RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 AMPHP49418 695 aa17.98■□□□□ 0.47
GTF3A-209ENST00000640289 QTRT2Q9H974 415 aaKnown RBP17.98■□□□□ 0.47
GTF3A-209ENST00000640289 COL18A1P39060 1754 aa17.98■□□□□ 0.47
GTF3A-209ENST00000640289 HOXC9P31274 260 aa17.97■□□□□ 0.47
GTF3A-209ENST00000640289 IP6K1Q92551 441 aa17.97■□□□□ 0.47
GTF3A-209ENST00000640289 POLKQ9UBT6 870 aa17.97■□□□□ 0.47
GTF3A-209ENST00000640289 ATRNO75882 1429 aa17.97■□□□□ 0.47
GTF3A-209ENST00000640289 LTN1O94822 1766 aa17.96■□□□□ 0.47
GTF3A-209ENST00000640289 COL5A2P05997 1499 aaPredicted RBP17.96■□□□□ 0.47
GTF3A-209ENST00000640289 NRAPQ86VF7 1730 aa17.96■□□□□ 0.47
GTF3A-209ENST00000640289 NWD2Q9ULI1 1742 aa17.96■□□□□ 0.47
GTF3A-209ENST00000640289 PPM1GO15355 546 aaPredicted RBP17.96■□□□□ 0.47
GTF3A-209ENST00000640289 EVA1CP58658 441 aa17.96■□□□□ 0.47
GTF3A-209ENST00000640289 TRPC5Q9UL62 973 aaPredicted RBP17.96■□□□□ 0.47
GTF3A-209ENST00000640289 VPS72Q15906 364 aa17.95■□□□□ 0.46
GTF3A-209ENST00000640289 LARP1Q6PKG0 1096 aaKnown RBP17.95■□□□□ 0.46
GTF3A-209ENST00000640289 PEAK1Q9H792 1746 aa17.95■□□□□ 0.46
GTF3A-209ENST00000640289 RTL1A6NKG5 1358 aa17.94■□□□□ 0.46
GTF3A-209ENST00000640289 ABCC6O95255 1503 aa17.94■□□□□ 0.46
GTF3A-209ENST00000640289 HSP90AB2PQ58FF8 381 aa17.94■□□□□ 0.46
GTF3A-209ENST00000640289 CCDC9Q9Y3X0 531 aaKnown RBP17.94■□□□□ 0.46
GTF3A-209ENST00000640289 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.94■□□□□ 0.46
GTF3A-209ENST00000640289 FLT4P35916 1363 aa17.93■□□□□ 0.46
GTF3A-209ENST00000640289 ANKRD24Q8TF21 1146 aa17.93■□□□□ 0.46
GTF3A-209ENST00000640289 LTV1Q96GA3 475 aaPredicted RBP17.93■□□□□ 0.46
GTF3A-209ENST00000640289 BLMP54132 1417 aaPredicted RBP17.92■□□□□ 0.46
GTF3A-209ENST00000640289 CSB-PGBD3P0DP91 1061 aa17.92■□□□□ 0.46
GTF3A-209ENST00000640289 GJD4Q96KN9 370 aaPredicted RBP17.92■□□□□ 0.46
GTF3A-209ENST00000640289 ERBB3P21860 1342 aa17.92■□□□□ 0.46
GTF3A-209ENST00000640289 SMG6Q86US8 1419 aaKnown RBP17.91■□□□□ 0.46
GTF3A-209ENST00000640289 USP35Q9P2H5 1018 aa17.91■□□□□ 0.46
GTF3A-209ENST00000640289 SPATA31A5Q5VU36 1347 aa17.91■□□□□ 0.46
GTF3A-209ENST00000640289 SPATA31A7Q8IWB4 1347 aa17.91■□□□□ 0.46
GTF3A-209ENST00000640289 WDR17Q8IZU2 1322 aa17.91■□□□□ 0.46
GTF3A-209ENST00000640289 RGPD5Q99666 1765 aa17.91■□□□□ 0.46
GTF3A-209ENST00000640289 KIF24Q5T7B8 1368 aa17.91■□□□□ 0.46
GTF3A-209ENST00000640289 PARD3Q8TEW0 1356 aa17.91■□□□□ 0.46
GTF3A-209ENST00000640289 TOM1L2Q6ZVM7 507 aa17.9■□□□□ 0.46
GTF3A-209ENST00000640289 INSRP06213 1382 aa17.9■□□□□ 0.46
GTF3A-209ENST00000640289 GLI3P10071 1580 aa17.89■□□□□ 0.45
GTF3A-209ENST00000640289 RXRBP28702 533 aa17.89■□□□□ 0.45
GTF3A-209ENST00000640289 MTHFSP49914 203 aa17.89■□□□□ 0.45
GTF3A-209ENST00000640289 RBM6P78332 1123 aaKnown RBP17.89■□□□□ 0.45
GTF3A-209ENST00000640289 SPATA31A1Q5TZJ5 1347 aa17.89■□□□□ 0.45
GTF3A-209ENST00000640289 CRB1P82279 1406 aa17.89■□□□□ 0.45
GTF3A-209ENST00000640289 PPP2R1AP30153 589 aa17.88■□□□□ 0.45
GTF3A-209ENST00000640289 MAP2P11137 1827 aaKnown RBP17.88■□□□□ 0.45
GTF3A-209ENST00000640289 NLRP2Q9NX02 1062 aa17.87■□□□□ 0.45
GTF3A-209ENST00000640289 CDK12Q9NYV4 1490 aaPredicted RBP17.86■□□□□ 0.45
GTF3A-209ENST00000640289 EIF4A2Q14240 407 aaKnown RBP17.85■□□□□ 0.45
GTF3A-209ENST00000640289 RALBP1Q15311 655 aa17.85■□□□□ 0.45
GTF3A-209ENST00000640289 FAM98CQ17RN3 349 aaKnown RBP17.85■□□□□ 0.45
GTF3A-209ENST00000640289 NBPF6Q5VWK0 638 aa17.84■□□□□ 0.45
GTF3A-209ENST00000640289 TCP11L2Q8N4U5 519 aa17.84■□□□□ 0.45
GTF3A-209ENST00000640289 NBPF4Q96M43 638 aa17.84■□□□□ 0.45
GTF3A-209ENST00000640289 CARD10Q9BWT7 1032 aa17.84■□□□□ 0.45
GTF3A-209ENST00000640289 PRKRIP1Q9H875 184 aaPredicted RBP17.84■□□□□ 0.45
GTF3A-209ENST00000640289 USHBP1Q8N6Y0 703 aa17.83■□□□□ 0.44
GTF3A-209ENST00000640289 RGS12O14924 1447 aa17.82■□□□□ 0.44
GTF3A-209ENST00000640289 ILDR2Q71H61 639 aa17.82■□□□□ 0.44
GTF3A-209ENST00000640289 A0A0G2JS52 829 aa17.81■□□□□ 0.44
GTF3A-209ENST00000640289 MYT1Q01538 1121 aa17.81■□□□□ 0.44
GTF3A-209ENST00000640289 BARGINQ6ZT62 677 aa17.81■□□□□ 0.44
GTF3A-209ENST00000640289 THRAP3Q9Y2W1 955 aaKnown RBP17.81■□□□□ 0.44
GTF3A-209ENST00000640289 MYBBP1AQ9BQG0 1328 aaKnown RBP17.8■□□□□ 0.44
GTF3A-209ENST00000640289 ONECUT3O60422 494 aaPredicted RBP17.8■□□□□ 0.44
GTF3A-209ENST00000640289 IL13P35225 146 aa17.8■□□□□ 0.44
GTF3A-209ENST00000640289 SEPT12Q8IYM1 358 aa17.8■□□□□ 0.44
GTF3A-209ENST00000640289 EYA1Q99502 592 aa17.8■□□□□ 0.44
GTF3A-209ENST00000640289 COL3A1P02461 1466 aaPredicted RBP17.8■□□□□ 0.44
GTF3A-209ENST00000640289 DIAPH1O60610 1272 aaKnown RBP17.78■□□□□ 0.44
GTF3A-209ENST00000640289 DISP2A7MBM2 1401 aa17.78■□□□□ 0.44
GTF3A-209ENST00000640289 RGPD2P0DJD1 1756 aa17.78■□□□□ 0.44
GTF3A-209ENST00000640289 FAM208AQ9UK61 1670 aaKnown RBP17.77■□□□□ 0.44
GTF3A-209ENST00000640289 ANP32CO43423 234 aa17.77■□□□□ 0.44
GTF3A-209ENST00000640289 CFAP53Q96M91 514 aa17.77■□□□□ 0.44
GTF3A-209ENST00000640289 THSD7AQ9UPZ6 1657 aa17.77■□□□□ 0.43
GTF3A-209ENST00000640289 IGSF1Q8N6C5 1336 aa17.76■□□□□ 0.43
GTF3A-209ENST00000640289 IL2RBP14784 551 aa17.76■□□□□ 0.43
GTF3A-209ENST00000640289 NCAPD2Q15021 1401 aa17.75■□□□□ 0.43
GTF3A-209ENST00000640289 MEGF6O75095 1541 aa17.74■□□□□ 0.43
GTF3A-209ENST00000640289 AEBP1Q8IUX7 1158 aa17.74■□□□□ 0.43
GTF3A-209ENST00000640289 U2SURPO15042 1029 aaKnown RBP17.73■□□□□ 0.43
GTF3A-209ENST00000640289 CDCA7Q9BWT1 371 aaPredicted RBP17.73■□□□□ 0.43
GTF3A-209ENST00000640289 DDB1Q16531 1140 aa17.72■□□□□ 0.43
GTF3A-209ENST00000640289 SULT6B1Q6IMI4 303 aa17.72■□□□□ 0.43
GTF3A-209ENST00000640289 RAPGEF4Q8WZA2 1011 aa17.72■□□□□ 0.43
GTF3A-209ENST00000640289 WNK3Q9BYP7 1800 aa17.72■□□□□ 0.43
GTF3A-209ENST00000640289 HMOX1P09601 288 aa17.71■□□□□ 0.43
GTF3A-209ENST00000640289 TATP17735 454 aaPredicted RBP17.71■□□□□ 0.43
GTF3A-209ENST00000640289 FAM182BQ5T319 152 aa17.71■□□□□ 0.43
GTF3A-209ENST00000640289 KRT27Q7Z3Y8 459 aa17.71■□□□□ 0.43
GTF3A-209ENST00000640289 RGPD1P0DJD0 1748 aa17.71■□□□□ 0.43
GTF3A-209ENST00000640289 LRRC37A3O60309 1634 aa17.71■□□□□ 0.43
GTF3A-209ENST00000640289 EXOC5O00471 708 aa17.7■□□□□ 0.42
GTF3A-209ENST00000640289 OVOS2A0A0G2JMS6 1433 aa17.7■□□□□ 0.42
GTF3A-209ENST00000640289 PARP4Q9UKK3 1724 aaKnown RBP17.69■□□□□ 0.42
GTF3A-209ENST00000640289 PDE3BQ13370 1112 aa17.69■□□□□ 0.42
GTF3A-209ENST00000640289 CCDC184Q52MB2 194 aa17.69■□□□□ 0.42
GTF3A-209ENST00000640289 DIEXFQ68CQ4 756 aaKnown RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms