558868 TDHQ8IZJ6 230 aa13.85□□□□□ -0.19
TPM1-215ENST00000558868 OTUD6BQ8N6M0 293 aa13.85□□□□□ -0.19
TPM1-215ENST00000558868 PAF1Q8N7H5 531 aa13.85□□□□□ -0.19
TPM1-215ENST00000558868 OR2AP1Q8NGE2 309 aa13.85□□□□□ -0.19
TPM1-215ENST00000558868 OR13J1Q8NGT2 312 aa13.85□□□□□ -0.19
TPM1-215ENST00000558868 GPR150Q8NGU9 434 aa13.85□□□□□ -0.19
TPM1-215ENST00000558868 OR6P1Q8NGX9 317 aa13.85□□□□□ -0.19
TPM1-215ENST00000558868 HDAC10Q969S8 669 aa13.85□□□□□ -0.19
TPM1-215ENST00000558868 GRAMD1AQ96CP6 724 aa13.85□□□□□ -0.19
TPM1-215ENST00000558868 MYO19Q96H55 970 aa13.85□□□□□ -0.19
TPM1-215ENST00000558868 VPS39Q96JC1 886 aa13.85□□□□□ -0.19
TPM1-215ENST00000558868 TSNARE1Q96NA8 513 aa13.85□□□□□ -0.19
TPM1-215ENST00000558868 ASB16Q96NS5 453 aa13.85□□□□□ -0.19
TPM1-215ENST00000558868 GPR22Q99680 433 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms