RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 CIDEBQ9UHD4 219 aa17.42■□□□□ 0.38
PTPN21-208ENST00000556564 SNX6Q9UNH7 406 aa17.42■□□□□ 0.38
PTPN21-208ENST00000556564 ATG7O95352 703 aa17.42■□□□□ 0.38
PTPN21-208ENST00000556564 MAPKAPK2P49137 400 aa17.42■□□□□ 0.38
PTPN21-208ENST00000556564 GPR156Q8NFN8 814 aa17.42■□□□□ 0.38
PTPN21-208ENST00000556564 SMAD5Q99717 465 aaKnown RBP17.42■□□□□ 0.38
PTPN21-208ENST00000556564 RCOR3Q9P2K3 495 aaPredicted RBP17.42■□□□□ 0.38
PTPN21-208ENST00000556564 SLC12A4Q9UP95 1085 aa17.42■□□□□ 0.38
PTPN21-208ENST00000556564 PIGNO95427 931 aa17.42■□□□□ 0.38
PTPN21-208ENST00000556564 SEMG2Q02383 582 aa17.42■□□□□ 0.38
PTPN21-208ENST00000556564 SLC39A4Q6P5W5 647 aa17.42■□□□□ 0.38
PTPN21-208ENST00000556564 PARGQ86W56 976 aa17.42■□□□□ 0.38
PTPN21-208ENST00000556564 BBS7Q8IWZ6 715 aa17.42■□□□□ 0.38
PTPN21-208ENST00000556564 RTL3Q8N8U3 475 aaKnown RBP17.42■□□□□ 0.38
PTPN21-208ENST00000556564 CYB5D2Q8WUJ1 264 aa17.42■□□□□ 0.38
PTPN21-208ENST00000556564 HMGB4Q8WW32 186 aa17.42■□□□□ 0.38
PTPN21-208ENST00000556564 MAGEH1Q9H213 219 aa17.42■□□□□ 0.38
PTPN21-208ENST00000556564 FAM124BQ9H5Z6 455 aaPredicted RBP17.42■□□□□ 0.38
PTPN21-208ENST00000556564 CAB39LQ9H9S4 337 aa17.42■□□□□ 0.38
PTPN21-208ENST00000556564 ERVW-1Q9UQF0 538 aa17.42■□□□□ 0.38
PTPN21-208ENST00000556564 LRRC72A6NJI9 287 aa17.42■□□□□ 0.38
PTPN21-208ENST00000556564 C2CD4BA6NLJ0 364 aa17.42■□□□□ 0.38
PTPN21-208ENST00000556564 RPP40O75818 363 aaKnown RBP17.42■□□□□ 0.38
PTPN21-208ENST00000556564 POP4O95707 220 aaKnown RBP17.42■□□□□ 0.38
PTPN21-208ENST00000556564 IQCF3P0C7M6 154 aa17.42■□□□□ 0.38
PTPN21-208ENST00000556564 ADH5P11766 374 aa17.42■□□□□ 0.38
PTPN21-208ENST00000556564 CCNCP24863 283 aa17.42■□□□□ 0.38
PTPN21-208ENST00000556564 CXCR2P25025 360 aa17.42■□□□□ 0.38
PTPN21-208ENST00000556564 HGSNATQ68CP4 663 aa17.42■□□□□ 0.38
PTPN21-208ENST00000556564 PXYLP1Q8TE99 480 aa17.42■□□□□ 0.38
PTPN21-208ENST00000556564 GBA3Q9H227 469 aa17.42■□□□□ 0.38
PTPN21-208ENST00000556564 TMCC3Q9ULS5 477 aa17.42■□□□□ 0.38
PTPN21-208ENST00000556564 NPEPPSL1A6NEC2 478 aa17.42■□□□□ 0.38
PTPN21-208ENST00000556564 GTF2E2P29084 291 aaKnown RBP17.42■□□□□ 0.38
PTPN21-208ENST00000556564 CRYMQ14894 314 aa17.42■□□□□ 0.38
PTPN21-208ENST00000556564 PRR23BQ6ZRT6 265 aa17.42■□□□□ 0.38
PTPN21-208ENST00000556564 ART4Q93070 314 aa17.42■□□□□ 0.38
PTPN21-208ENST00000556564 TPD52L3Q96J77 140 aa17.42■□□□□ 0.38
PTPN21-208ENST00000556564 MARK4Q96L34 752 aa17.42■□□□□ 0.38
PTPN21-208ENST00000556564 REXO2Q9Y3B8 237 aaKnown RBP17.42■□□□□ 0.38
PTPN21-208ENST00000556564 INSIG1O15503 277 aa17.41■□□□□ 0.38
PTPN21-208ENST00000556564 L1CAMP32004 1257 aa17.41■□□□□ 0.38
PTPN21-208ENST00000556564 SPAM1P38567 509 aa17.41■□□□□ 0.38
PTPN21-208ENST00000556564 PRKAG1P54619 331 aa17.41■□□□□ 0.38
PTPN21-208ENST00000556564 TAF8Q7Z7C8 310 aa17.41■□□□□ 0.38
PTPN21-208ENST00000556564 EMID1Q96A84 441 aaPredicted RBP17.41■□□□□ 0.38
PTPN21-208ENST00000556564 KLC4Q9NSK0 619 aa17.41■□□□□ 0.38
PTPN21-208ENST00000556564 GPN3Q9UHW5 284 aaPredicted RBP17.41■□□□□ 0.38
PTPN21-208ENST00000556564 TAGLN3Q9UI15 199 aa17.41■□□□□ 0.38
PTPN21-208ENST00000556564 TLR6Q9Y2C9 796 aa17.41■□□□□ 0.38
PTPN21-208ENST00000556564 PEX6Q13608 980 aa17.41■□□□□ 0.38
PTPN21-208ENST00000556564 UBE2R2Q712K3 238 aaPredicted RBP17.41■□□□□ 0.38
PTPN21-208ENST00000556564 SRLQ86TD4 932 aa17.41■□□□□ 0.38
PTPN21-208ENST00000556564 RAD9AQ99638 391 aa17.41■□□□□ 0.38
PTPN21-208ENST00000556564 IL23AQ9NPF7 189 aa17.41■□□□□ 0.38
PTPN21-208ENST00000556564 RPS7P62081 194 aaKnown RBP17.41■□□□□ 0.38
PTPN21-208ENST00000556564 SYPL2Q5VXT5 272 aa17.41■□□□□ 0.38
PTPN21-208ENST00000556564 MAMDC4Q6UXC1 1216 aa17.41■□□□□ 0.38
PTPN21-208ENST00000556564 ZNF621Q6ZSS3 439 aa17.41■□□□□ 0.38
PTPN21-208ENST00000556564 TMCO2Q7Z6W1 182 aaPredicted RBP17.41■□□□□ 0.38
PTPN21-208ENST00000556564 QKIQ96PU8 341 aaKnown RBP eCLIP17.41■□□□□ 0.38
PTPN21-208ENST00000556564 SH3GL1Q99961 368 aa17.41■□□□□ 0.38
PTPN21-208ENST00000556564 GPR88Q9GZN0 384 aa17.41■□□□□ 0.38
PTPN21-208ENST00000556564 AJAP1Q9UKB5 411 aaPredicted RBP17.41■□□□□ 0.38
PTPN21-208ENST00000556564 TELO2Q9Y4R8 837 aa17.41■□□□□ 0.38
PTPN21-208ENST00000556564 KRT87PA6NCN2 255 aa17.41■□□□□ 0.38
PTPN21-208ENST00000556564 IFNA14P01570 189 aa17.41■□□□□ 0.38
PTPN21-208ENST00000556564 NTSP30990 170 aa17.41■□□□□ 0.38
PTPN21-208ENST00000556564 TLX1P31314 330 aaPredicted RBP17.41■□□□□ 0.38
PTPN21-208ENST00000556564 CDK7P50613 346 aa17.41■□□□□ 0.38
PTPN21-208ENST00000556564 NDST2P52849 883 aa17.41■□□□□ 0.38
PTPN21-208ENST00000556564 YBEYP58557 167 aaPredicted RBP17.41■□□□□ 0.38
PTPN21-208ENST00000556564 RGS1Q08116 209 aa17.41■□□□□ 0.38
PTPN21-208ENST00000556564 KYAT3Q6YP21 454 aaKnown RBP17.41■□□□□ 0.38
PTPN21-208ENST00000556564 OSTM1Q86WC4 334 aa17.41■□□□□ 0.38
PTPN21-208ENST00000556564 AP2M1Q96CW1 435 aa17.41■□□□□ 0.38
PTPN21-208ENST00000556564 SLC4A5Q9BY07 1137 aa17.41■□□□□ 0.38
PTPN21-208ENST00000556564 ERVK-5Q9HDB9 667 aa17.41■□□□□ 0.38
PTPN21-208ENST00000556564 NOCTQ9UK39 431 aaKnown RBP17.41■□□□□ 0.38
PTPN21-208ENST00000556564 R3HDM2Q9Y2K5 976 aaKnown RBP17.41■□□□□ 0.38
PTPN21-208ENST00000556564 DGKEP52429 567 aa17.41■□□□□ 0.38
PTPN21-208ENST00000556564 ZDHHC20Q5W0Z9 365 aa17.41■□□□□ 0.38
PTPN21-208ENST00000556564 ZNF280BQ86YH2 543 aa17.41■□□□□ 0.38
PTPN21-208ENST00000556564 STX19Q8N4C7 294 aa17.41■□□□□ 0.38
PTPN21-208ENST00000556564 AENQ8WTP8 325 aaKnown RBP17.41■□□□□ 0.38
PTPN21-208ENST00000556564 NMUR1Q9HB89 426 aa17.41■□□□□ 0.38
PTPN21-208ENST00000556564 MAP3K10Q02779 954 aa17.4■□□□□ 0.38
PTPN21-208ENST00000556564 GALNT13Q8IUC8 556 aa17.4■□□□□ 0.38
PTPN21-208ENST00000556564 SLC39A8Q9C0K1 460 aa17.4■□□□□ 0.38
PTPN21-208ENST00000556564 ATP6V1B2P21281 511 aa17.4■□□□□ 0.38
PTPN21-208ENST00000556564 CDKN2BP42772 138 aa17.4■□□□□ 0.38
PTPN21-208ENST00000556564 CCR4P51679 360 aa17.4■□□□□ 0.38
PTPN21-208ENST00000556564 CHRNB3Q05901 458 aa17.4■□□□□ 0.38
PTPN21-208ENST00000556564 SCIMPQ6UWF3 145 aa17.4■□□□□ 0.38
PTPN21-208ENST00000556564 FANCEQ9HB96 536 aa17.4■□□□□ 0.38
PTPN21-208ENST00000556564 BTRCQ9Y297 605 aa17.4■□□□□ 0.38
PTPN21-208ENST00000556564 MYH1P12882 1939 aa17.4■□□□□ 0.38
PTPN21-208ENST00000556564 OR2AG2A6NM03 316 aa17.4■□□□□ 0.38
PTPN21-208ENST00000556564 POU1F1P28069 291 aa17.4■□□□□ 0.38
PTPN21-208ENST00000556564 POTEHQ6S545 545 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms