RNA–Protein interactions for RNA: ENST00000338745.10

SATB1-201, Transcript of SATB homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SATB1, Length 7,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-201ENST00000338745 KCNA10Q16322 511 aa16.78■□□□□ 0.28
SATB1-201ENST00000338745 TTC23Q5W5X9 447 aa16.78■□□□□ 0.28
SATB1-201ENST00000338745 CRELD2Q6UXH1 353 aaPredicted RBP16.78■□□□□ 0.28
SATB1-201ENST00000338745 COLGALT2Q8IYK4 626 aa16.78■□□□□ 0.28
SATB1-201ENST00000338745 BHLHE41Q9C0J9 482 aaPredicted RBP16.78■□□□□ 0.28
SATB1-201ENST00000338745 SLC17A7Q9P2U7 560 aa16.78■□□□□ 0.28
SATB1-201ENST00000338745 SPATA31A1Q5TZJ5 1347 aa16.78■□□□□ 0.28
SATB1-201ENST00000338745 CTBP1Q13363 440 aa16.78■□□□□ 0.28
SATB1-201ENST00000338745 CARTPTQ16568 116 aa16.78■□□□□ 0.28
SATB1-201ENST00000338745 PAGE2Q7Z2X7 111 aa16.78■□□□□ 0.28
SATB1-201ENST00000338745 DAW1Q8N136 415 aa16.78■□□□□ 0.28
SATB1-201ENST00000338745 FAM98AQ8NCA5 519 aaKnown RBP16.78■□□□□ 0.28
SATB1-201ENST00000338745 CLPTM1LQ96KA5 538 aa16.78■□□□□ 0.28
SATB1-201ENST00000338745 RTKNQ9BST9 563 aa16.78■□□□□ 0.28
SATB1-201ENST00000338745 ARL8BQ9NVJ2 186 aa16.78■□□□□ 0.28
SATB1-201ENST00000338745 GGA2Q9UJY4 613 aa16.78■□□□□ 0.28
SATB1-201ENST00000338745 WWP2O00308 870 aa16.78■□□□□ 0.28
SATB1-201ENST00000338745 SCAMP3O14828 347 aaKnown RBP16.78■□□□□ 0.28
SATB1-201ENST00000338745 AREL1O15033 823 aa16.78■□□□□ 0.28
SATB1-201ENST00000338745 TGFB2P61812 414 aa16.78■□□□□ 0.28
SATB1-201ENST00000338745 MTA1Q13330 715 aa16.78■□□□□ 0.28
SATB1-201ENST00000338745 NEK5Q6P3R8 708 aa16.78■□□□□ 0.28
SATB1-201ENST00000338745 IQCF2Q8IXL9 164 aa16.78■□□□□ 0.28
SATB1-201ENST00000338745 CYP4X1Q8N118 509 aa16.78■□□□□ 0.28
SATB1-201ENST00000338745 ITGA2BP08514 1039 aa16.78■□□□□ 0.28
SATB1-201ENST00000338745 PDHA2P29803 388 aa16.78■□□□□ 0.28
SATB1-201ENST00000338745 CXorf57Q6NSI4 855 aaKnown RBP16.78■□□□□ 0.28
SATB1-201ENST00000338745 KANSL3Q9P2N6 904 aa16.78■□□□□ 0.28
SATB1-201ENST00000338745 FAM155BO75949 473 aa16.78■□□□□ 0.28
SATB1-201ENST00000338745 ATP5F1P24539 256 aaPredicted RBP16.78■□□□□ 0.28
SATB1-201ENST00000338745 SPPL2CQ8IUH8 684 aa16.78■□□□□ 0.28
SATB1-201ENST00000338745 FCRL4Q96PJ5 515 aa16.78■□□□□ 0.28
SATB1-201ENST00000338745 ATP6AP2A0A1C7CYW4 349 aa16.78■□□□□ 0.28
SATB1-201ENST00000338745 ATP6AP2O75787 350 aa16.78■□□□□ 0.28
SATB1-201ENST00000338745 GABRB2P47870 512 aa16.78■□□□□ 0.28
SATB1-201ENST00000338745 PPP3CAQ08209 521 aa16.78■□□□□ 0.28
SATB1-201ENST00000338745 C12orf56Q8IXR9 622 aa16.78■□□□□ 0.28
SATB1-201ENST00000338745 ZNF655Q8N720 491 aaPredicted RBP16.78■□□□□ 0.28
SATB1-201ENST00000338745 TRPV3Q8NET8 790 aa16.78■□□□□ 0.28
SATB1-201ENST00000338745 PHF12Q96QT6 1004 aa16.78■□□□□ 0.28
SATB1-201ENST00000338745 STARD7Q9NQZ5 370 aa16.78■□□□□ 0.28
SATB1-201ENST00000338745 FGF10O15520 208 aaPredicted RBP16.77■□□□□ 0.28
SATB1-201ENST00000338745 NOS2P35228 1153 aa16.77■□□□□ 0.28
SATB1-201ENST00000338745 DPYSQ14117 519 aa16.77■□□□□ 0.28
SATB1-201ENST00000338745 ZNHIT3Q15649 155 aaPredicted RBP16.77■□□□□ 0.28
SATB1-201ENST00000338745 C5orf22Q49AR2 442 aa16.77■□□□□ 0.28
SATB1-201ENST00000338745 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.77■□□□□ 0.28
SATB1-201ENST00000338745 CLIP4Q8N3C7 705 aa16.77■□□□□ 0.28
SATB1-201ENST00000338745 TDRD1Q9BXT4 1180 aaKnown RBP16.77■□□□□ 0.28
SATB1-201ENST00000338745 SPATC1LQ9H0A9 340 aa16.77■□□□□ 0.28
SATB1-201ENST00000338745 RAP2CQ9Y3L5 183 aa16.77■□□□□ 0.28
SATB1-201ENST00000338745 RGL2O15211 777 aa16.77■□□□□ 0.28
SATB1-201ENST00000338745 TBL1XO60907 577 aa16.77■□□□□ 0.28
SATB1-201ENST00000338745 HNF4AP41235 474 aa16.77■□□□□ 0.28
SATB1-201ENST00000338745 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.77■□□□□ 0.28
SATB1-201ENST00000338745 CTPS1P17812 591 aa16.77■□□□□ 0.28
SATB1-201ENST00000338745 ILF2Q12905 390 aaKnown RBP16.77■□□□□ 0.28
SATB1-201ENST00000338745 PTPN20Q4JDL3 420 aa16.77■□□□□ 0.28
SATB1-201ENST00000338745 RNF220Q5VTB9 566 aa16.77■□□□□ 0.28
SATB1-201ENST00000338745 ARCQ7LC44 396 aa16.77■□□□□ 0.28
SATB1-201ENST00000338745 CXorf40AQ8TE69 158 aa16.77■□□□□ 0.28
SATB1-201ENST00000338745 PANX1Q96RD7 426 aa16.77■□□□□ 0.28
SATB1-201ENST00000338745 IGFLR1Q9H665 355 aa16.77■□□□□ 0.28
SATB1-201ENST00000338745 SOHLH2Q9NX45 425 aa16.77■□□□□ 0.28
SATB1-201ENST00000338745 CCDC59Q9P031 241 aaKnown RBP16.77■□□□□ 0.28
SATB1-201ENST00000338745 DCDC2CA8MYV0 355 aa16.77■□□□□ 0.28
SATB1-201ENST00000338745 CLCN5P51795 746 aa16.77■□□□□ 0.28
SATB1-201ENST00000338745 NFE2Q16621 373 aaPredicted RBP16.77■□□□□ 0.28
SATB1-201ENST00000338745 FBXO42Q6P3S6 717 aa16.77■□□□□ 0.28
SATB1-201ENST00000338745 FBXL19Q6PCT2 694 aa16.77■□□□□ 0.28
SATB1-201ENST00000338745 KCNK18Q7Z418 384 aa16.77■□□□□ 0.28
SATB1-201ENST00000338745 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.77■□□□□ 0.28
SATB1-201ENST00000338745 PNPT1Q8TCS8 783 aaKnown RBP16.77■□□□□ 0.28
SATB1-201ENST00000338745 PPP1R14BQ96C90 147 aa16.77■□□□□ 0.28
SATB1-201ENST00000338745 SNRNP25Q9BV90 132 aaKnown RBP16.77■□□□□ 0.28
SATB1-201ENST00000338745 ATXN10Q9UBB4 475 aa16.77■□□□□ 0.28
SATB1-201ENST00000338745 SERPINA4P29622 427 aa16.77■□□□□ 0.27
SATB1-201ENST00000338745 EMID1Q96A84 441 aaPredicted RBP16.77■□□□□ 0.27
SATB1-201ENST00000338745 LINGO1Q96FE5 620 aa16.77■□□□□ 0.27
SATB1-201ENST00000338745 PPP3R2Q96LZ3 170 aa16.77■□□□□ 0.27
SATB1-201ENST00000338745 FERD3LQ96RJ6 166 aa16.77■□□□□ 0.27
SATB1-201ENST00000338745 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.77■□□□□ 0.27
SATB1-201ENST00000338745 PTPRMP28827 1452 aa16.77■□□□□ 0.27
SATB1-201ENST00000338745 CASKO14936 926 aa16.77■□□□□ 0.27
SATB1-201ENST00000338745 PTPN1P18031 435 aaKnown RBP16.77■□□□□ 0.27
SATB1-201ENST00000338745 MAXP61244 160 aa16.77■□□□□ 0.27
SATB1-201ENST00000338745 SEMA5AQ13591 1074 aa16.77■□□□□ 0.27
SATB1-201ENST00000338745 RETSATQ6NUM9 610 aa16.77■□□□□ 0.27
SATB1-201ENST00000338745 SLC35C1Q96A29 364 aa16.77■□□□□ 0.27
SATB1-201ENST00000338745 S100A14Q9HCY8 104 aa16.77■□□□□ 0.27
SATB1-201ENST00000338745 A0A088AWK7 358 aa16.76■□□□□ 0.27
SATB1-201ENST00000338745 RFXANKO14593 260 aa16.76■□□□□ 0.27
SATB1-201ENST00000338745 KRT33AO76009 404 aa16.76■□□□□ 0.27
SATB1-201ENST00000338745 PIRTP0C851 137 aa16.76■□□□□ 0.27
SATB1-201ENST00000338745 ZNF10P21506 573 aaPredicted RBP16.76■□□□□ 0.27
SATB1-201ENST00000338745 NBPF12Q5TAG4 269 aaPredicted RBP16.76■□□□□ 0.27
SATB1-201ENST00000338745 NKAPQ8N5F7 415 aaKnown RBP16.76■□□□□ 0.27
SATB1-201ENST00000338745 EPS8L1Q8TE68 723 aa16.76■□□□□ 0.27
SATB1-201ENST00000338745 TP53INP1Q96A56 240 aa16.76■□□□□ 0.27
SATB1-201ENST00000338745 VAT1Q99536 393 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms