RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 GSCP56915 257 aaPredicted RBP13.91□□□□□ -0.18
CXCL12-202ENST00000374426 YBEYP58557 167 aaPredicted RBP13.91□□□□□ -0.18
CXCL12-202ENST00000374426 SRP54P61011 504 aaKnown RBP13.91□□□□□ -0.18
CXCL12-202ENST00000374426 POLR2FP61218 127 aaKnown RBP13.91□□□□□ -0.18
CXCL12-202ENST00000374426 CCL7P80098 99 aa13.91□□□□□ -0.18
CXCL12-202ENST00000374426 ELP6Q0PNE2 266 aa13.91□□□□□ -0.18
CXCL12-202ENST00000374426 EIF3IQ13347 325 aaKnown RBP13.91□□□□□ -0.18
CXCL12-202ENST00000374426 INPP5AQ14642 412 aa13.91□□□□□ -0.18
CXCL12-202ENST00000374426 NFATC4Q14934 902 aa13.91□□□□□ -0.18
CXCL12-202ENST00000374426 UGP2Q16851 508 aa13.91□□□□□ -0.18
CXCL12-202ENST00000374426 PARP15Q460N3 678 aa13.91□□□□□ -0.18
CXCL12-202ENST00000374426 ENPP7Q6UWV6 458 aa13.91□□□□□ -0.18
CXCL12-202ENST00000374426 TRIM72Q6ZMU5 477 aa13.91□□□□□ -0.18
CXCL12-202ENST00000374426 RAB11FIP2Q7L804 512 aa13.91□□□□□ -0.18
CXCL12-202ENST00000374426 RD3Q7Z3Z2 195 aa13.91□□□□□ -0.18
CXCL12-202ENST00000374426 FBXO39Q8N4B4 442 aa13.91□□□□□ -0.18
CXCL12-202ENST00000374426 APOOQ9BUR5 198 aa13.91□□□□□ -0.18
CXCL12-202ENST00000374426 FAM207AQ9NSI2 230 aaPredicted RBP13.91□□□□□ -0.18
CXCL12-202ENST00000374426 ADAM22Q9P0K1 906 aa13.91□□□□□ -0.18
CXCL12-202ENST00000374426 DACH1Q9UI36 760 aa13.91□□□□□ -0.18
CXCL12-202ENST00000374426 LRRK1Q38SD2 2015 aa13.91□□□□□ -0.18
CXCL12-202ENST00000374426 UBR5O95071 2799 aaPredicted RBP13.91□□□□□ -0.18
CXCL12-202ENST00000374426 LRP4O75096 1905 aa13.9□□□□□ -0.18
CXCL12-202ENST00000374426 WASH4PA8MWX3 477 aa13.9□□□□□ -0.18
CXCL12-202ENST00000374426 CCP110O43303 1012 aa13.9□□□□□ -0.18
CXCL12-202ENST00000374426 CREB3O43889 395 aa13.9□□□□□ -0.18
CXCL12-202ENST00000374426 NOBOXO60393 691 aa13.9□□□□□ -0.18
CXCL12-202ENST00000374426 HGFP14210 728 aa13.9□□□□□ -0.18
CXCL12-202ENST00000374426 GPD1P21695 349 aa13.9□□□□□ -0.18
CXCL12-202ENST00000374426 HTR1BP28222 390 aa13.9□□□□□ -0.18
CXCL12-202ENST00000374426 CCKBRP32239 447 aa13.9□□□□□ -0.18
CXCL12-202ENST00000374426 MMP12P39900 470 aa13.9□□□□□ -0.18
CXCL12-202ENST00000374426 NSFP46459 744 aaKnown RBP13.9□□□□□ -0.18
CXCL12-202ENST00000374426 LIG3P49916 1009 aa13.9□□□□□ -0.18
CXCL12-202ENST00000374426 INHBCP55103 352 aa13.9□□□□□ -0.18
CXCL12-202ENST00000374426 AGERQ15109 404 aa13.9□□□□□ -0.18
CXCL12-202ENST00000374426 TGIF1Q15583 401 aa13.9□□□□□ -0.18
CXCL12-202ENST00000374426 EFHC2Q5JST6 749 aa13.9□□□□□ -0.18
CXCL12-202ENST00000374426 ZSWIM9Q86XI8 627 aa13.9□□□□□ -0.18
CXCL12-202ENST00000374426 GKN2Q86XP6 184 aa13.9□□□□□ -0.18
CXCL12-202ENST00000374426 UMODL1-AS1Q8N2C9 162 aa13.9□□□□□ -0.18
CXCL12-202ENST00000374426 C3orf20Q8ND61 904 aa13.9□□□□□ -0.18
CXCL12-202ENST00000374426 HCAR2Q8TDS4 363 aa13.9□□□□□ -0.18
CXCL12-202ENST00000374426 PDXPQ96GD0 296 aa13.9□□□□□ -0.18
CXCL12-202ENST00000374426 RBM15Q96T37 977 aaKnown RBP eCLIP13.9□□□□□ -0.18
CXCL12-202ENST00000374426 NCAPGQ9BPX3 1015 aa13.9□□□□□ -0.18
CXCL12-202ENST00000374426 SELENOOQ9BVL4 669 aa13.9□□□□□ -0.18
CXCL12-202ENST00000374426 SUV39H2Q9H5I1 410 aa13.9□□□□□ -0.18
CXCL12-202ENST00000374426 PDFQ9HBH1 243 aa13.9□□□□□ -0.18
CXCL12-202ENST00000374426 NLRC4Q9NPP4 1024 aa13.9□□□□□ -0.18
CXCL12-202ENST00000374426 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.9□□□□□ -0.18
CXCL12-202ENST00000374426 KLQ9UEF7 1012 aa13.9□□□□□ -0.18
CXCL12-202ENST00000374426 ACSL6Q9UKU0 697 aa13.9□□□□□ -0.18
CXCL12-202ENST00000374426 DAAM1Q9Y4D1 1078 aa13.9□□□□□ -0.18
CXCL12-202ENST00000374426 TCRBV5S1A1TA0A578 114 aa13.89□□□□□ -0.19
CXCL12-202ENST00000374426 SIGLEC16A6NMB1 481 aa13.89□□□□□ -0.19
CXCL12-202ENST00000374426 TMX2-CTNND1H3BSU7 103 aa13.89□□□□□ -0.19
CXCL12-202ENST00000374426 BUB1BO60566 1050 aaPredicted RBP13.89□□□□□ -0.19
CXCL12-202ENST00000374426 PRKCGP05129 697 aa13.89□□□□□ -0.19
CXCL12-202ENST00000374426 PCCBP05166 539 aa13.89□□□□□ -0.19
CXCL12-202ENST00000374426 ZNF143P52747 638 aaPredicted RBP13.89□□□□□ -0.19
CXCL12-202ENST00000374426 SRSF6Q13247 344 aaKnown RBP13.89□□□□□ -0.19
CXCL12-202ENST00000374426 CLEC16AQ2KHT3 1053 aa13.89□□□□□ -0.19
CXCL12-202ENST00000374426 SCYL2Q6P3W7 929 aa13.89□□□□□ -0.19
CXCL12-202ENST00000374426 BRAT1Q6PJG6 821 aa13.89□□□□□ -0.19
CXCL12-202ENST00000374426 DNAAF5Q86Y56 855 aa13.89□□□□□ -0.19
CXCL12-202ENST00000374426 PHF13Q86YI8 300 aaPredicted RBP13.89□□□□□ -0.19
CXCL12-202ENST00000374426 JAMLQ86YT9 394 aa13.89□□□□□ -0.19
CXCL12-202ENST00000374426 CAMK1DQ8IU85 385 aa13.89□□□□□ -0.19
CXCL12-202ENST00000374426 EXD3Q8N9H8 876 aa13.89□□□□□ -0.19
CXCL12-202ENST00000374426 PLA2G15Q8NCC3 412 aa13.89□□□□□ -0.19
CXCL12-202ENST00000374426 GPR156Q8NFN8 814 aa13.89□□□□□ -0.19
CXCL12-202ENST00000374426 WDR92Q96MX6 357 aa13.89□□□□□ -0.19
CXCL12-202ENST00000374426 ZNF641Q96N77 438 aaPredicted RBP13.89□□□□□ -0.19
CXCL12-202ENST00000374426 STRADBQ9C0K7 418 aa13.89□□□□□ -0.19
CXCL12-202ENST00000374426 VPS16Q9H269 839 aa13.89□□□□□ -0.19
CXCL12-202ENST00000374426 LRRN3Q9H3W5 708 aa13.89□□□□□ -0.19
CXCL12-202ENST00000374426 WDR70Q9NW82 654 aa13.89□□□□□ -0.19
CXCL12-202ENST00000374426 UBA2Q9UBT2 640 aaPredicted RBP13.89□□□□□ -0.19
CXCL12-202ENST00000374426 FZD10Q9ULW2 581 aa13.89□□□□□ -0.19
CXCL12-202ENST00000374426 DGKBQ9Y6T7 804 aa13.89□□□□□ -0.19
CXCL12-202ENST00000374426 FLNCQ14315 2725 aa13.89□□□□□ -0.19
CXCL12-202ENST00000374426 J3KR12 359 aa13.88□□□□□ -0.19
CXCL12-202ENST00000374426 CALB1P05937 261 aa13.88□□□□□ -0.19
CXCL12-202ENST00000374426 STAT1P42224 750 aa13.88□□□□□ -0.19
CXCL12-202ENST00000374426 RGRP47804 291 aa13.88□□□□□ -0.19
CXCL12-202ENST00000374426 RPL7AP62424 266 aaKnown RBP13.88□□□□□ -0.19
CXCL12-202ENST00000374426 MTM1Q13496 603 aa13.88□□□□□ -0.19
CXCL12-202ENST00000374426 GRM3Q14832 879 aa13.88□□□□□ -0.19
CXCL12-202ENST00000374426 KRT31Q15323 416 aa13.88□□□□□ -0.19
CXCL12-202ENST00000374426 CDKAL1Q5VV42 579 aa13.88□□□□□ -0.19
CXCL12-202ENST00000374426 ERAP2Q6P179 960 aa13.88□□□□□ -0.19
CXCL12-202ENST00000374426 MON1BQ7L1V2 547 aa13.88□□□□□ -0.19
CXCL12-202ENST00000374426 CCNJLQ8IV13 435 aa13.88□□□□□ -0.19
CXCL12-202ENST00000374426 SFTPA2Q8IWL1 248 aa13.88□□□□□ -0.19
CXCL12-202ENST00000374426 OR6C4Q8NGE1 309 aa13.88□□□□□ -0.19
CXCL12-202ENST00000374426 OR1E3Q8WZA6 343 aa13.88□□□□□ -0.19
CXCL12-202ENST00000374426 TMEM74Q96NL1 305 aa13.88□□□□□ -0.19
CXCL12-202ENST00000374426 CLMPQ9H6B4 373 aa13.88□□□□□ -0.19
CXCL12-202ENST00000374426 LRRC19Q9H756 370 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms