RNA–Protein interactions for RNA: YGL248W

PDE1, Transcript of Low-affinity cyclic AMP phosphodiesterase, yeastyeast

Gene PDE1, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDE1YGL248W PLP2Q12017 286 aa6.28□□□□□ -1.4
PDE1YGL248W RPP1AP05318 106 aaPredicted RBP6.27□□□□□ -1.41
PDE1YGL248W SRM1P21827 482 aa6.27□□□□□ -1.41
PDE1YGL248W DAS1P47005 663 aa6.27□□□□□ -1.41
PDE1YGL248W HOS2P53096 452 aaPredicted RBP6.27□□□□□ -1.41
PDE1YGL248W PEX8P53248 589 aa6.27□□□□□ -1.41
PDE1YGL248W YOR378WQ08902 515 aa6.27□□□□□ -1.41
PDE1YGL248W SLX4Q12098 748 aa6.27□□□□□ -1.41
PDE1YGL248W TSC13Q99190 310 aa6.27□□□□□ -1.41
PDE1YGL248W RAD4P14736 754 aa6.26□□□□□ -1.41
PDE1YGL248W YCK2P23292 546 aaKnown RBP6.26□□□□□ -1.41
PDE1YGL248W MLF3P32047 452 aa6.26□□□□□ -1.41
PDE1YGL248W NUP82P40368 713 aa6.26□□□□□ -1.41
PDE1YGL248W PKH1Q03407 766 aa6.26□□□□□ -1.41
PDE1YGL248W RMD1Q03441 430 aa6.26□□□□□ -1.41
PDE1YGL248W ESF1Q06344 628 aaKnown RBP6.26□□□□□ -1.41
PDE1YGL248W FOB1O13329 566 aa6.25□□□□□ -1.41
PDE1YGL248W INH1P01097 85 aa6.25□□□□□ -1.41
PDE1YGL248W RGP1P16664 663 aa6.25□□□□□ -1.41
PDE1YGL248W HSE1P38753 452 aa6.25□□□□□ -1.41
PDE1YGL248W SNF7P39929 240 aaKnown RBP6.25□□□□□ -1.41
PDE1YGL248W VID27P40157 782 aa6.25□□□□□ -1.41
PDE1YGL248W CWC15Q03772 175 aaKnown RBP6.25□□□□□ -1.41
PDE1YGL248W SXM1Q04175 944 aaKnown RBP6.25□□□□□ -1.41
PDE1YGL248W YDR215CQ12240 137 aa6.25□□□□□ -1.41
PDE1YGL248W TMA7Q3E764 64 aaKnown RBP6.25□□□□□ -1.41
PDE1YGL248W ATP4P05626 244 aa6.24□□□□□ -1.41
PDE1YGL248W CYT1P07143 309 aa6.24□□□□□ -1.41
PDE1YGL248W PEP12P32854 288 aa6.24□□□□□ -1.41
PDE1YGL248W UBX7P38349 436 aa6.24□□□□□ -1.41
PDE1YGL248W GDE1Q02979 1223 aa6.24□□□□□ -1.41
PDE1YGL248W NUT2Q06213 157 aa6.24□□□□□ -1.41
PDE1YGL248W NYV1Q12255 253 aa6.24□□□□□ -1.41
PDE1YGL248W RTP1Q12751 981 aa6.24□□□□□ -1.41
PDE1YGL248W VPS5Q92331 675 aa6.24□□□□□ -1.41
PDE1YGL248W Q0182Q9ZZW1 134 aa6.24□□□□□ -1.41
PDE1YGL248W HSP82P02829 709 aaKnown RBP6.23□□□□□ -1.41
PDE1YGL248W SPS1P08458 490 aa6.23□□□□□ -1.41
PDE1YGL248W PHO8P11491 566 aa6.23□□□□□ -1.41
PDE1YGL248W SAS3P34218 831 aa6.23□□□□□ -1.41
PDE1YGL248W MSC7P38694 644 aa6.23□□□□□ -1.41
PDE1YGL248W YAP1801P38856 637 aa6.23□□□□□ -1.41
PDE1YGL248W FYV10P40492 516 aa6.23□□□□□ -1.41
PDE1YGL248W ACF4P47129 309 aa6.23□□□□□ -1.41
PDE1YGL248W GLT1Q12680 2145 aaKnown RBP6.22□□□□□ -1.41
PDE1YGL248W TY1B-AO13527 1196 aaKnown RBP6.22□□□□□ -1.41
PDE1YGL248W GAL2P13181 574 aa6.22□□□□□ -1.41
PDE1YGL248W MET4P32389 672 aa6.22□□□□□ -1.41
PDE1YGL248W BOI1P38041 980 aaKnown RBP6.22□□□□□ -1.41
PDE1YGL248W SLN1P39928 1220 aaPredicted RBP6.22□□□□□ -1.41
PDE1YGL248W HUL5P53119 910 aa6.22□□□□□ -1.41
PDE1YGL248W CWC24P53769 259 aa6.22□□□□□ -1.41
PDE1YGL248W PUF6Q04373 656 aaKnown RBP6.22□□□□□ -1.41
PDE1YGL248W YDR341CQ05506 607 aaKnown RBP6.22□□□□□ -1.41
PDE1YGL248W GRC3Q07845 632 aa6.22□□□□□ -1.41
PDE1YGL248W RRI2Q12348 645 aa6.22□□□□□ -1.41
PDE1YGL248W QCR6P00127 147 aa6.21□□□□□ -1.42
PDE1YGL248W CYB2P00175 591 aa6.21□□□□□ -1.42
PDE1YGL248W TPS3P38426 1054 aaKnown RBP6.21□□□□□ -1.42
PDE1YGL248W CHZ1P40019 153 aaPredicted RBP6.21□□□□□ -1.42
PDE1YGL248W KTR7P40504 517 aa6.21□□□□□ -1.42
PDE1YGL248W YLR125WQ12138 136 aa6.21□□□□□ -1.42
PDE1YGL248W HSP42Q12329 375 aa6.21□□□□□ -1.42
PDE1YGL248W NOP14Q99207 810 aaKnown RBP6.21□□□□□ -1.42
PDE1YGL248W HAP4P14064 554 aa6.2□□□□□ -1.42
PDE1YGL248W BRF1P29056 596 aa6.2□□□□□ -1.42
PDE1YGL248W TAT1P38085 619 aa6.2□□□□□ -1.42
PDE1YGL248W IES5P40060 125 aa6.2□□□□□ -1.42
PDE1YGL248W SRB7P47822 140 aa6.2□□□□□ -1.42
PDE1YGL248W GPI8P49018 411 aa6.2□□□□□ -1.42
PDE1YGL248W CTF4Q01454 927 aa6.2□□□□□ -1.42
PDE1YGL248W SRP1Q02821 542 aaKnown RBP6.2□□□□□ -1.42
PDE1YGL248W PRP3Q03338 469 aaPredicted RBP6.2□□□□□ -1.42
PDE1YGL248W THI4P32318 326 aa6.19□□□□□ -1.42
PDE1YGL248W PPH3P32345 308 aa6.19□□□□□ -1.42
PDE1YGL248W CDC11P32458 415 aa6.19□□□□□ -1.42
PDE1YGL248W PEP7P32609 515 aa6.19□□□□□ -1.42
PDE1YGL248W MNR2P35724 969 aa6.19□□□□□ -1.42
PDE1YGL248W AMN1P38285 549 aaPredicted RBP6.19□□□□□ -1.42
PDE1YGL248W SEC27P41811 889 aaKnown RBP6.19□□□□□ -1.42
PDE1YGL248W MTR4P47047 1073 aaKnown RBP6.19□□□□□ -1.42
PDE1YGL248W MTO1P53070 669 aa6.19□□□□□ -1.42
PDE1YGL248W YNR029CP53729 429 aaKnown RBP6.19□□□□□ -1.42
PDE1YGL248W SPC19Q03954 165 aa6.19□□□□□ -1.42
PDE1YGL248W MCA1Q08601 432 aa6.19□□□□□ -1.42
PDE1YGL248W FUR4P05316 633 aaKnown RBP6.18□□□□□ -1.42
PDE1YGL248W MPH2P0CD99 609 aa6.18□□□□□ -1.42
PDE1YGL248W PHO87P25360 923 aa6.18□□□□□ -1.42
PDE1YGL248W GFD2P25370 566 aaKnown RBP6.18□□□□□ -1.42
PDE1YGL248W GRX1P25373 110 aaKnown RBP6.18□□□□□ -1.42
PDE1YGL248W MCM2P29469 868 aa6.18□□□□□ -1.42
PDE1YGL248W HIR1P32479 840 aa6.18□□□□□ -1.42
PDE1YGL248W APL2P36000 726 aaPredicted RBP6.18□□□□□ -1.42
PDE1YGL248W RRN3P36070 627 aa6.18□□□□□ -1.42
PDE1YGL248W ACS2P52910 683 aaKnown RBP6.18□□□□□ -1.42
PDE1YGL248W HEH2Q03281 663 aa6.18□□□□□ -1.42
PDE1YGL248W NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.18□□□□□ -1.42not detected
PDE1YGL248W PNP1Q05788 311 aa6.18□□□□□ -1.42
PDE1YGL248W YLR257WQ06146 321 aaKnown RBP6.18□□□□□ -1.42
PDE1YGL248W PPM2Q08282 695 aa6.18□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms