RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 C16orf87Q6PH81 154 aa17.86■□□□□ 0.45
NUP54-205ENST00000507257 CUZD1Q86UP6 607 aa17.86■□□□□ 0.45
NUP54-205ENST00000507257 RIOX2Q8IUF8 465 aa17.86■□□□□ 0.45
NUP54-205ENST00000507257 PAPD5Q8NDF8 572 aaKnown RBP17.86■□□□□ 0.45
NUP54-205ENST00000507257 TRPV3Q8NET8 790 aa17.86■□□□□ 0.45
NUP54-205ENST00000507257 TRAPPC12Q8WVT3 735 aa17.86■□□□□ 0.45
NUP54-205ENST00000507257 SLC2A13Q96QE2 648 aa17.86■□□□□ 0.45
NUP54-205ENST00000507257 OLFM1Q99784 485 aa17.86■□□□□ 0.45
NUP54-205ENST00000507257 SEZ6LQ9BYH1 1024 aa17.86■□□□□ 0.45
NUP54-205ENST00000507257 ZNF277Q9NRM2 450 aaPredicted RBP17.86■□□□□ 0.45
NUP54-205ENST00000507257 RIC8BQ9NVN3 520 aa17.86■□□□□ 0.45
NUP54-205ENST00000507257 GID8Q9NWU2 228 aa17.86■□□□□ 0.45
NUP54-205ENST00000507257 GIN1Q9NXP7 522 aa17.86■□□□□ 0.45
NUP54-205ENST00000507257 MAGED2Q9UNF1 606 aaPredicted RBP17.86■□□□□ 0.45
NUP54-205ENST00000507257 TMED5Q9Y3A6 229 aa17.86■□□□□ 0.45
NUP54-205ENST00000507257 H0YAE9 185 aa17.86■□□□□ 0.45
NUP54-205ENST00000507257 IPO13O94829 963 aaKnown RBP17.86■□□□□ 0.45
NUP54-205ENST00000507257 CCNA2P20248 432 aa17.86■□□□□ 0.45
NUP54-205ENST00000507257 SNX17Q15036 470 aa17.86■□□□□ 0.45
NUP54-205ENST00000507257 RGS21Q2M5E4 152 aa17.86■□□□□ 0.45
NUP54-205ENST00000507257 ZNF484Q5JVG2 852 aa17.86■□□□□ 0.45
NUP54-205ENST00000507257 CCNYL2Q5T2Q4 361 aa17.86■□□□□ 0.45
NUP54-205ENST00000507257 TMEM26Q6ZUK4 368 aa17.86■□□□□ 0.45
NUP54-205ENST00000507257 KCTD8Q6ZWB6 473 aa17.86■□□□□ 0.45
NUP54-205ENST00000507257 SLC22A9Q8IVM8 553 aa17.86■□□□□ 0.45
NUP54-205ENST00000507257 FUNDC1Q8IVP5 155 aa17.86■□□□□ 0.45
NUP54-205ENST00000507257 ADGRG5Q8IZF4 528 aa17.86■□□□□ 0.45
NUP54-205ENST00000507257 DHRSXQ8N5I4 330 aa17.86■□□□□ 0.45
NUP54-205ENST00000507257 NETO2Q8NC67 525 aa17.86■□□□□ 0.45
NUP54-205ENST00000507257 OR6B3Q8NGW1 331 aa17.86■□□□□ 0.45
NUP54-205ENST00000507257 HEXDCQ8WVB3 486 aa17.86■□□□□ 0.45
NUP54-205ENST00000507257 WNT8BQ93098 351 aa17.86■□□□□ 0.45
NUP54-205ENST00000507257 CPB2Q96IY4 423 aa17.86■□□□□ 0.45
NUP54-205ENST00000507257 MPHOSPH6Q99547 160 aaKnown RBP17.86■□□□□ 0.45
NUP54-205ENST00000507257 SLX1AQ9BQ83 275 aa17.86■□□□□ 0.45
NUP54-205ENST00000507257 GPN2Q9H9Y4 310 aaPredicted RBP17.86■□□□□ 0.45
NUP54-205ENST00000507257 IGSF5Q9NSI5 407 aa17.86■□□□□ 0.45
NUP54-205ENST00000507257 SMPD3Q9NY59 655 aaPredicted RBP17.86■□□□□ 0.45
NUP54-205ENST00000507257 PKD2L2Q9NZM6 624 aa17.86■□□□□ 0.45
NUP54-205ENST00000507257 ZNF639Q9UID6 485 aa17.86■□□□□ 0.45
NUP54-205ENST00000507257 ZNF232Q9UNY5 417 aa17.86■□□□□ 0.45
NUP54-205ENST00000507257 NME4O00746 187 aa17.85■□□□□ 0.45
NUP54-205ENST00000507257 HDCP19113 662 aa17.85■□□□□ 0.45
NUP54-205ENST00000507257 SAT1P21673 171 aa17.85■□□□□ 0.45
NUP54-205ENST00000507257 GPX3P22352 226 aa17.85■□□□□ 0.45
NUP54-205ENST00000507257 RPL10P27635 214 aaKnown RBP17.85■□□□□ 0.45
NUP54-205ENST00000507257 ARCN1P48444 511 aaKnown RBP17.85■□□□□ 0.45
NUP54-205ENST00000507257 STX1BP61266 288 aa17.85■□□□□ 0.45
NUP54-205ENST00000507257 CXCL9Q07325 125 aa17.85■□□□□ 0.45
NUP54-205ENST00000507257 ZBTB6Q15916 424 aa17.85■□□□□ 0.45
NUP54-205ENST00000507257 XKR5Q6UX68 686 aa17.85■□□□□ 0.45
NUP54-205ENST00000507257 KIAA0408Q6ZU52 694 aa17.85■□□□□ 0.45
NUP54-205ENST00000507257 MFSD6LQ8IWD5 586 aa17.85■□□□□ 0.45
NUP54-205ENST00000507257 TP53INP2Q8IXH6 220 aa17.85■□□□□ 0.45
NUP54-205ENST00000507257 TSGA13Q96PP4 275 aa17.85■□□□□ 0.45
NUP54-205ENST00000507257 OMDQ99983 421 aa17.85■□□□□ 0.45
NUP54-205ENST00000507257 MUC3BQ9H195 1237 aa17.85■□□□□ 0.45
NUP54-205ENST00000507257 DPEP3Q9H4B8 488 aa17.85■□□□□ 0.45
NUP54-205ENST00000507257 MAGEE1Q9HCI5 957 aa17.85■□□□□ 0.45
NUP54-205ENST00000507257 SBF1O95248 1867 aa17.85■□□□□ 0.45
NUP54-205ENST00000507257 A0A087WZ62 844 aa17.84■□□□□ 0.45
NUP54-205ENST00000507257 RNF103-CHMP3A0A140T963 221 aa17.84■□□□□ 0.45
NUP54-205ENST00000507257 TRIM43BA6NCK2 446 aa17.84■□□□□ 0.45
NUP54-205ENST00000507257 ADAM23O75077 832 aa17.84■□□□□ 0.45
NUP54-205ENST00000507257 SEC14L2O76054 403 aa17.84■□□□□ 0.45
NUP54-205ENST00000507257 ARIH2O95376 493 aa17.84■□□□□ 0.45
NUP54-205ENST00000507257 RBP1P09455 135 aa17.84■□□□□ 0.45
NUP54-205ENST00000507257 UMPSP11172 480 aa17.84■□□□□ 0.45
NUP54-205ENST00000507257 HNRNPLP14866 589 aaKnown RBP eCLIP17.84■□□□□ 0.45
NUP54-205ENST00000507257 CD247P20963 164 aa17.84■□□□□ 0.45
NUP54-205ENST00000507257 ADORA2BP29275 332 aa17.84■□□□□ 0.45
NUP54-205ENST00000507257 ADRA1BP35368 520 aa17.84■□□□□ 0.45
NUP54-205ENST00000507257 CD151P48509 253 aa17.84■□□□□ 0.45
NUP54-205ENST00000507257 TAS2R39P59534 338 aa17.84■□□□□ 0.45
NUP54-205ENST00000507257 RPS3AP61247 264 aaKnown RBP17.84■□□□□ 0.45
NUP54-205ENST00000507257 CBX2Q14781 532 aaPredicted RBP17.84■□□□□ 0.45
NUP54-205ENST00000507257 FAM83EQ2M2I3 478 aa17.84■□□□□ 0.45
NUP54-205ENST00000507257 DCAF6Q58WW2 860 aa17.84■□□□□ 0.45
NUP54-205ENST00000507257 ZNF773Q6PK81 442 aa17.84■□□□□ 0.45
NUP54-205ENST00000507257 LINC00299Q6ZSB3 139 aa17.84■□□□□ 0.45
NUP54-205ENST00000507257 CMTR2Q8IYT2 770 aaKnown RBP17.84■□□□□ 0.45
NUP54-205ENST00000507257 C2CD4AQ8NCU7 369 aaPredicted RBP17.84■□□□□ 0.45
NUP54-205ENST00000507257 RAB2BQ8WUD1 216 aa17.84■□□□□ 0.45
NUP54-205ENST00000507257 FDXACB1Q9BRP7 624 aaPredicted RBP17.84■□□□□ 0.45
NUP54-205ENST00000507257 TRAF6Q9Y4K3 522 aa17.84■□□□□ 0.45
NUP54-205ENST00000507257 BRWD3Q6RI45 1802 aa17.84■□□□□ 0.45
NUP54-205ENST00000507257 A8MT66 165 aa17.84■□□□□ 0.45
NUP54-205ENST00000507257 CFAP99D6REC4 459 aa17.84■□□□□ 0.45
NUP54-205ENST00000507257 GOLGA8TH3BQL2 631 aa17.84■□□□□ 0.45
NUP54-205ENST00000507257 TMX2-CTNND1H3BSU7 103 aa17.84■□□□□ 0.45
NUP54-205ENST00000507257 DYNC1LI2O43237 492 aaPredicted RBP17.84■□□□□ 0.45
NUP54-205ENST00000507257 GNL1P36915 607 aaPredicted RBP17.84■□□□□ 0.45
NUP54-205ENST00000507257 ADARB1P78563 741 aaKnown RBP17.84■□□□□ 0.45
NUP54-205ENST00000507257 BNIP3Q12983 259 aa17.84■□□□□ 0.45
NUP54-205ENST00000507257 SLC14A2Q15849 920 aa17.84■□□□□ 0.45
NUP54-205ENST00000507257 PPP1R3AQ16821 1122 aa17.84■□□□□ 0.45
NUP54-205ENST00000507257 DCAF4L1Q3SXM0 396 aa17.84■□□□□ 0.45
NUP54-205ENST00000507257 CYBRD1Q53TN4 286 aa17.84■□□□□ 0.45
NUP54-205ENST00000507257 AGAP9Q5VTM2 703 aa17.84■□□□□ 0.45
NUP54-205ENST00000507257 LBX2Q6XYB7 198 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms