RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 OPHN1O60890 802 aa19.56■□□□□ 0.72
DDX55-207ENST00000540763 RNGTTO60942 597 aaKnown RBP19.56■□□□□ 0.72
DDX55-207ENST00000540763 FSBPO95073 299 aa19.56■□□□□ 0.72
DDX55-207ENST00000540763 ITPKAP23677 461 aa19.56■□□□□ 0.72
DDX55-207ENST00000540763 CD27P26842 260 aa19.56■□□□□ 0.72
DDX55-207ENST00000540763 STIP1P31948 543 aaKnown RBP19.56■□□□□ 0.72
DDX55-207ENST00000540763 CD68P34810 354 aaPredicted RBP19.56■□□□□ 0.72
DDX55-207ENST00000540763 CD86P42081 329 aa19.56■□□□□ 0.72
DDX55-207ENST00000540763 PPP2CBP62714 309 aa19.56■□□□□ 0.72
DDX55-207ENST00000540763 PPP2CAP67775 309 aa19.56■□□□□ 0.72
DDX55-207ENST00000540763 CREB5Q02930 508 aa19.56■□□□□ 0.72
DDX55-207ENST00000540763 LONRF2Q1L5Z9 754 aa19.56■□□□□ 0.72
DDX55-207ENST00000540763 TMEM52BQ4KMG9 183 aa19.56■□□□□ 0.72
DDX55-207ENST00000540763 PLA2G2CQ5R387 149 aa19.56■□□□□ 0.72
DDX55-207ENST00000540763 PAPD7Q5XG87 772 aaKnown RBP19.56■□□□□ 0.72
DDX55-207ENST00000540763 ARMCX6Q7L4S7 300 aa19.56■□□□□ 0.72
DDX55-207ENST00000540763 PRPF39Q86UA1 669 aaKnown RBP19.56■□□□□ 0.72
DDX55-207ENST00000540763 NDUFAF2Q8N183 169 aa19.56■□□□□ 0.72
DDX55-207ENST00000540763 PAF1Q8N7H5 531 aa19.56■□□□□ 0.72
DDX55-207ENST00000540763 CEP76Q8TAP6 659 aa19.56■□□□□ 0.72
DDX55-207ENST00000540763 ACTRT1Q8TDG2 376 aa19.56■□□□□ 0.72
DDX55-207ENST00000540763 ASB12Q8WXK4 309 aa19.56■□□□□ 0.72
DDX55-207ENST00000540763 RMDN1Q96DB5 314 aa19.56■□□□□ 0.72
DDX55-207ENST00000540763 WDR24Q96S15 920 aa19.56■□□□□ 0.72
DDX55-207ENST00000540763 NAPGQ99747 312 aaPredicted RBP19.56■□□□□ 0.72
DDX55-207ENST00000540763 GBA3Q9H227 469 aa19.56■□□□□ 0.72
DDX55-207ENST00000540763 PCDH12Q9NPG4 1184 aa19.56■□□□□ 0.72
DDX55-207ENST00000540763 PCDHB9Q9Y5E1 797 aa19.56■□□□□ 0.72
DDX55-207ENST00000540763 PRR5-ARHGAP8B1AHC4 643 aa19.55■□□□□ 0.72
DDX55-207ENST00000540763 PGRMC1O00264 195 aaKnown RBP19.55■□□□□ 0.72
DDX55-207ENST00000540763 NEMP1O14524 444 aa19.55■□□□□ 0.72
DDX55-207ENST00000540763 FOXD2O60548 495 aaPredicted RBP19.55■□□□□ 0.72
DDX55-207ENST00000540763 PCDH8O95206 1070 aa19.55■□□□□ 0.72
DDX55-207ENST00000540763 GNSP15586 552 aa19.55■□□□□ 0.72
DDX55-207ENST00000540763 NFKB1P19838 968 aa19.55■□□□□ 0.72
DDX55-207ENST00000540763 IHHQ14623 411 aa19.55■□□□□ 0.72
DDX55-207ENST00000540763 SETMARQ53H47 684 aaPredicted RBP19.55■□□□□ 0.72
DDX55-207ENST00000540763 ANKRD20A2Q5SQ80 823 aa19.55■□□□□ 0.72
DDX55-207ENST00000540763 ANKRD20A1Q5TYW2 823 aa19.55■□□□□ 0.72
DDX55-207ENST00000540763 ANKRD20A3Q5VUR7 823 aa19.55■□□□□ 0.72
DDX55-207ENST00000540763 DPPA4Q7L190 304 aa19.55■□□□□ 0.72
DDX55-207ENST00000540763 RGL4Q8IZJ4 473 aa19.55■□□□□ 0.72
DDX55-207ENST00000540763 DEFB119Q8N690 84 aa19.55■□□□□ 0.72
DDX55-207ENST00000540763 GPR161Q8N6U8 529 aaKnown RBP19.55■□□□□ 0.72
DDX55-207ENST00000540763 PDCD6IPQ8WUM4 868 aaKnown RBP19.55■□□□□ 0.72
DDX55-207ENST00000540763 PIH1D2Q8WWB5 315 aa19.55■□□□□ 0.72
DDX55-207ENST00000540763 ATG4AQ8WYN0 398 aa19.55■□□□□ 0.72
DDX55-207ENST00000540763 TRIM44Q96DX7 344 aaPredicted RBP19.55■□□□□ 0.72
DDX55-207ENST00000540763 MCCC1Q96RQ3 725 aaPredicted RBP19.55■□□□□ 0.72
DDX55-207ENST00000540763 RBM15Q96T37 977 aaKnown RBP eCLIP19.55■□□□□ 0.72
DDX55-207ENST00000540763 ORAI3Q9BRQ5 295 aa19.55■□□□□ 0.72
DDX55-207ENST00000540763 ZFR2Q9UPR6 939 aaKnown RBP19.55■□□□□ 0.72
DDX55-207ENST00000540763 PCDH15Q96QU1 1955 aa19.54■□□□□ 0.72
DDX55-207ENST00000540763 SDK1Q7Z5N4 2213 aa19.54■□□□□ 0.72
DDX55-207ENST00000540763 DMXL1Q9Y485 3027 aa19.54■□□□□ 0.72
DDX55-207ENST00000540763 A0A1W2PQU0 124 aa19.54■□□□□ 0.72
DDX55-207ENST00000540763 CTAGE9A4FU28 777 aa19.54■□□□□ 0.72
DDX55-207ENST00000540763 ANXA9O76027 345 aa19.54■□□□□ 0.72
DDX55-207ENST00000540763 ITGAVP06756 1048 aa19.54■□□□□ 0.72
DDX55-207ENST00000540763 GRIA4P48058 902 aa19.54■□□□□ 0.72
DDX55-207ENST00000540763 ZNF284Q2VY69 593 aa19.54■□□□□ 0.72
DDX55-207ENST00000540763 P3H1Q32P28 736 aa19.54■□□□□ 0.72
DDX55-207ENST00000540763 USP45Q70EL2 814 aa19.54■□□□□ 0.72
DDX55-207ENST00000540763 ADAT2Q7Z6V5 191 aaKnown RBP19.54■□□□□ 0.72
DDX55-207ENST00000540763 C1orf216Q8TAB5 229 aa19.54■□□□□ 0.72
DDX55-207ENST00000540763 SNX19Q92543 992 aa19.54■□□□□ 0.72
DDX55-207ENST00000540763 PIGKQ92643 395 aa19.54■□□□□ 0.72
DDX55-207ENST00000540763 SCRN2Q96FV2 425 aa19.54■□□□□ 0.72
DDX55-207ENST00000540763 TMEM121Q9BTD3 319 aa19.54■□□□□ 0.72
DDX55-207ENST00000540763 ADGRE3Q9BY15 652 aa19.54■□□□□ 0.72
DDX55-207ENST00000540763 ARRDC1-AS1Q9H2J1 176 aa19.54■□□□□ 0.72
DDX55-207ENST00000540763 C10orf88Q9H8K7 445 aa19.54■□□□□ 0.72
DDX55-207ENST00000540763 PCDH9Q9HC56 1237 aa19.54■□□□□ 0.72
DDX55-207ENST00000540763 FAM153AQ9UHL3 310 aa19.54■□□□□ 0.72
DDX55-207ENST00000540763 RSPH14Q9UHP6 348 aa19.54■□□□□ 0.72
DDX55-207ENST00000540763 EIF2B4Q9UI10 523 aaKnown RBP19.54■□□□□ 0.72
DDX55-207ENST00000540763 ITM2BQ9Y287 266 aa19.54■□□□□ 0.72
DDX55-207ENST00000540763 DRG1Q9Y295 367 aaKnown RBP19.54■□□□□ 0.72
DDX55-207ENST00000540763 A0A1B0GTW7 788 aa19.53■□□□□ 0.72
DDX55-207ENST00000540763 GCATO75600 419 aa19.53■□□□□ 0.72
DDX55-207ENST00000540763 PRLP01236 227 aa19.53■□□□□ 0.72
DDX55-207ENST00000540763 EPOP01588 193 aa19.53■□□□□ 0.72
DDX55-207ENST00000540763 ZNF806P0C7X5 589 aa19.53■□□□□ 0.72
DDX55-207ENST00000540763 CYP2A6P11509 494 aaPredicted RBP19.53■□□□□ 0.72
DDX55-207ENST00000540763 MPP3Q13368 585 aa19.53■□□□□ 0.72
DDX55-207ENST00000540763 AGERQ15109 404 aa19.53■□□□□ 0.72
DDX55-207ENST00000540763 DUOXA1Q1HG43 343 aa19.53■□□□□ 0.72
DDX55-207ENST00000540763 NAPEPLDQ6IQ20 393 aa19.53■□□□□ 0.72
DDX55-207ENST00000540763 SLC23A3Q6PIS1 610 aa19.53■□□□□ 0.72
DDX55-207ENST00000540763 KLHDC8BQ8IXV7 354 aa19.53■□□□□ 0.72
DDX55-207ENST00000540763 DENND6BQ8NEG7 585 aa19.53■□□□□ 0.72
DDX55-207ENST00000540763 CXorf40AQ8TE69 158 aa19.53■□□□□ 0.72
DDX55-207ENST00000540763 COG1Q8WTW3 980 aa19.53■□□□□ 0.72
DDX55-207ENST00000540763 C1orf54Q8WWF1 131 aa19.53■□□□□ 0.72
DDX55-207ENST00000540763 TRIB3Q96RU7 358 aa19.53■□□□□ 0.72
DDX55-207ENST00000540763 LYSMD1Q96S90 227 aa19.53■□□□□ 0.72
DDX55-207ENST00000540763 C1QTNF2Q9BXJ5 285 aa19.53■□□□□ 0.72
DDX55-207ENST00000540763 TMEM74BQ9NUR3 256 aa19.53■□□□□ 0.72
DDX55-207ENST00000540763 GGT7Q9UJ14 662 aa19.53■□□□□ 0.72
DDX55-207ENST00000540763 CHKBQ9Y259 395 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms