RNA–Protein interactions for RNA: ENST00000641314.1

PHGDH-214, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-214ENST00000641314 IQSEC2Q5JU85 1478 aa23.34■■□□□ 1.33
PHGDH-214ENST00000641314 RTL1A6NKG5 1358 aa23.34■■□□□ 1.33
PHGDH-214ENST00000641314 CRYBG1Q9Y4K1 1723 aa23.34■■□□□ 1.33
PHGDH-214ENST00000641314 CERKQ8TCT0 537 aa23.33■■□□□ 1.33
PHGDH-214ENST00000641314 ARHGEF25Q86VW2 580 aa23.31■■□□□ 1.32
PHGDH-214ENST00000641314 ZC3H6P61129 1189 aaKnown RBP23.31■■□□□ 1.32
PHGDH-214ENST00000641314 RUNDC1Q96C34 613 aa23.31■■□□□ 1.32
PHGDH-214ENST00000641314 PHLPP1O60346 1717 aa23.3■■□□□ 1.32
PHGDH-214ENST00000641314 IP6K1Q92551 441 aa23.3■■□□□ 1.32
PHGDH-214ENST00000641314 APAF1O14727 1248 aa23.29■■□□□ 1.32
PHGDH-214ENST00000641314 HMOX1P09601 288 aa23.29■■□□□ 1.32
PHGDH-214ENST00000641314 LTV1Q96GA3 475 aaPredicted RBP23.29■■□□□ 1.32
PHGDH-214ENST00000641314 HAP1P54257 671 aaPredicted RBP23.28■■□□□ 1.32
PHGDH-214ENST00000641314 LRRC59Q96AG4 307 aaKnown RBP23.28■■□□□ 1.32
PHGDH-214ENST00000641314 ABCA3Q99758 1704 aa23.26■■□□□ 1.31
PHGDH-214ENST00000641314 FCHSD2O94868 740 aa23.26■■□□□ 1.31
PHGDH-214ENST00000641314 RSPH6AQ9H0K4 717 aa23.26■■□□□ 1.31
PHGDH-214ENST00000641314 PNNQ9H307 717 aaKnown RBP23.26■■□□□ 1.31
PHGDH-214ENST00000641314 MAPK8IP3Q9UPT6 1336 aa23.25■■□□□ 1.31
PHGDH-214ENST00000641314 RGPD1P0DJD0 1748 aa23.25■■□□□ 1.31
PHGDH-214ENST00000641314 PRKAR2BP31323 418 aa23.25■■□□□ 1.31
PHGDH-214ENST00000641314 PLEKHF1Q96S99 279 aa23.24■■□□□ 1.31
PHGDH-214ENST00000641314 COL16A1Q07092 1604 aaPredicted RBP23.24■■□□□ 1.31
PHGDH-214ENST00000641314 TCP11L2Q8N4U5 519 aa23.23■■□□□ 1.31
PHGDH-214ENST00000641314 SULT6B1Q6IMI4 303 aa23.23■■□□□ 1.31
PHGDH-214ENST00000641314 AEBP1Q8IUX7 1158 aa23.23■■□□□ 1.31
PHGDH-214ENST00000641314 RRP7AQ9Y3A4 280 aaKnown RBP23.23■■□□□ 1.31
PHGDH-214ENST00000641314 KIAA0232Q92628 1395 aa23.23■■□□□ 1.31
PHGDH-214ENST00000641314 NEFMP07197 916 aa23.22■■□□□ 1.31
PHGDH-214ENST00000641314 NEUROD2Q15784 382 aa23.22■■□□□ 1.31
PHGDH-214ENST00000641314 EYA1Q99502 592 aa23.22■■□□□ 1.31
PHGDH-214ENST00000641314 RGPD5Q99666 1765 aa23.21■■□□□ 1.31
PHGDH-214ENST00000641314 CPDO75976 1380 aa23.21■■□□□ 1.31
PHGDH-214ENST00000641314 CHRNA2Q15822 529 aa23.21■■□□□ 1.31
PHGDH-214ENST00000641314 AXIN2Q9Y2T1 843 aa23.2■■□□□ 1.3
PHGDH-214ENST00000641314 IGSF1Q8N6C5 1336 aa23.2■■□□□ 1.3
PHGDH-214ENST00000641314 ANKRD24Q8TF21 1146 aa23.19■■□□□ 1.3
PHGDH-214ENST00000641314 COL18A1P39060 1754 aa23.19■■□□□ 1.3
PHGDH-214ENST00000641314 PRDM11Q9NQV5 511 aa23.18■■□□□ 1.3
PHGDH-214ENST00000641314 COL22A1Q8NFW1 1626 aaPredicted RBP23.18■■□□□ 1.3
PHGDH-214ENST00000641314 ABCC6O95255 1503 aa23.17■■□□□ 1.3
PHGDH-214ENST00000641314 RGPD2P0DJD1 1756 aa23.17■■□□□ 1.3
PHGDH-214ENST00000641314 NGEFQ8N5V2 710 aa23.16■■□□□ 1.3
PHGDH-214ENST00000641314 PHACTR3Q96KR7 559 aa23.16■■□□□ 1.3
PHGDH-214ENST00000641314 USHBP1Q8N6Y0 703 aa23.15■■□□□ 1.3
PHGDH-214ENST00000641314 TMPOP42166 694 aaKnown RBP23.14■■□□□ 1.3
PHGDH-214ENST00000641314 NBPF6Q5VWK0 638 aa23.14■■□□□ 1.3
PHGDH-214ENST00000641314 NBPF4Q96M43 638 aa23.14■■□□□ 1.3
PHGDH-214ENST00000641314 ERBB3P21860 1342 aa23.14■■□□□ 1.29
PHGDH-214ENST00000641314 KDRP35968 1356 aa23.14■■□□□ 1.29
PHGDH-214ENST00000641314 PDE3BQ13370 1112 aa23.13■■□□□ 1.29
PHGDH-214ENST00000641314 ZNF521Q96K83 1311 aa23.13■■□□□ 1.29
PHGDH-214ENST00000641314 CSB-PGBD3P0DP91 1061 aa23.11■■□□□ 1.29
PHGDH-214ENST00000641314 RIPK4P57078 832 aa23.11■■□□□ 1.29
PHGDH-214ENST00000641314 NFE2L2Q16236 605 aa23.11■■□□□ 1.29
PHGDH-214ENST00000641314 WWC1Q8IX03 1113 aa23.11■■□□□ 1.29
PHGDH-214ENST00000641314 CDCA7LQ96GN5 454 aa23.11■■□□□ 1.29
PHGDH-214ENST00000641314 LMO7Q8WWI1 1683 aa23.1■■□□□ 1.29
PHGDH-214ENST00000641314 GOLGA2Q08379 1002 aa23.09■■□□□ 1.29
PHGDH-214ENST00000641314 CCDC27Q2M243 656 aa23.09■■□□□ 1.29
PHGDH-214ENST00000641314 NLRP2Q9NX02 1062 aa23.09■■□□□ 1.29
PHGDH-214ENST00000641314 CAMTA1Q9Y6Y1 1673 aa23.08■■□□□ 1.29
PHGDH-214ENST00000641314 FAM83GA6ND36 823 aa23.08■■□□□ 1.29
PHGDH-214ENST00000641314 NCBP3Q53F19 620 aaKnown RBP23.08■■□□□ 1.29
PHGDH-214ENST00000641314 PHF23Q9BUL5 403 aaPredicted RBP23.07■■□□□ 1.28
PHGDH-214ENST00000641314 FAM208AQ9UK61 1670 aaKnown RBP23.07■■□□□ 1.28
PHGDH-214ENST00000641314 NUTM2BA6NNL0 878 aaPredicted RBP23.06■■□□□ 1.28
PHGDH-214ENST00000641314 NUTM2EB1AL46 878 aaPredicted RBP23.06■■□□□ 1.28
PHGDH-214ENST00000641314 NUTM2AQ8IVF1 878 aaPredicted RBP23.06■■□□□ 1.28
PHGDH-214ENST00000641314 TRIM35Q9UPQ4 493 aa23.06■■□□□ 1.28
PHGDH-214ENST00000641314 DLG5Q8TDM6 1919 aa23.06■■□□□ 1.28
PHGDH-214ENST00000641314 NCAPD2Q15021 1401 aa23.05■■□□□ 1.28
PHGDH-214ENST00000641314 COL14A1Q05707 1796 aaKnown RBP23.04■■□□□ 1.28
PHGDH-214ENST00000641314 COL5A2P05997 1499 aaPredicted RBP23.04■■□□□ 1.28
PHGDH-214ENST00000641314 ADAMTS2O95450 1211 aa23.04■■□□□ 1.28
PHGDH-214ENST00000641314 JCADQ9P266 1359 aa23.04■■□□□ 1.28
PHGDH-214ENST00000641314 MTHFSDQ2M296 383 aaKnown RBP23.03■■□□□ 1.28
PHGDH-214ENST00000641314 WDR63Q8IWG1 891 aa23.03■■□□□ 1.28
PHGDH-214ENST00000641314 STRN4Q9NRL3 753 aa23.03■■□□□ 1.28
PHGDH-214ENST00000641314 EVA1CP58658 441 aa23.02■■□□□ 1.28
PHGDH-214ENST00000641314 WDR17Q8IZU2 1322 aa23.02■■□□□ 1.28
PHGDH-214ENST00000641314 HSPA1LP34931 641 aa23.01■■□□□ 1.27
PHGDH-214ENST00000641314 SLFN5Q08AF3 891 aa23.01■■□□□ 1.27
PHGDH-214ENST00000641314 LMOD3Q0VAK6 560 aa23.01■■□□□ 1.27
PHGDH-214ENST00000641314 SPINK5Q9NQ38 1064 aaPredicted RBP23.01■■□□□ 1.27
PHGDH-214ENST00000641314 E9PSI1 815 aa23.01■■□□□ 1.27
PHGDH-214ENST00000641314 TOM1L2Q6ZVM7 507 aa23.01■■□□□ 1.27
PHGDH-214ENST00000641314 GAS2L2Q8NHY3 880 aa23.01■■□□□ 1.27
PHGDH-214ENST00000641314 BTG4Q9NY30 223 aa23.01■■□□□ 1.27
PHGDH-214ENST00000641314 PLCH1Q4KWH8 1693 aa22.98■■□□□ 1.27
PHGDH-214ENST00000641314 DUSP27Q5VZP5 1158 aa22.97■■□□□ 1.27
PHGDH-214ENST00000641314 RAPGEF4Q8WZA2 1011 aa22.97■■□□□ 1.27
PHGDH-214ENST00000641314 THUMPD2Q9BTF0 503 aaKnown RBP22.97■■□□□ 1.27
PHGDH-214ENST00000641314 LARP1Q6PKG0 1096 aaKnown RBP22.97■■□□□ 1.27
PHGDH-214ENST00000641314 DCTN1Q14203 1278 aa22.96■■□□□ 1.27
PHGDH-214ENST00000641314 PLEKHO1Q53GL0 409 aaPredicted RBP22.96■■□□□ 1.27
PHGDH-214ENST00000641314 TATP17735 454 aaPredicted RBP22.95■■□□□ 1.26
PHGDH-214ENST00000641314 TRMT2AQ8IZ69 625 aaKnown RBP22.95■■□□□ 1.26
PHGDH-214ENST00000641314 MEGF6O75095 1541 aa22.94■■□□□ 1.26
PHGDH-214ENST00000641314 CALD1Q05682 793 aaKnown RBP22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms