RNA–Protein interactions for RNA: YGL248W

PDE1, Transcript of Low-affinity cyclic AMP phosphodiesterase, yeast

Gene PDE1, Length 1,110 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDE1	YGL248W	PLP2	Q12017	286 aa		6.28	□□□□□ -1.4
PDE1	YGL248W	RPP1A	P05318	106 aa	Predicted RBP	6.27	□□□□□ -1.41
PDE1	YGL248W	SRM1	P21827	482 aa		6.27	□□□□□ -1.41
PDE1	YGL248W	DAS1	P47005	663 aa		6.27	□□□□□ -1.41
PDE1	YGL248W	HOS2	P53096	452 aa	Predicted RBP	6.27	□□□□□ -1.41
PDE1	YGL248W	PEX8	P53248	589 aa		6.27	□□□□□ -1.41
PDE1	YGL248W	YOR378W	Q08902	515 aa		6.27	□□□□□ -1.41
PDE1	YGL248W	SLX4	Q12098	748 aa		6.27	□□□□□ -1.41
PDE1	YGL248W	TSC13	Q99190	310 aa		6.27	□□□□□ -1.41
PDE1	YGL248W	RAD4	P14736	754 aa		6.26	□□□□□ -1.41
PDE1	YGL248W	YCK2	P23292	546 aa	Known RBP	6.26	□□□□□ -1.41
PDE1	YGL248W	MLF3	P32047	452 aa		6.26	□□□□□ -1.41
PDE1	YGL248W	NUP82	P40368	713 aa		6.26	□□□□□ -1.41
PDE1	YGL248W	PKH1	Q03407	766 aa		6.26	□□□□□ -1.41
PDE1	YGL248W	RMD1	Q03441	430 aa		6.26	□□□□□ -1.41
PDE1	YGL248W	ESF1	Q06344	628 aa	Known RBP	6.26	□□□□□ -1.41
PDE1	YGL248W	FOB1	O13329	566 aa		6.25	□□□□□ -1.41
PDE1	YGL248W	INH1	P01097	85 aa		6.25	□□□□□ -1.41
PDE1	YGL248W	RGP1	P16664	663 aa		6.25	□□□□□ -1.41
PDE1	YGL248W	HSE1	P38753	452 aa		6.25	□□□□□ -1.41
PDE1	YGL248W	SNF7	P39929	240 aa	Known RBP	6.25	□□□□□ -1.41
PDE1	YGL248W	VID27	P40157	782 aa		6.25	□□□□□ -1.41
PDE1	YGL248W	CWC15	Q03772	175 aa	Known RBP	6.25	□□□□□ -1.41
PDE1	YGL248W	SXM1	Q04175	944 aa	Known RBP	6.25	□□□□□ -1.41
PDE1	YGL248W	YDR215C	Q12240	137 aa		6.25	□□□□□ -1.41
PDE1	YGL248W	TMA7	Q3E764	64 aa	Known RBP	6.25	□□□□□ -1.41
PDE1	YGL248W	ATP4	P05626	244 aa		6.24	□□□□□ -1.41
PDE1	YGL248W	CYT1	P07143	309 aa		6.24	□□□□□ -1.41
PDE1	YGL248W	PEP12	P32854	288 aa		6.24	□□□□□ -1.41
PDE1	YGL248W	UBX7	P38349	436 aa		6.24	□□□□□ -1.41
PDE1	YGL248W	GDE1	Q02979	1223 aa		6.24	□□□□□ -1.41
PDE1	YGL248W	NUT2	Q06213	157 aa		6.24	□□□□□ -1.41
PDE1	YGL248W	NYV1	Q12255	253 aa		6.24	□□□□□ -1.41
PDE1	YGL248W	RTP1	Q12751	981 aa		6.24	□□□□□ -1.41
PDE1	YGL248W	VPS5	Q92331	675 aa		6.24	□□□□□ -1.41
PDE1	YGL248W	Q0182	Q9ZZW1	134 aa		6.24	□□□□□ -1.41
PDE1	YGL248W	HSP82	P02829	709 aa	Known RBP	6.23	□□□□□ -1.41
PDE1	YGL248W	SPS1	P08458	490 aa		6.23	□□□□□ -1.41
PDE1	YGL248W	PHO8	P11491	566 aa		6.23	□□□□□ -1.41
PDE1	YGL248W	SAS3	P34218	831 aa		6.23	□□□□□ -1.41
PDE1	YGL248W	MSC7	P38694	644 aa		6.23	□□□□□ -1.41
PDE1	YGL248W	YAP1801	P38856	637 aa		6.23	□□□□□ -1.41
PDE1	YGL248W	FYV10	P40492	516 aa		6.23	□□□□□ -1.41
PDE1	YGL248W	ACF4	P47129	309 aa		6.23	□□□□□ -1.41
PDE1	YGL248W	GLT1	Q12680	2145 aa	Known RBP	6.22	□□□□□ -1.41
PDE1	YGL248W	TY1B-A	O13527	1196 aa	Known RBP	6.22	□□□□□ -1.41
PDE1	YGL248W	GAL2	P13181	574 aa		6.22	□□□□□ -1.41
PDE1	YGL248W	MET4	P32389	672 aa		6.22	□□□□□ -1.41
PDE1	YGL248W	BOI1	P38041	980 aa	Known RBP	6.22	□□□□□ -1.41
PDE1	YGL248W	SLN1	P39928	1220 aa	Predicted RBP	6.22	□□□□□ -1.41
PDE1	YGL248W	HUL5	P53119	910 aa		6.22	□□□□□ -1.41
PDE1	YGL248W	CWC24	P53769	259 aa		6.22	□□□□□ -1.41
PDE1	YGL248W	PUF6	Q04373	656 aa	Known RBP	6.22	□□□□□ -1.41
PDE1	YGL248W	YDR341C	Q05506	607 aa	Known RBP	6.22	□□□□□ -1.41
PDE1	YGL248W	GRC3	Q07845	632 aa		6.22	□□□□□ -1.41
PDE1	YGL248W	RRI2	Q12348	645 aa		6.22	□□□□□ -1.41
PDE1	YGL248W	QCR6	P00127	147 aa		6.21	□□□□□ -1.42
PDE1	YGL248W	CYB2	P00175	591 aa		6.21	□□□□□ -1.42
PDE1	YGL248W	TPS3	P38426	1054 aa	Known RBP	6.21	□□□□□ -1.42
PDE1	YGL248W	CHZ1	P40019	153 aa	Predicted RBP	6.21	□□□□□ -1.42
PDE1	YGL248W	KTR7	P40504	517 aa		6.21	□□□□□ -1.42
PDE1	YGL248W	YLR125W	Q12138	136 aa		6.21	□□□□□ -1.42
PDE1	YGL248W	HSP42	Q12329	375 aa		6.21	□□□□□ -1.42
PDE1	YGL248W	NOP14	Q99207	810 aa	Known RBP	6.21	□□□□□ -1.42
PDE1	YGL248W	HAP4	P14064	554 aa		6.2	□□□□□ -1.42
PDE1	YGL248W	BRF1	P29056	596 aa		6.2	□□□□□ -1.42
PDE1	YGL248W	TAT1	P38085	619 aa		6.2	□□□□□ -1.42
PDE1	YGL248W	IES5	P40060	125 aa		6.2	□□□□□ -1.42
PDE1	YGL248W	SRB7	P47822	140 aa		6.2	□□□□□ -1.42
PDE1	YGL248W	GPI8	P49018	411 aa		6.2	□□□□□ -1.42
PDE1	YGL248W	CTF4	Q01454	927 aa		6.2	□□□□□ -1.42
PDE1	YGL248W	SRP1	Q02821	542 aa	Known RBP	6.2	□□□□□ -1.42
PDE1	YGL248W	PRP3	Q03338	469 aa	Predicted RBP	6.2	□□□□□ -1.42
PDE1	YGL248W	THI4	P32318	326 aa		6.19	□□□□□ -1.42
PDE1	YGL248W	PPH3	P32345	308 aa		6.19	□□□□□ -1.42
PDE1	YGL248W	CDC11	P32458	415 aa		6.19	□□□□□ -1.42
PDE1	YGL248W	PEP7	P32609	515 aa		6.19	□□□□□ -1.42
PDE1	YGL248W	MNR2	P35724	969 aa		6.19	□□□□□ -1.42
PDE1	YGL248W	AMN1	P38285	549 aa	Predicted RBP	6.19	□□□□□ -1.42
PDE1	YGL248W	SEC27	P41811	889 aa	Known RBP	6.19	□□□□□ -1.42
PDE1	YGL248W	MTR4	P47047	1073 aa	Known RBP	6.19	□□□□□ -1.42
PDE1	YGL248W	MTO1	P53070	669 aa		6.19	□□□□□ -1.42
PDE1	YGL248W	YNR029C	P53729	429 aa	Known RBP	6.19	□□□□□ -1.42
PDE1	YGL248W	SPC19	Q03954	165 aa		6.19	□□□□□ -1.42
PDE1	YGL248W	MCA1	Q08601	432 aa		6.19	□□□□□ -1.42
PDE1	YGL248W	FUR4	P05316	633 aa	Known RBP	6.18	□□□□□ -1.42
PDE1	YGL248W	MPH2	P0CD99	609 aa		6.18	□□□□□ -1.42
PDE1	YGL248W	PHO87	P25360	923 aa		6.18	□□□□□ -1.42
PDE1	YGL248W	GFD2	P25370	566 aa	Known RBP	6.18	□□□□□ -1.42
PDE1	YGL248W	GRX1	P25373	110 aa	Known RBP	6.18	□□□□□ -1.42
PDE1	YGL248W	MCM2	P29469	868 aa		6.18	□□□□□ -1.42
PDE1	YGL248W	HIR1	P32479	840 aa		6.18	□□□□□ -1.42
PDE1	YGL248W	APL2	P36000	726 aa	Predicted RBP	6.18	□□□□□ -1.42
PDE1	YGL248W	RRN3	P36070	627 aa		6.18	□□□□□ -1.42
PDE1	YGL248W	ACS2	P52910	683 aa	Known RBP	6.18	□□□□□ -1.42
PDE1	YGL248W	HEH2	Q03281	663 aa		6.18	□□□□□ -1.42
PDE1	YGL248W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	6.18	□□□□□ -1.42	not detected
PDE1	YGL248W	PNP1	Q05788	311 aa		6.18	□□□□□ -1.42
PDE1	YGL248W	YLR257W	Q06146	321 aa	Known RBP	6.18	□□□□□ -1.42
PDE1	YGL248W	PPM2	Q08282	695 aa		6.18	□□□□□ -1.42

Retrieved 100 of 5,963 RNA–protein pairs in 59.5 ms