RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 HECTD3Q5T447 861 aa10.49□□□□□ -0.73
CPNE1-218ENST00000439806 NXNQ6DKJ4 435 aa10.49□□□□□ -0.73
CPNE1-218ENST00000439806 KIAA1841Q6NSI8 718 aa10.49□□□□□ -0.73
CPNE1-218ENST00000439806 LRRC74BQ6ZQY2 392 aa10.49□□□□□ -0.73
CPNE1-218ENST00000439806 RIPOR1Q6ZS17 1223 aa10.49□□□□□ -0.73
CPNE1-218ENST00000439806 CILP2Q8IUL8 1156 aa10.49□□□□□ -0.73
CPNE1-218ENST00000439806 SLC22A9Q8IVM8 553 aa10.49□□□□□ -0.73
CPNE1-218ENST00000439806 CFAP52Q8N1V2 620 aa10.49□□□□□ -0.73
CPNE1-218ENST00000439806 SPATA6LQ8N4H0 392 aa10.49□□□□□ -0.73
CPNE1-218ENST00000439806 TMEM151AQ8N4L1 468 aa10.49□□□□□ -0.73
CPNE1-218ENST00000439806 TXNDC5Q8NBS9 432 aaKnown RBP10.49□□□□□ -0.73
CPNE1-218ENST00000439806 OR7D4Q8NG98 312 aa10.49□□□□□ -0.73
CPNE1-218ENST00000439806 OR13J1Q8NGT2 312 aa10.49□□□□□ -0.73
CPNE1-218ENST00000439806 BCL7CQ8WUZ0 217 aaPredicted RBP10.49□□□□□ -0.73
CPNE1-218ENST00000439806 CLPTM1LQ96KA5 538 aa10.49□□□□□ -0.73
CPNE1-218ENST00000439806 CNDP1Q96KN2 507 aa10.49□□□□□ -0.73
CPNE1-218ENST00000439806 PPP1R36Q96LQ0 422 aa10.49□□□□□ -0.73
CPNE1-218ENST00000439806 ZNF570Q96NI8 536 aa10.49□□□□□ -0.73
CPNE1-218ENST00000439806 GPR78Q96P69 363 aa10.49□□□□□ -0.73
CPNE1-218ENST00000439806 OR52B2Q96RD2 323 aa10.49□□□□□ -0.73
CPNE1-218ENST00000439806 OLFM1Q99784 485 aa10.49□□□□□ -0.73
CPNE1-218ENST00000439806 SPON2Q9BUD6 331 aa10.49□□□□□ -0.73
CPNE1-218ENST00000439806 SHCBP1LQ9BZQ2 653 aa10.49□□□□□ -0.73
CPNE1-218ENST00000439806 PDFQ9HBH1 243 aa10.49□□□□□ -0.73
CPNE1-218ENST00000439806 GPAMQ9HCL2 828 aa10.49□□□□□ -0.73
CPNE1-218ENST00000439806 ACSS2Q9NR19 701 aa10.49□□□□□ -0.73
CPNE1-218ENST00000439806 MAN1C1Q9NR34 630 aa10.49□□□□□ -0.73
CPNE1-218ENST00000439806 NCKIPSDQ9NZQ3 722 aa10.49□□□□□ -0.73
CPNE1-218ENST00000439806 STX18Q9P2W9 335 aaKnown RBP10.49□□□□□ -0.73
CPNE1-218ENST00000439806 CORO1CQ9ULV4 474 aaPredicted RBP10.49□□□□□ -0.73
CPNE1-218ENST00000439806 G3BP2Q9UN86 482 aaKnown RBP10.49□□□□□ -0.73
CPNE1-218ENST00000439806 ARHGAP26Q9UNA1 814 aa10.49□□□□□ -0.73
CPNE1-218ENST00000439806 BACE2Q9Y5Z0 518 aa10.49□□□□□ -0.73
CPNE1-218ENST00000439806 ZFP37Q9Y6Q3 630 aaPredicted RBP10.49□□□□□ -0.73
CPNE1-218ENST00000439806 ANAPC1Q9H1A4 1944 aa10.48□□□□□ -0.73
CPNE1-218ENST00000439806 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.48□□□□□ -0.73
CPNE1-218ENST00000439806 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.48□□□□□ -0.73
CPNE1-218ENST00000439806 OR51F1A6NGY5 319 aa10.48□□□□□ -0.73
CPNE1-218ENST00000439806 CCL22O00626 93 aa10.48□□□□□ -0.73
CPNE1-218ENST00000439806 AURKAO14965 403 aa10.48□□□□□ -0.73
CPNE1-218ENST00000439806 SLC22A2O15244 555 aa10.48□□□□□ -0.73
CPNE1-218ENST00000439806 GRID2O43424 1007 aa10.48□□□□□ -0.73
CPNE1-218ENST00000439806 LDB2O43679 373 aa10.48□□□□□ -0.73
CPNE1-218ENST00000439806 ZBTB14O43829 449 aa10.48□□□□□ -0.73
CPNE1-218ENST00000439806 PQBP1O60828 265 aaKnown RBP10.48□□□□□ -0.73
CPNE1-218ENST00000439806 FKBP6O75344 327 aa10.48□□□□□ -0.73
CPNE1-218ENST00000439806 UPP2O95045 317 aa10.48□□□□□ -0.73
CPNE1-218ENST00000439806 GJB5O95377 273 aa10.48□□□□□ -0.73
CPNE1-218ENST00000439806 GOT2P00505 430 aaKnown RBP10.48□□□□□ -0.73
CPNE1-218ENST00000439806 EPOP01588 193 aa10.48□□□□□ -0.73
CPNE1-218ENST00000439806 SLC4A1P02730 911 aa10.48□□□□□ -0.73
CPNE1-218ENST00000439806 CCDC166P0CW27 439 aa10.48□□□□□ -0.73
CPNE1-218ENST00000439806 THRAP10827 490 aa10.48□□□□□ -0.73
CPNE1-218ENST00000439806 RPL17P18621 184 aaKnown RBP10.48□□□□□ -0.73
CPNE1-218ENST00000439806 OGNP20774 298 aaKnown RBP10.48□□□□□ -0.73
CPNE1-218ENST00000439806 PIK3R1P27986 724 aa10.48□□□□□ -0.73
CPNE1-218ENST00000439806 OR1D2P34982 312 aa10.48□□□□□ -0.73
CPNE1-218ENST00000439806 CPOXP36551 454 aa10.48□□□□□ -0.73
CPNE1-218ENST00000439806 ALDH7A1P49419 539 aaKnown RBP10.48□□□□□ -0.73
CPNE1-218ENST00000439806 ARSDP51689 593 aa10.48□□□□□ -0.73
CPNE1-218ENST00000439806 EPHB1P54762 984 aa10.48□□□□□ -0.73
CPNE1-218ENST00000439806 AP2B1P63010 937 aa10.48□□□□□ -0.73
CPNE1-218ENST00000439806 ZNF177Q13360 481 aaPredicted RBP10.48□□□□□ -0.73
CPNE1-218ENST00000439806 MSLNQ13421 630 aaPredicted RBP10.48□□□□□ -0.73
CPNE1-218ENST00000439806 GALNT3Q14435 633 aa10.48□□□□□ -0.73
CPNE1-218ENST00000439806 VEPH1Q14D04 833 aa10.48□□□□□ -0.73
CPNE1-218ENST00000439806 PDCD2Q16342 344 aaPredicted RBP10.48□□□□□ -0.73
CPNE1-218ENST00000439806 LSM12Q3MHD2 195 aaKnown RBP10.48□□□□□ -0.73
CPNE1-218ENST00000439806 ZNF789Q5FWF6 425 aa10.48□□□□□ -0.73
CPNE1-218ENST00000439806 SPOUT1Q5T280 376 aaKnown RBP10.48□□□□□ -0.73
CPNE1-218ENST00000439806 MRNIPQ6NTE8 343 aa10.48□□□□□ -0.73
CPNE1-218ENST00000439806 C16orf89Q6UX73 402 aa10.48□□□□□ -0.73
CPNE1-218ENST00000439806 TRIM67Q6ZTA4 783 aa10.48□□□□□ -0.73
CPNE1-218ENST00000439806 PIWIL4Q7Z3Z4 852 aaKnown RBP10.48□□□□□ -0.73
CPNE1-218ENST00000439806 TMEM173Q86WV6 379 aaPredicted RBP10.48□□□□□ -0.73
CPNE1-218ENST00000439806 DENND1CQ8IV53 801 aa10.48□□□□□ -0.73
CPNE1-218ENST00000439806 KIRREL3Q8IZU9 778 aa10.48□□□□□ -0.73
CPNE1-218ENST00000439806 LSMEM2Q8N112 164 aa10.48□□□□□ -0.73
CPNE1-218ENST00000439806 PHTF2Q8N3S3 785 aa10.48□□□□□ -0.73
CPNE1-218ENST00000439806 DTX3LQ8TDB6 740 aa10.48□□□□□ -0.73
CPNE1-218ENST00000439806 DNAJC9Q8WXX5 260 aa10.48□□□□□ -0.73
CPNE1-218ENST00000439806 PEX13Q92968 403 aa10.48□□□□□ -0.73
CPNE1-218ENST00000439806 MYEOVQ96EZ4 313 aa10.48□□□□□ -0.73
CPNE1-218ENST00000439806 NAF1Q96HR8 494 aaKnown RBP10.48□□□□□ -0.73
CPNE1-218ENST00000439806 SCLYQ96I15 445 aa10.48□□□□□ -0.73
CPNE1-218ENST00000439806 FAR2Q96K12 515 aa10.48□□□□□ -0.73
CPNE1-218ENST00000439806 DNAJC1Q96KC8 554 aaKnown RBP10.48□□□□□ -0.73
CPNE1-218ENST00000439806 TBATAQ96M53 351 aa10.48□□□□□ -0.73
CPNE1-218ENST00000439806 PANX3Q96QZ0 392 aa10.48□□□□□ -0.73
CPNE1-218ENST00000439806 DDX50Q9BQ39 737 aaKnown RBP10.48□□□□□ -0.73
CPNE1-218ENST00000439806 RTKNQ9BST9 563 aa10.48□□□□□ -0.73
CPNE1-218ENST00000439806 NUF2Q9BZD4 464 aa10.48□□□□□ -0.73
CPNE1-218ENST00000439806 WDR55Q9H6Y2 383 aaPredicted RBP10.48□□□□□ -0.73
CPNE1-218ENST00000439806 YY1AP1Q9H869 796 aa10.48□□□□□ -0.73
CPNE1-218ENST00000439806 CYP4F11Q9HBI6 524 aa10.48□□□□□ -0.73
CPNE1-218ENST00000439806 EML4Q9HC35 981 aaKnown RBP10.48□□□□□ -0.73
CPNE1-218ENST00000439806 CYP4F12Q9HCS2 524 aa10.48□□□□□ -0.73
CPNE1-218ENST00000439806 SCUBE2Q9NQ36 999 aa10.48□□□□□ -0.73
CPNE1-218ENST00000439806 CATSPERZQ9NTU4 200 aa10.48□□□□□ -0.73
CPNE1-218ENST00000439806 TRPM5Q9NZQ8 1165 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms