RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 SEMG2Q02383 582 aa19.06■□□□□ 0.64
COL5A1-203ENST00000460264 BCL2L1Q07817 233 aa19.06■□□□□ 0.64
COL5A1-203ENST00000460264 EIF2B5Q13144 721 aaKnown RBP19.06■□□□□ 0.64
COL5A1-203ENST00000460264 MMRN1Q13201 1228 aa19.06■□□□□ 0.64
COL5A1-203ENST00000460264 CAMK2BQ13554 666 aa19.06■□□□□ 0.64
COL5A1-203ENST00000460264 HADHQ16836 314 aaKnown RBP19.06■□□□□ 0.64
COL5A1-203ENST00000460264 HS1BP3Q53T59 392 aa19.06■□□□□ 0.64
COL5A1-203ENST00000460264 PROSER1Q86XN7 944 aa19.06■□□□□ 0.64
COL5A1-203ENST00000460264 CCDC86Q9H6F5 360 aaKnown RBP19.06■□□□□ 0.64
COL5A1-203ENST00000460264 ABHD10Q9NUJ1 306 aa19.06■□□□□ 0.64
COL5A1-203ENST00000460264 ACACAQ13085 2346 aa19.06■□□□□ 0.64
COL5A1-203ENST00000460264 TAF4O00268 1085 aa19.05■□□□□ 0.64
COL5A1-203ENST00000460264 TRAFD1O14545 582 aaPredicted RBP19.05■□□□□ 0.64
COL5A1-203ENST00000460264 TOR1BO14657 336 aa19.05■□□□□ 0.64
COL5A1-203ENST00000460264 MFAP3LO75121 409 aa19.05■□□□□ 0.64
COL5A1-203ENST00000460264 NEBLO76041 1014 aa19.05■□□□□ 0.64
COL5A1-203ENST00000460264 PROSCO94903 275 aa19.05■□□□□ 0.64
COL5A1-203ENST00000460264 H2AFZP0C0S5 128 aa19.05■□□□□ 0.64
COL5A1-203ENST00000460264 ALPPL2P10696 532 aa19.05■□□□□ 0.64
COL5A1-203ENST00000460264 JUNDP17535 347 aa19.05■□□□□ 0.64
COL5A1-203ENST00000460264 HNF1BP35680 557 aa19.05■□□□□ 0.64
COL5A1-203ENST00000460264 GJC1P36383 396 aa19.05■□□□□ 0.64
COL5A1-203ENST00000460264 HSPA9P38646 679 aaKnown RBP19.05■□□□□ 0.64
COL5A1-203ENST00000460264 YPEL5P62699 121 aa19.05■□□□□ 0.64
COL5A1-203ENST00000460264 DAB2P98082 770 aa19.05■□□□□ 0.64
COL5A1-203ENST00000460264 RALGDSQ12967 914 aa19.05■□□□□ 0.64
COL5A1-203ENST00000460264 DPYSL3Q14195 570 aa19.05■□□□□ 0.64
COL5A1-203ENST00000460264 PTK2BQ14289 1009 aa19.05■□□□□ 0.64
COL5A1-203ENST00000460264 LRRC14Q15048 493 aa19.05■□□□□ 0.64
COL5A1-203ENST00000460264 AGERQ15109 404 aa19.05■□□□□ 0.64
COL5A1-203ENST00000460264 WSCD2Q2TBF2 565 aa19.05■□□□□ 0.64
COL5A1-203ENST00000460264 HES3Q5TGS1 186 aa19.05■□□□□ 0.64
COL5A1-203ENST00000460264 MACC1Q6ZN28 852 aa19.05■□□□□ 0.64
COL5A1-203ENST00000460264 H2AFVQ71UI9 128 aa19.05■□□□□ 0.64
COL5A1-203ENST00000460264 PGBD5Q8N414 524 aa19.05■□□□□ 0.64
COL5A1-203ENST00000460264 MGME1Q9BQP7 344 aa19.05■□□□□ 0.64
COL5A1-203ENST00000460264 DEF6Q9H4E7 631 aa19.05■□□□□ 0.64
COL5A1-203ENST00000460264 ZNHIT6Q9NWK9 470 aaKnown RBP19.05■□□□□ 0.64
COL5A1-203ENST00000460264 PNMA8BQ9ULN7 279 aaPredicted RBP19.05■□□□□ 0.64
COL5A1-203ENST00000460264 CSNK1G3Q9Y6M4 447 aa19.05■□□□□ 0.64
COL5A1-203ENST00000460264 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.04■□□□□ 0.64
COL5A1-203ENST00000460264 TTC24A2A3L6 582 aaPredicted RBP19.04■□□□□ 0.64
COL5A1-203ENST00000460264 K7ESM1 405 aa19.04■□□□□ 0.64
COL5A1-203ENST00000460264 MFSD11O43934 449 aa19.04■□□□□ 0.64
COL5A1-203ENST00000460264 TPM1P09493 284 aa19.04■□□□□ 0.64
COL5A1-203ENST00000460264 CKMT1AP12532 417 aa19.04■□□□□ 0.64
COL5A1-203ENST00000460264 CR2P20023 1033 aa19.04■□□□□ 0.64
COL5A1-203ENST00000460264 ATP13A4Q4VNC1 1196 aa19.04■□□□□ 0.64
COL5A1-203ENST00000460264 RBFAQ8N0V3 343 aa19.04■□□□□ 0.64
COL5A1-203ENST00000460264 PAF1Q8N7H5 531 aa19.04■□□□□ 0.64
COL5A1-203ENST00000460264 MDM1Q8TC05 714 aa19.04■□□□□ 0.64
COL5A1-203ENST00000460264 SPOCK2Q92563 424 aa19.04■□□□□ 0.64
COL5A1-203ENST00000460264 APOLD1Q96LR9 279 aa19.04■□□□□ 0.64
COL5A1-203ENST00000460264 DUSP23Q9BVJ7 150 aa19.04■□□□□ 0.64
COL5A1-203ENST00000460264 APOBEC3BQ9UH17 382 aaKnown RBP19.04■□□□□ 0.64
COL5A1-203ENST00000460264 LY6G6EA0A0G2JKS1 128 aa19.03■□□□□ 0.64
COL5A1-203ENST00000460264 TRABD2BA6NFA1 517 aa19.03■□□□□ 0.64
COL5A1-203ENST00000460264 AQP9O43315 295 aa19.03■□□□□ 0.64
COL5A1-203ENST00000460264 AKR1B10O60218 316 aa19.03■□□□□ 0.64
COL5A1-203ENST00000460264 SOCS5O75159 536 aa19.03■□□□□ 0.64
COL5A1-203ENST00000460264 TMEM253P0C7T8 217 aa19.03■□□□□ 0.64
COL5A1-203ENST00000460264 MMP13P45452 471 aa19.03■□□□□ 0.64
COL5A1-203ENST00000460264 TAS2R40P59535 323 aa19.03■□□□□ 0.64
COL5A1-203ENST00000460264 POLR2LP62875 67 aaKnown RBP19.03■□□□□ 0.64
COL5A1-203ENST00000460264 NCBP2-AS2Q69YL0 99 aa19.03■□□□□ 0.64
COL5A1-203ENST00000460264 DPPA4Q7L190 304 aa19.03■□□□□ 0.64
COL5A1-203ENST00000460264 PHACTR4Q8IZ21 702 aa19.03■□□□□ 0.64
COL5A1-203ENST00000460264 BBS5Q8N3I7 341 aa19.03■□□□□ 0.64
COL5A1-203ENST00000460264 PDCD7Q8N8D1 485 aaKnown RBP19.03■□□□□ 0.64
COL5A1-203ENST00000460264 FAM181AQ8N9Y4 354 aa19.03■□□□□ 0.64
COL5A1-203ENST00000460264 PCDH19Q8TAB3 1148 aa19.03■□□□□ 0.64
COL5A1-203ENST00000460264 BTN2A2Q8WVV5 523 aa19.03■□□□□ 0.64
COL5A1-203ENST00000460264 RFFLQ8WZ73 363 aa19.03■□□□□ 0.64
COL5A1-203ENST00000460264 NUDCD1Q96RS6 583 aa19.03■□□□□ 0.64
COL5A1-203ENST00000460264 CHP1Q99653 195 aa19.03■□□□□ 0.64
COL5A1-203ENST00000460264 ZNF670Q9BS34 389 aa19.03■□□□□ 0.64
COL5A1-203ENST00000460264 TCEAL2Q9H3H9 227 aaPredicted RBP19.03■□□□□ 0.64
COL5A1-203ENST00000460264 DKK4Q9UBT3 224 aa19.03■□□□□ 0.64
COL5A1-203ENST00000460264 LCMT1Q9UIC8 334 aa19.03■□□□□ 0.64
COL5A1-203ENST00000460264 U3KQA8 63 aa19.03■□□□□ 0.64
COL5A1-203ENST00000460264 CFAP69A5D8W1 941 aa19.02■□□□□ 0.64
COL5A1-203ENST00000460264 HTRA2O43464 458 aaPredicted RBP19.02■□□□□ 0.64
COL5A1-203ENST00000460264 LZTS3O60299 673 aaPredicted RBP19.02■□□□□ 0.64
COL5A1-203ENST00000460264 ELFN1P0C7U0 828 aa19.02■□□□□ 0.64
COL5A1-203ENST00000460264 MYF5P13349 255 aa19.02■□□□□ 0.64
COL5A1-203ENST00000460264 JUPP14923 745 aa19.02■□□□□ 0.64
COL5A1-203ENST00000460264 MAN1A1P33908 653 aa19.02■□□□□ 0.64
COL5A1-203ENST00000460264 PEX5P50542 639 aa19.02■□□□□ 0.64
COL5A1-203ENST00000460264 ADKP55263 362 aaKnown RBP19.02■□□□□ 0.64
COL5A1-203ENST00000460264 INSM1Q01101 510 aaPredicted RBP19.02■□□□□ 0.64
COL5A1-203ENST00000460264 PAFAH1B3Q15102 231 aaKnown RBP19.02■□□□□ 0.64
COL5A1-203ENST00000460264 TSR1Q2NL82 804 aaKnown RBP19.02■□□□□ 0.64
COL5A1-203ENST00000460264 ANKRD20A8PQ5CZ79 823 aa19.02■□□□□ 0.64
COL5A1-203ENST00000460264 MARC1Q5VT66 337 aa19.02■□□□□ 0.64
COL5A1-203ENST00000460264 ZCCHC8Q6NZY4 707 aaKnown RBP19.02■□□□□ 0.64
COL5A1-203ENST00000460264 LRRC49Q8IUZ0 686 aa19.02■□□□□ 0.64
COL5A1-203ENST00000460264 KCTD6Q8NC69 237 aa19.02■□□□□ 0.64
COL5A1-203ENST00000460264 LMX1AQ8TE12 382 aa19.02■□□□□ 0.64
COL5A1-203ENST00000460264 NSMCE1Q8WV22 266 aa19.02■□□□□ 0.64
COL5A1-203ENST00000460264 FAF2Q96CS3 445 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms