RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 GGNQ86UU5 652 aa5.97□□□□□ -1.45
RNU4-39P-201ENST00000362455 GHDCQ8N2G8 530 aa5.97□□□□□ -1.45
RNU4-39P-201ENST00000362455 FAM47BQ8NA70 645 aa5.97□□□□□ -1.45
RNU4-39P-201ENST00000362455 GRAPLQ8TC17 118 aaPredicted RBP5.97□□□□□ -1.45
RNU4-39P-201ENST00000362455 ZNF398Q8TD17 642 aa5.97□□□□□ -1.45
RNU4-39P-201ENST00000362455 HSPH1Q92598 858 aa5.97□□□□□ -1.45
RNU4-39P-201ENST00000362455 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.97□□□□□ -1.45
RNU4-39P-201ENST00000362455 DBNDD1Q9H9R9 158 aa5.97□□□□□ -1.45
RNU4-39P-201ENST00000362455 BRF2Q9HAW0 419 aa5.97□□□□□ -1.45
RNU4-39P-201ENST00000362455 PCDHB16Q9NRJ7 776 aa5.97□□□□□ -1.45
RNU4-39P-201ENST00000362455 IL1RAPL1Q9NZN1 696 aa5.97□□□□□ -1.45
RNU4-39P-201ENST00000362455 PEMTQ9UBM1 199 aa5.97□□□□□ -1.45
RNU4-39P-201ENST00000362455 SLC8A2Q9UPR5 921 aa5.97□□□□□ -1.45
RNU4-39P-201ENST00000362455 DHDHQ9UQ10 334 aa5.97□□□□□ -1.45
RNU4-39P-201ENST00000362455 PIAS3Q9Y6X2 628 aa5.97□□□□□ -1.45
RNU4-39P-201ENST00000362455 BCORQ6W2J9 1755 aa5.97□□□□□ -1.45
RNU4-39P-201ENST00000362455 COL4A1P02462 1669 aa5.96□□□□□ -1.46
RNU4-39P-201ENST00000362455 TEX13CA0A0J9YWL9 993 aa5.96□□□□□ -1.46
RNU4-39P-201ENST00000362455 C17orf113A0A1B0GUU1 675 aa5.96□□□□□ -1.46
RNU4-39P-201ENST00000362455 SLC22A23A1A5C7 686 aa5.96□□□□□ -1.46
RNU4-39P-201ENST00000362455 A6NCN8 305 aa5.96□□□□□ -1.46
RNU4-39P-201ENST00000362455 OR6C68A6NDL8 312 aa5.96□□□□□ -1.46
RNU4-39P-201ENST00000362455 NPIPB15A6NHN6 443 aaPredicted RBP5.96□□□□□ -1.46
RNU4-39P-201ENST00000362455 MSI1O43347 362 aaKnown RBP5.96□□□□□ -1.46
RNU4-39P-201ENST00000362455 C1QL1O75973 258 aa5.96□□□□□ -1.46
RNU4-39P-201ENST00000362455 CBX6O95503 412 aa5.96□□□□□ -1.46
RNU4-39P-201ENST00000362455 ABCD1P33897 745 aa5.96□□□□□ -1.46
RNU4-39P-201ENST00000362455 ARL1P40616 181 aaPredicted RBP5.96□□□□□ -1.46
RNU4-39P-201ENST00000362455 NAP1L1P55209 391 aaKnown RBP5.96□□□□□ -1.46
RNU4-39P-201ENST00000362455 AIMP1Q12904 312 aaKnown RBP5.96□□□□□ -1.46
RNU4-39P-201ENST00000362455 TNIP1Q15025 636 aa5.96□□□□□ -1.46
RNU4-39P-201ENST00000362455 TMEM119Q4V9L6 283 aa5.96□□□□□ -1.46
RNU4-39P-201ENST00000362455 KIAA1755Q5JYT7 1200 aa5.96□□□□□ -1.46
RNU4-39P-201ENST00000362455 FAM171A1Q5VUB5 890 aa5.96□□□□□ -1.46
RNU4-39P-201ENST00000362455 FCRLBQ6BAA4 426 aa5.96□□□□□ -1.46
RNU4-39P-201ENST00000362455 MOB2Q70IA6 237 aa5.96□□□□□ -1.46
RNU4-39P-201ENST00000362455 CPXM2Q8N436 756 aa5.96□□□□□ -1.46
RNU4-39P-201ENST00000362455 ARL14EPQ8N8R7 260 aaPredicted RBP5.96□□□□□ -1.46
RNU4-39P-201ENST00000362455 ZMIZ2Q8NF64 920 aa5.96□□□□□ -1.46
RNU4-39P-201ENST00000362455 CUL5Q93034 780 aa5.96□□□□□ -1.46
RNU4-39P-201ENST00000362455 RANBP17Q9H2T7 1088 aaKnown RBP5.96□□□□□ -1.46
RNU4-39P-201ENST00000362455 R3HDMLQ9H3Y0 253 aa5.96□□□□□ -1.46
RNU4-39P-201ENST00000362455 MPP6Q9NZW5 540 aa5.96□□□□□ -1.46
RNU4-39P-201ENST00000362455 NLKQ9UBE8 527 aa5.96□□□□□ -1.46
RNU4-39P-201ENST00000362455 TRMT112Q9UI30 125 aaKnown RBP5.96□□□□□ -1.46
RNU4-39P-201ENST00000362455 ICKQ9UPZ9 632 aa5.96□□□□□ -1.46
RNU4-39P-201ENST00000362455 INSL6Q9Y581 213 aa5.96□□□□□ -1.46
RNU4-39P-201ENST00000362455 DUOX1Q9NRD9 1551 aa5.96□□□□□ -1.46
RNU4-39P-201ENST00000362455 CDHR2Q9BYE9 1310 aa5.96□□□□□ -1.46
RNU4-39P-201ENST00000362455 ARFGEF2Q9Y6D5 1785 aa5.95□□□□□ -1.46
RNU4-39P-201ENST00000362455 PABPN1LA6NDY0 278 aaKnown RBP5.95□□□□□ -1.46
RNU4-39P-201ENST00000362455 TMEM247A6NEH6 219 aa5.95□□□□□ -1.46
RNU4-39P-201ENST00000362455 TGFB1I1O43294 461 aa5.95□□□□□ -1.46
RNU4-39P-201ENST00000362455 DOK2O60496 412 aa5.95□□□□□ -1.46
RNU4-39P-201ENST00000362455 NFATC1O95644 943 aa5.95□□□□□ -1.46
RNU4-39P-201ENST00000362455 SCGB1D1O95968 90 aa5.95□□□□□ -1.46
RNU4-39P-201ENST00000362455 ADAP00813 363 aa5.95□□□□□ -1.46
RNU4-39P-201ENST00000362455 SKIV2L2P42285 1042 aaKnown RBP5.95□□□□□ -1.46
RNU4-39P-201ENST00000362455 CYP2J2P51589 502 aa5.95□□□□□ -1.46
RNU4-39P-201ENST00000362455 DRG2P55039 364 aaKnown RBP5.95□□□□□ -1.46
RNU4-39P-201ENST00000362455 ARF3P61204 181 aaPredicted RBP5.95□□□□□ -1.46
RNU4-39P-201ENST00000362455 RPS3AP61247 264 aaKnown RBP5.95□□□□□ -1.46
RNU4-39P-201ENST00000362455 TUBA4AP68366 448 aa5.95□□□□□ -1.46
RNU4-39P-201ENST00000362455 ARF1P84077 181 aaKnown RBP5.95□□□□□ -1.46
RNU4-39P-201ENST00000362455 TFF2Q03403 129 aa5.95□□□□□ -1.46
RNU4-39P-201ENST00000362455 NEXNQ0ZGT2 675 aa5.95□□□□□ -1.46
RNU4-39P-201ENST00000362455 GALNT3Q14435 633 aa5.95□□□□□ -1.46
RNU4-39P-201ENST00000362455 PLK5Q496M5 336 aa5.95□□□□□ -1.46
RNU4-39P-201ENST00000362455 C5orf22Q49AR2 442 aa5.95□□□□□ -1.46
RNU4-39P-201ENST00000362455 VWA5B1Q5TIE3 1220 aa5.95□□□□□ -1.46
RNU4-39P-201ENST00000362455 FAM205BPQ63HN1 556 aa5.95□□□□□ -1.46
RNU4-39P-201ENST00000362455 TMEM81Q6P7N7 255 aa5.95□□□□□ -1.46
RNU4-39P-201ENST00000362455 PCSK4Q6UW60 755 aa5.95□□□□□ -1.46
RNU4-39P-201ENST00000362455 RRM2BQ7LG56 351 aa5.95□□□□□ -1.46
RNU4-39P-201ENST00000362455 PXKQ7Z7A4 578 aa5.95□□□□□ -1.46
RNU4-39P-201ENST00000362455 DNAAF1Q8NEP3 725 aa5.95□□□□□ -1.46
RNU4-39P-201ENST00000362455 OSR1Q8TAX0 266 aaPredicted RBP5.95□□□□□ -1.46
RNU4-39P-201ENST00000362455 ETNPPLQ8TBG4 499 aa5.95□□□□□ -1.46
RNU4-39P-201ENST00000362455 KAT2AQ92830 837 aa5.95□□□□□ -1.46
RNU4-39P-201ENST00000362455 MAP4K1Q92918 833 aa5.95□□□□□ -1.46
RNU4-39P-201ENST00000362455 KLHL29Q96CT2 875 aa5.95□□□□□ -1.46
RNU4-39P-201ENST00000362455 SAAL1Q96ER3 474 aa5.95□□□□□ -1.46
RNU4-39P-201ENST00000362455 NEUROD6Q96NK8 337 aa5.95□□□□□ -1.46
RNU4-39P-201ENST00000362455 SDF4Q9BRK5 362 aa5.95□□□□□ -1.46
RNU4-39P-201ENST00000362455 TSPYL4Q9UJ04 414 aa5.95□□□□□ -1.46
RNU4-39P-201ENST00000362455 SLC45A1Q9Y2W3 748 aa5.95□□□□□ -1.46
RNU4-39P-201ENST00000362455 PSAT1Q9Y617 370 aa5.95□□□□□ -1.46
RNU4-39P-201ENST00000362455 AOX1Q06278 1338 aa5.95□□□□□ -1.46
RNU4-39P-201ENST00000362455 CYP2D7A0A087X1C5 515 aa5.94□□□□□ -1.46
RNU4-39P-201ENST00000362455 A0A1W2PQM1 296 aa5.94□□□□□ -1.46
RNU4-39P-201ENST00000362455 TARSL2A2RTX5 802 aaKnown RBP5.94□□□□□ -1.46
RNU4-39P-201ENST00000362455 K7ENM7 598 aa5.94□□□□□ -1.46
RNU4-39P-201ENST00000362455 CHL1O00533 1208 aa5.94□□□□□ -1.46
RNU4-39P-201ENST00000362455 LDLRAD4O15165 306 aa5.94□□□□□ -1.46
RNU4-39P-201ENST00000362455 ECE2O60344 883 aa5.94□□□□□ -1.46
RNU4-39P-201ENST00000362455 PTP4A3O75365 173 aa5.94□□□□□ -1.46
RNU4-39P-201ENST00000362455 TIPRLO75663 272 aa5.94□□□□□ -1.46
RNU4-39P-201ENST00000362455 DDAH2O95865 285 aa5.94□□□□□ -1.46
RNU4-39P-201ENST00000362455 TFEBP19484 476 aa5.94□□□□□ -1.46
RNU4-39P-201ENST00000362455 PSMA4P25789 261 aaKnown RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms