RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 FGF22Q9HCT0 170 aa13.99□□□□□ -0.17
NKX3-1-202ENST00000523261 TMEM9Q9P0T7 183 aa13.99□□□□□ -0.17
NKX3-1-202ENST00000523261 SLC5A6Q9Y289 635 aa13.99□□□□□ -0.17
NKX3-1-202ENST00000523261 PCDHB3Q9Y5E6 796 aa13.99□□□□□ -0.17
NKX3-1-202ENST00000523261 ACTL7AQ9Y615 435 aa13.99□□□□□ -0.17
NKX3-1-202ENST00000523261 OAS3Q9Y6K5 1087 aaKnown RBP13.99□□□□□ -0.17
NKX3-1-202ENST00000523261 STK17BO94768 372 aa13.98□□□□□ -0.17
NKX3-1-202ENST00000523261 DLGAP3O95886 979 aa13.98□□□□□ -0.17
NKX3-1-202ENST00000523261 UGT2B4P06133 528 aa13.98□□□□□ -0.17
NKX3-1-202ENST00000523261 ACADSBP45954 432 aa13.98□□□□□ -0.17
NKX3-1-202ENST00000523261 ARF5P84085 180 aa13.98□□□□□ -0.17
NKX3-1-202ENST00000523261 CDK17Q00537 523 aa13.98□□□□□ -0.17
NKX3-1-202ENST00000523261 MTA1Q13330 715 aa13.98□□□□□ -0.17
NKX3-1-202ENST00000523261 RABEP1Q15276 862 aa13.98□□□□□ -0.17
NKX3-1-202ENST00000523261 CBWD6Q4V339 395 aa13.98□□□□□ -0.17
NKX3-1-202ENST00000523261 CBWD3Q5JTY5 395 aa13.98□□□□□ -0.17
NKX3-1-202ENST00000523261 CBWD5Q5RIA9 395 aa13.98□□□□□ -0.17
NKX3-1-202ENST00000523261 NKAIN2Q5VXU1 208 aa13.98□□□□□ -0.17
NKX3-1-202ENST00000523261 TTC7BQ86TV6 843 aa13.98□□□□□ -0.17
NKX3-1-202ENST00000523261 ZNF683Q8IZ20 524 aa13.98□□□□□ -0.17
NKX3-1-202ENST00000523261 KIAA1524Q8TCG1 905 aa13.98□□□□□ -0.17
NKX3-1-202ENST00000523261 C5orf34Q96MH7 638 aa13.98□□□□□ -0.17
NKX3-1-202ENST00000523261 KLHL32Q96NJ5 620 aa13.98□□□□□ -0.17
NKX3-1-202ENST00000523261 SLC4A5Q9BY07 1137 aa13.98□□□□□ -0.17
NKX3-1-202ENST00000523261 SLC29A3Q9BZD2 475 aa13.98□□□□□ -0.17
NKX3-1-202ENST00000523261 THAP9Q9H5L6 903 aa13.98□□□□□ -0.17
NKX3-1-202ENST00000523261 MRPL40Q9NQ50 206 aaKnown RBP13.98□□□□□ -0.17
NKX3-1-202ENST00000523261 SPATS2LQ9NUQ6 558 aaKnown RBP13.98□□□□□ -0.17
NKX3-1-202ENST00000523261 COQ6Q9Y2Z9 468 aa13.98□□□□□ -0.17
NKX3-1-202ENST00000523261 RPS6KL1Q9Y6S9 549 aa13.98□□□□□ -0.17
NKX3-1-202ENST00000523261 ANKRD36A6QL64 1941 aa13.98□□□□□ -0.17
NKX3-1-202ENST00000523261 ARHGAP10A1A4S6 786 aa13.97□□□□□ -0.17
NKX3-1-202ENST00000523261 TMEM202A6NGA9 273 aa13.97□□□□□ -0.17
NKX3-1-202ENST00000523261 ZW10O43264 779 aa13.97□□□□□ -0.17
NKX3-1-202ENST00000523261 STX10O60499 249 aa13.97□□□□□ -0.17
NKX3-1-202ENST00000523261 PPP6R2O75170 966 aa13.97□□□□□ -0.17
NKX3-1-202ENST00000523261 DNAJB5O75953 348 aa13.97□□□□□ -0.17
NKX3-1-202ENST00000523261 CD160O95971 181 aa13.97□□□□□ -0.17
NKX3-1-202ENST00000523261 BMP6P22004 513 aa13.97□□□□□ -0.17
NKX3-1-202ENST00000523261 TBXAS1P24557 533 aaPredicted RBP13.97□□□□□ -0.17
NKX3-1-202ENST00000523261 GPR3P46089 330 aa13.97□□□□□ -0.17
NKX3-1-202ENST00000523261 MC2RQ01718 297 aa13.97□□□□□ -0.17
NKX3-1-202ENST00000523261 ADAM9Q13443 819 aa13.97□□□□□ -0.17
NKX3-1-202ENST00000523261 ERV3-1Q14264 604 aa13.97□□□□□ -0.17
NKX3-1-202ENST00000523261 CEACAM20Q6UY09 585 aa13.97□□□□□ -0.17
NKX3-1-202ENST00000523261 TFAP2DQ7Z6R9 452 aa13.97□□□□□ -0.17
NKX3-1-202ENST00000523261 TMEM135Q86UB9 458 aa13.97□□□□□ -0.17
NKX3-1-202ENST00000523261 APLFQ8IW19 511 aaPredicted RBP13.97□□□□□ -0.17
NKX3-1-202ENST00000523261 DEFB106AQ8N104 65 aa13.97□□□□□ -0.17
NKX3-1-202ENST00000523261 RYBPQ8N488 228 aaPredicted RBP13.97□□□□□ -0.17
NKX3-1-202ENST00000523261 ISG20Q96AZ6 181 aaKnown RBP13.97□□□□□ -0.17
NKX3-1-202ENST00000523261 ZPBPQ9BS86 351 aa13.97□□□□□ -0.17
NKX3-1-202ENST00000523261 SPON2Q9BUD6 331 aa13.97□□□□□ -0.17
NKX3-1-202ENST00000523261 ENTPD4Q9Y227 616 aa13.97□□□□□ -0.17
NKX3-1-202ENST00000523261 PCDHB4Q9Y5E5 795 aa13.97□□□□□ -0.17
NKX3-1-202ENST00000523261 SPG11Q96JI7 2443 aa13.96□□□□□ -0.17
NKX3-1-202ENST00000523261 IGHV1OR21-1A0A087WYE8 117 aa13.96□□□□□ -0.17
NKX3-1-202ENST00000523261 DRGXA6NNA5 263 aa13.96□□□□□ -0.17
NKX3-1-202ENST00000523261 E5RJQ4 531 aa13.96□□□□□ -0.17
NKX3-1-202ENST00000523261 KRIT1O00522 736 aa13.96□□□□□ -0.17
NKX3-1-202ENST00000523261 FGF1P05230 155 aa13.96□□□□□ -0.17
NKX3-1-202ENST00000523261 RPL13P26373 211 aaKnown RBP13.96□□□□□ -0.17
NKX3-1-202ENST00000523261 LRMPQ12912 555 aa13.96□□□□□ -0.17
NKX3-1-202ENST00000523261 TMEM52BQ4KMG9 183 aa13.96□□□□□ -0.17
NKX3-1-202ENST00000523261 TP53INP2Q8IXH6 220 aa13.96□□□□□ -0.17
NKX3-1-202ENST00000523261 OR56A4Q8NGH8 313 aa13.96□□□□□ -0.17
NKX3-1-202ENST00000523261 SLC2A13Q96QE2 648 aa13.96□□□□□ -0.17
NKX3-1-202ENST00000523261 MED15Q96RN5 788 aa13.96□□□□□ -0.17
NKX3-1-202ENST00000523261 DPYSL5Q9BPU6 564 aa13.96□□□□□ -0.17
NKX3-1-202ENST00000523261 OSBPL1AQ9BXW6 950 aa13.96□□□□□ -0.17
NKX3-1-202ENST00000523261 TRIM55Q9BYV6 548 aa13.96□□□□□ -0.17
NKX3-1-202ENST00000523261 ATP13A1Q9HD20 1204 aa13.96□□□□□ -0.17
NKX3-1-202ENST00000523261 APMAPQ9HDC9 416 aa13.96□□□□□ -0.17
NKX3-1-202ENST00000523261 MPP6Q9NZW5 540 aa13.96□□□□□ -0.17
NKX3-1-202ENST00000523261 PDP2Q9P2J9 529 aa13.96□□□□□ -0.17
NKX3-1-202ENST00000523261 ABCA2Q9BZC7 2435 aa13.95□□□□□ -0.18
NKX3-1-202ENST00000523261 CROCCQ5TZA2 2017 aa13.95□□□□□ -0.18
NKX3-1-202ENST00000523261 DOCK4Q8N1I0 1966 aa13.95□□□□□ -0.18
NKX3-1-202ENST00000523261 ILVBLA1L0T0 632 aa13.95□□□□□ -0.18
NKX3-1-202ENST00000523261 I6L893 689 aaPredicted RBP13.95□□□□□ -0.18
NKX3-1-202ENST00000523261 CUTAO60888 179 aa13.95□□□□□ -0.18
NKX3-1-202ENST00000523261 OR1E1P30953 314 aa13.95□□□□□ -0.18
NKX3-1-202ENST00000523261 MAN1A1P33908 653 aa13.95□□□□□ -0.18
NKX3-1-202ENST00000523261 LEPRP48357 1165 aaKnown RBP13.95□□□□□ -0.18
NKX3-1-202ENST00000523261 MTM1Q13496 603 aa13.95□□□□□ -0.18
NKX3-1-202ENST00000523261 MAP7Q14244 749 aa13.95□□□□□ -0.18
NKX3-1-202ENST00000523261 DENND1BQ6P3S1 775 aa13.95□□□□□ -0.18
NKX3-1-202ENST00000523261 TMEM71Q6P5X7 295 aa13.95□□□□□ -0.18
NKX3-1-202ENST00000523261 GDPD4Q6W3E5 623 aa13.95□□□□□ -0.18
NKX3-1-202ENST00000523261 ZNF783Q6ZMS7 281 aa13.95□□□□□ -0.18
NKX3-1-202ENST00000523261 TMEM110Q86TL2 294 aa13.95□□□□□ -0.18
NKX3-1-202ENST00000523261 MCEMP1Q8IX19 187 aa13.95□□□□□ -0.18
NKX3-1-202ENST00000523261 ESX1Q8N693 406 aa13.95□□□□□ -0.18
NKX3-1-202ENST00000523261 Q8NA96 180 aa13.95□□□□□ -0.18
NKX3-1-202ENST00000523261 ZDHHC1Q8WTX9 485 aa13.95□□□□□ -0.18
NKX3-1-202ENST00000523261 STK32AQ8WU08 396 aa13.95□□□□□ -0.18
NKX3-1-202ENST00000523261 ANLNQ9NQW6 1124 aa13.95□□□□□ -0.18
NKX3-1-202ENST00000523261 FBXO8Q9NRD0 319 aa13.95□□□□□ -0.18
NKX3-1-202ENST00000523261 FAM13BQ9NYF5 915 aa13.95□□□□□ -0.18
NKX3-1-202ENST00000523261 RCOR3Q9P2K3 495 aaPredicted RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms