RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 ZSWIM9Q86XI8 627 aa11.02□□□□□ -0.65
BRCC3-204ENST00000369462 MMAAQ8IVH4 418 aaKnown RBP11.02□□□□□ -0.65
BRCC3-204ENST00000369462 FBXO36Q8NEA4 188 aa11.02□□□□□ -0.65
BRCC3-204ENST00000369462 PIH1D2Q8WWB5 315 aa11.02□□□□□ -0.65
BRCC3-204ENST00000369462 CAVIN3Q969G5 261 aa11.02□□□□□ -0.65
BRCC3-204ENST00000369462 LRIG1Q96JA1 1093 aa11.02□□□□□ -0.65
BRCC3-204ENST00000369462 ARFGAP3Q9NP61 516 aa11.02□□□□□ -0.65
BRCC3-204ENST00000369462 MRPS17Q9Y2R5 130 aaKnown RBP11.02□□□□□ -0.65
BRCC3-204ENST00000369462 TEX264Q9Y6I9 313 aa11.02□□□□□ -0.65
BRCC3-204ENST00000369462 MUC22E2RYF6 1773 aaPredicted RBP11.02□□□□□ -0.65
BRCC3-204ENST00000369462 TTC28Q96AY4 2481 aa11.02□□□□□ -0.65
BRCC3-204ENST00000369462 CHRNB1P11230 501 aa11.02□□□□□ -0.65
BRCC3-204ENST00000369462 HOXB2P14652 356 aa11.02□□□□□ -0.65
BRCC3-204ENST00000369462 TARSP26639 723 aaKnown RBP11.02□□□□□ -0.65
BRCC3-204ENST00000369462 CAMK2GQ13555 558 aaPredicted RBP11.02□□□□□ -0.65
BRCC3-204ENST00000369462 PTPRRQ15256 657 aa11.02□□□□□ -0.65
BRCC3-204ENST00000369462 KIAA1211LQ6NV74 962 aa11.02□□□□□ -0.65
BRCC3-204ENST00000369462 CAPN12Q6ZSI9 719 aa11.02□□□□□ -0.65
BRCC3-204ENST00000369462 CACUL1Q86Y37 369 aa11.02□□□□□ -0.65
BRCC3-204ENST00000369462 PIP4K2CQ8TBX8 421 aa11.02□□□□□ -0.65
BRCC3-204ENST00000369462 BLOC1S5Q8TDH9 187 aa11.02□□□□□ -0.65
BRCC3-204ENST00000369462 ECHDC3Q96DC8 303 aa11.02□□□□□ -0.65
BRCC3-204ENST00000369462 GABRG3Q99928 467 aa11.02□□□□□ -0.65
BRCC3-204ENST00000369462 TRIM56Q9BRZ2 755 aaKnown RBP11.02□□□□□ -0.65
BRCC3-204ENST00000369462 OSBPL1AQ9BXW6 950 aa11.02□□□□□ -0.65
BRCC3-204ENST00000369462 FOXQ1Q9C009 403 aa11.02□□□□□ -0.65
BRCC3-204ENST00000369462 PHACTR1Q9C0D0 580 aa11.02□□□□□ -0.65
BRCC3-204ENST00000369462 IL22Q9GZX6 179 aa11.02□□□□□ -0.65
BRCC3-204ENST00000369462 CDC42EP4Q9H3Q1 356 aaKnown RBP11.02□□□□□ -0.65
BRCC3-204ENST00000369462 SAMD15Q9P1V8 674 aa11.02□□□□□ -0.65
BRCC3-204ENST00000369462 PPM1HQ9ULR3 514 aa11.02□□□□□ -0.65
BRCC3-204ENST00000369462 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.02□□□□□ -0.65
BRCC3-204ENST00000369462 KANSL1LA0AUZ9 987 aa11.01□□□□□ -0.65
BRCC3-204ENST00000369462 CPP00450 1065 aa11.01□□□□□ -0.65
BRCC3-204ENST00000369462 CTPS1P17812 591 aa11.01□□□□□ -0.65
BRCC3-204ENST00000369462 METAP1P53582 386 aa11.01□□□□□ -0.65
BRCC3-204ENST00000369462 PMS2P54278 862 aa11.01□□□□□ -0.65
BRCC3-204ENST00000369462 STARD6P59095 220 aa11.01□□□□□ -0.65
BRCC3-204ENST00000369462 STARD3Q14849 445 aa11.01□□□□□ -0.65
BRCC3-204ENST00000369462 QPCTQ16769 361 aa11.01□□□□□ -0.65
BRCC3-204ENST00000369462 Q6ZS52 159 aa11.01□□□□□ -0.65
BRCC3-204ENST00000369462 DSG4Q86SJ6 1040 aa11.01□□□□□ -0.65
BRCC3-204ENST00000369462 LRRC39Q96DD0 335 aa11.01□□□□□ -0.65
BRCC3-204ENST00000369462 EBNA1BP2Q99848 306 aaKnown RBP11.01□□□□□ -0.65
BRCC3-204ENST00000369462 TXLNGYQ9BZA5 131 aa11.01□□□□□ -0.65
BRCC3-204ENST00000369462 LMAN1LQ9HAT1 526 aa11.01□□□□□ -0.65
BRCC3-204ENST00000369462 CHRAC1Q9NRG0 131 aa11.01□□□□□ -0.65
BRCC3-204ENST00000369462 POLR3BQ9NW08 1133 aaPredicted RBP11.01□□□□□ -0.65
BRCC3-204ENST00000369462 CCDC78A2IDD5 438 aa11.01□□□□□ -0.65
BRCC3-204ENST00000369462 FAM170BA6NMN3 283 aa11.01□□□□□ -0.65
BRCC3-204ENST00000369462 DYNC1I1O14576 645 aa11.01□□□□□ -0.65
BRCC3-204ENST00000369462 ACSL3O95573 720 aa11.01□□□□□ -0.65
BRCC3-204ENST00000369462 ALADP13716 330 aa11.01□□□□□ -0.65
BRCC3-204ENST00000369462 RPL26P61254 145 aaKnown RBP11.01□□□□□ -0.65
BRCC3-204ENST00000369462 MSLNQ13421 630 aaPredicted RBP11.01□□□□□ -0.65
BRCC3-204ENST00000369462 SEPT6Q14141 434 aa11.01□□□□□ -0.65
BRCC3-204ENST00000369462 ZNF805Q5CZA5 627 aa11.01□□□□□ -0.65
BRCC3-204ENST00000369462 LRRC73Q5JTD7 316 aa11.01□□□□□ -0.65
BRCC3-204ENST00000369462 UBAP2Q5T6F2 1119 aaKnown RBP11.01□□□□□ -0.65
BRCC3-204ENST00000369462 PKN3Q6P5Z2 889 aa11.01□□□□□ -0.65
BRCC3-204ENST00000369462 RELL1Q8IUW5 271 aa11.01□□□□□ -0.65
BRCC3-204ENST00000369462 PALM2Q8IXS6 379 aa11.01□□□□□ -0.65
BRCC3-204ENST00000369462 ZNF687Q8N1G0 1237 aa11.01□□□□□ -0.65
BRCC3-204ENST00000369462 TMIEQ8NEW7 156 aa11.01□□□□□ -0.65
BRCC3-204ENST00000369462 STAMBPL1Q96FJ0 436 aa11.01□□□□□ -0.65
BRCC3-204ENST00000369462 LTB4R2Q9NPC1 389 aa11.01□□□□□ -0.65
BRCC3-204ENST00000369462 ZC3H7BQ9UGR2 993 aaKnown RBP11.01□□□□□ -0.65
BRCC3-204ENST00000369462 RPL26L1Q9UNX3 145 aaKnown RBP11.01□□□□□ -0.65
BRCC3-204ENST00000369462 A0A0U1RQS6 177 aa11□□□□□ -0.65
BRCC3-204ENST00000369462 A0A1W2PQF6 199 aa11□□□□□ -0.65
BRCC3-204ENST00000369462 ALPIP09923 528 aa11□□□□□ -0.65
BRCC3-204ENST00000369462 ABL2P42684 1182 aa11□□□□□ -0.65
BRCC3-204ENST00000369462 GRIA4P48058 902 aa11□□□□□ -0.65
BRCC3-204ENST00000369462 POLR2LP62875 67 aaKnown RBP11□□□□□ -0.65
BRCC3-204ENST00000369462 BRAT1Q6PJG6 821 aa11□□□□□ -0.65
BRCC3-204ENST00000369462 CES3Q6UWW8 571 aa11□□□□□ -0.65
BRCC3-204ENST00000369462 TTC7BQ86TV6 843 aa11□□□□□ -0.65
BRCC3-204ENST00000369462 UBLCP1Q8WVY7 318 aaPredicted RBP11□□□□□ -0.65
BRCC3-204ENST00000369462 ANKRD7Q92527 254 aa11□□□□□ -0.65
BRCC3-204ENST00000369462 ZNF778Q96MU6 729 aa11□□□□□ -0.65
BRCC3-204ENST00000369462 MKRN2Q9H000 416 aaKnown RBP11□□□□□ -0.65
BRCC3-204ENST00000369462 NINJ2Q9NZG7 142 aa11□□□□□ -0.65
BRCC3-204ENST00000369462 SPO11Q9Y5K1 396 aa11□□□□□ -0.65
BRCC3-204ENST00000369462 A0A0J9YYE9 177 aa11□□□□□ -0.65
BRCC3-204ENST00000369462 C16orf96A6NNT2 1141 aa11□□□□□ -0.65
BRCC3-204ENST00000369462 A8MX80 341 aa11□□□□□ -0.65
BRCC3-204ENST00000369462 RNASEH1O60930 286 aaKnown RBP11□□□□□ -0.65
BRCC3-204ENST00000369462 TTC4O95801 387 aa11□□□□□ -0.65
BRCC3-204ENST00000369462 TRBC1P01850 177 aa11□□□□□ -0.65
BRCC3-204ENST00000369462 SSTR1P30872 391 aa11□□□□□ -0.65
BRCC3-204ENST00000369462 PSMD8P48556 350 aa11□□□□□ -0.65
BRCC3-204ENST00000369462 SATB1Q01826 763 aa11□□□□□ -0.65
BRCC3-204ENST00000369462 SEMG2Q02383 582 aa11□□□□□ -0.65
BRCC3-204ENST00000369462 CBLBQ13191 982 aa11□□□□□ -0.65
BRCC3-204ENST00000369462 UGP2Q16851 508 aa11□□□□□ -0.65
BRCC3-204ENST00000369462 PCID2Q5JVF3 399 aa11□□□□□ -0.65
BRCC3-204ENST00000369462 CFAP36Q96G28 342 aa11□□□□□ -0.65
BRCC3-204ENST00000369462 PABPC3Q9H361 631 aaKnown RBP11□□□□□ -0.65
BRCC3-204ENST00000369462 LRRC4CQ9HCJ2 640 aa11□□□□□ -0.65
BRCC3-204ENST00000369462 PHTF1Q9UMS5 762 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms