RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 KRT39Q6A163 491 aa11.13□□□□□ -0.63
CTNNA1-234ENST00000522227 JMJD6Q6NYC1 403 aaPredicted RBP11.13□□□□□ -0.63
CTNNA1-234ENST00000522227 ZNF761Q86XN6 746 aaPredicted RBP11.13□□□□□ -0.63
CTNNA1-234ENST00000522227 FAM186BQ8IYM0 893 aa11.13□□□□□ -0.63
CTNNA1-234ENST00000522227 PCDH20Q8N6Y1 951 aaKnown RBP11.13□□□□□ -0.63
CTNNA1-234ENST00000522227 DCAF4L2Q8NA75 395 aa11.13□□□□□ -0.63
CTNNA1-234ENST00000522227 Q8NA96 180 aa11.13□□□□□ -0.63
CTNNA1-234ENST00000522227 ATL2Q8NHH9 583 aa11.13□□□□□ -0.63
CTNNA1-234ENST00000522227 KIAA1524Q8TCG1 905 aa11.13□□□□□ -0.63
CTNNA1-234ENST00000522227 ZSWIM1Q9BR11 485 aa11.13□□□□□ -0.63
CTNNA1-234ENST00000522227 TRIT1Q9H3H1 467 aaKnown RBP11.13□□□□□ -0.63
CTNNA1-234ENST00000522227 FGF22Q9HCT0 170 aa11.13□□□□□ -0.63
CTNNA1-234ENST00000522227 PHTF1Q9UMS5 762 aa11.13□□□□□ -0.63
CTNNA1-234ENST00000522227 HS3ST4Q9Y661 456 aa11.13□□□□□ -0.63
CTNNA1-234ENST00000522227 ANKUB1A6NFN9 424 aa11.12□□□□□ -0.63
CTNNA1-234ENST00000522227 AREL1O15033 823 aa11.12□□□□□ -0.63
CTNNA1-234ENST00000522227 CBX6O95503 412 aa11.12□□□□□ -0.63
CTNNA1-234ENST00000522227 TIMP2P16035 220 aa11.12□□□□□ -0.63
CTNNA1-234ENST00000522227 ZNF28P17035 718 aa11.12□□□□□ -0.63
CTNNA1-234ENST00000522227 CCR1P32246 355 aa11.12□□□□□ -0.63
CTNNA1-234ENST00000522227 SERPINH1P50454 418 aaKnown RBP11.12□□□□□ -0.63
CTNNA1-234ENST00000522227 MXI1P50539 228 aa11.12□□□□□ -0.63
CTNNA1-234ENST00000522227 MC2RQ01718 297 aa11.12□□□□□ -0.63
CTNNA1-234ENST00000522227 PTK2Q05397 1052 aa11.12□□□□□ -0.63
CTNNA1-234ENST00000522227 CDK18Q07002 472 aa11.12□□□□□ -0.63
CTNNA1-234ENST00000522227 CUL2Q13617 745 aa11.12□□□□□ -0.63
CTNNA1-234ENST00000522227 TAF5Q15542 800 aa11.12□□□□□ -0.63
CTNNA1-234ENST00000522227 CRTC2Q53ET0 693 aaPredicted RBP11.12□□□□□ -0.63
CTNNA1-234ENST00000522227 TMEM270Q6UE05 265 aa11.12□□□□□ -0.63
CTNNA1-234ENST00000522227 LEKR1Q6ZMV7 388 aa11.12□□□□□ -0.63
CTNNA1-234ENST00000522227 INTS8Q75QN2 995 aaKnown RBP11.12□□□□□ -0.63
CTNNA1-234ENST00000522227 ESX1Q8N693 406 aa11.12□□□□□ -0.63
CTNNA1-234ENST00000522227 PLA2G15Q8NCC3 412 aa11.12□□□□□ -0.63
CTNNA1-234ENST00000522227 KIAA0895Q8NCT3 520 aa11.12□□□□□ -0.63
CTNNA1-234ENST00000522227 FBXL13Q8NEE6 735 aa11.12□□□□□ -0.63
CTNNA1-234ENST00000522227 OR56A4Q8NGH8 313 aa11.12□□□□□ -0.63
CTNNA1-234ENST00000522227 ARHGEF26Q96DR7 871 aa11.12□□□□□ -0.63
CTNNA1-234ENST00000522227 HSFY1Q96LI6 401 aa11.12□□□□□ -0.63
CTNNA1-234ENST00000522227 RANBP9Q96S59 729 aa11.12□□□□□ -0.63
CTNNA1-234ENST00000522227 RUBCNLQ9H714 662 aa11.12□□□□□ -0.63
CTNNA1-234ENST00000522227 ASF1BQ9NVP2 202 aa11.12□□□□□ -0.63
CTNNA1-234ENST00000522227 MPP6Q9NZW5 540 aa11.12□□□□□ -0.63
CTNNA1-234ENST00000522227 KLHL3Q9UH77 587 aa11.12□□□□□ -0.63
CTNNA1-234ENST00000522227 TMEM184BQ9Y519 407 aaPredicted RBP11.12□□□□□ -0.63
CTNNA1-234ENST00000522227 ARHGEF17Q96PE2 2063 aaPredicted RBP11.12□□□□□ -0.63
CTNNA1-234ENST00000522227 IGHV1OR21-1A0A087WYE8 117 aa11.11□□□□□ -0.63
CTNNA1-234ENST00000522227 PDXKO00764 312 aa11.11□□□□□ -0.63
CTNNA1-234ENST00000522227 PPM1DO15297 605 aa11.11□□□□□ -0.63
CTNNA1-234ENST00000522227 ZW10O43264 779 aa11.11□□□□□ -0.63
CTNNA1-234ENST00000522227 CALUO43852 315 aaPredicted RBP11.11□□□□□ -0.63
CTNNA1-234ENST00000522227 PAGE1O75459 146 aa11.11□□□□□ -0.63
CTNNA1-234ENST00000522227 DLGAP3O95886 979 aa11.11□□□□□ -0.63
CTNNA1-234ENST00000522227 IGLV3-25P01717 112 aa11.11□□□□□ -0.63
CTNNA1-234ENST00000522227 FGF1P05230 155 aa11.11□□□□□ -0.63
CTNNA1-234ENST00000522227 NR2F2P24468 414 aa11.11□□□□□ -0.63
CTNNA1-234ENST00000522227 MAN1A1P33908 653 aa11.11□□□□□ -0.63
CTNNA1-234ENST00000522227 SEMA5AQ13591 1074 aa11.11□□□□□ -0.63
CTNNA1-234ENST00000522227 ATXN7L2Q5T6C5 722 aaPredicted RBP11.11□□□□□ -0.63
CTNNA1-234ENST00000522227 CNNM4Q6P4Q7 775 aa11.11□□□□□ -0.63
CTNNA1-234ENST00000522227 CISD2Q8N5K1 135 aaKnown RBP11.11□□□□□ -0.63
CTNNA1-234ENST00000522227 IQUBQ8NA54 791 aa11.11□□□□□ -0.63
CTNNA1-234ENST00000522227 GALNT6Q8NCL4 622 aa11.11□□□□□ -0.63
CTNNA1-234ENST00000522227 SNRNP40Q96DI7 357 aaKnown RBP11.11□□□□□ -0.63
CTNNA1-234ENST00000522227 AHCYL2Q96HN2 611 aaKnown RBP11.11□□□□□ -0.63
CTNNA1-234ENST00000522227 TMX3Q96JJ7 454 aa11.11□□□□□ -0.63
CTNNA1-234ENST00000522227 ULBP3Q9BZM4 244 aa11.11□□□□□ -0.63
CTNNA1-234ENST00000522227 CUEDC2Q9H467 287 aa11.11□□□□□ -0.63
CTNNA1-234ENST00000522227 POPDC2Q9HBU9 364 aa11.11□□□□□ -0.63
CTNNA1-234ENST00000522227 ATP13A1Q9HD20 1204 aa11.11□□□□□ -0.63
CTNNA1-234ENST00000522227 PCDHB4Q9Y5E5 795 aa11.11□□□□□ -0.63
CTNNA1-234ENST00000522227 DGKBQ9Y6T7 804 aa11.11□□□□□ -0.63
CTNNA1-234ENST00000522227 CCDC168Q8NDH2 2452 aa11.11□□□□□ -0.63
CTNNA1-234ENST00000522227 ANKRD36A6QL64 1941 aa11.1□□□□□ -0.63
CTNNA1-234ENST00000522227 TRBV23OR9-2A0A075B6M9 112 aa11.1□□□□□ -0.63
CTNNA1-234ENST00000522227 PVALEFA0A1B0GWK0 134 aa11.1□□□□□ -0.63
CTNNA1-234ENST00000522227 ARGFXA6NJG6 315 aa11.1□□□□□ -0.63
CTNNA1-234ENST00000522227 POLR1CO15160 346 aaPredicted RBP11.1□□□□□ -0.63
CTNNA1-234ENST00000522227 SART1O43290 800 aaKnown RBP11.1□□□□□ -0.63
CTNNA1-234ENST00000522227 LRCH4O75427 683 aa11.1□□□□□ -0.63
CTNNA1-234ENST00000522227 GRAP2O75791 330 aa11.1□□□□□ -0.63
CTNNA1-234ENST00000522227 NADKO95544 446 aaPredicted RBP11.1□□□□□ -0.63
CTNNA1-234ENST00000522227 SLC2A3P11169 496 aa11.1□□□□□ -0.63
CTNNA1-234ENST00000522227 HOXB4P17483 251 aaPredicted RBP11.1□□□□□ -0.63
CTNNA1-234ENST00000522227 XPAP23025 273 aaPredicted RBP11.1□□□□□ -0.63
CTNNA1-234ENST00000522227 AK4P27144 223 aaPredicted RBP11.1□□□□□ -0.63
CTNNA1-234ENST00000522227 OR1E1P30953 314 aa11.1□□□□□ -0.63
CTNNA1-234ENST00000522227 HNRNPH3P31942 346 aaKnown RBP11.1□□□□□ -0.63
CTNNA1-234ENST00000522227 CASP14P31944 242 aa11.1□□□□□ -0.63
CTNNA1-234ENST00000522227 YWHAEP62258 255 aaKnown RBP11.1□□□□□ -0.63
CTNNA1-234ENST00000522227 CDK17Q00537 523 aa11.1□□□□□ -0.63
CTNNA1-234ENST00000522227 CNGA2Q16280 664 aa11.1□□□□□ -0.63
CTNNA1-234ENST00000522227 SLC6A19Q695T7 634 aa11.1□□□□□ -0.63
CTNNA1-234ENST00000522227 RETSATQ6NUM9 610 aa11.1□□□□□ -0.63
CTNNA1-234ENST00000522227 TMEM71Q6P5X7 295 aa11.1□□□□□ -0.63
CTNNA1-234ENST00000522227 SLC30A9Q6PML9 568 aa11.1□□□□□ -0.63
CTNNA1-234ENST00000522227 C6orf15Q6UXA7 325 aaPredicted RBP11.1□□□□□ -0.63
CTNNA1-234ENST00000522227 SLC47A2Q86VL8 602 aa11.1□□□□□ -0.63
CTNNA1-234ENST00000522227 NETO2Q8NC67 525 aa11.1□□□□□ -0.63
CTNNA1-234ENST00000522227 FUBP1Q96AE4 644 aaKnown RBP11.1□□□□□ -0.63
CTNNA1-234ENST00000522227 ELMO2Q96JJ3 720 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms