RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 DDRGK1Q96HY6 314 aa11.86□□□□□ -0.51
RFC1-217ENST00000639695 CARD14Q9BXL6 1004 aa11.86□□□□□ -0.51
RFC1-217ENST00000639695 MAP4K5Q9Y4K4 846 aa11.86□□□□□ -0.51
RFC1-217ENST00000639695 CLK2P49760 499 aaKnown RBP11.85□□□□□ -0.51
RFC1-217ENST00000639695 FBXO31Q5XUX0 539 aaPredicted RBP11.85□□□□□ -0.51
RFC1-217ENST00000639695 ARMC2Q8NEN0 867 aa11.85□□□□□ -0.51
RFC1-217ENST00000639695 POLR3EQ9NVU0 708 aa11.85□□□□□ -0.51
RFC1-217ENST00000639695 NBPF14Q5TI25 921 aa11.84□□□□□ -0.51
RFC1-217ENST00000639695 CTDSPL2Q05D32 466 aa11.83□□□□□ -0.52
RFC1-217ENST00000639695 ERFEQ4G0M1 354 aa11.83□□□□□ -0.52
RFC1-217ENST00000639695 HELBQ8NG08 1087 aaPredicted RBP11.83□□□□□ -0.52
RFC1-217ENST00000639695 FAM117AQ9C073 453 aa11.83□□□□□ -0.52
RFC1-217ENST00000639695 UPP2O95045 317 aa11.81□□□□□ -0.52
RFC1-217ENST00000639695 CBLBQ13191 982 aa11.81□□□□□ -0.52
RFC1-217ENST00000639695 CCDC116Q8IYX3 515 aa11.81□□□□□ -0.52
RFC1-217ENST00000639695 GPR161Q8N6U8 529 aaKnown RBP11.81□□□□□ -0.52
RFC1-217ENST00000639695 KRT76Q01546 638 aa11.8□□□□□ -0.52
RFC1-217ENST00000639695 LRRN4Q8WUT4 740 aa11.79□□□□□ -0.52
RFC1-217ENST00000639695 EMILIN1Q9Y6C2 1016 aa11.79□□□□□ -0.52
RFC1-217ENST00000639695 PPP1R26Q5T8A7 1209 aaPredicted RBP11.78□□□□□ -0.52
RFC1-217ENST00000639695 TSEN34Q9BSV6 310 aaKnown RBP11.78□□□□□ -0.52
RFC1-217ENST00000639695 FIGNL2A6NMB9 653 aa11.76□□□□□ -0.53
RFC1-217ENST00000639695 TTLL8A6PVC2 850 aa11.76□□□□□ -0.53
RFC1-217ENST00000639695 OCSTAMPQ9BR26 566 aa11.76□□□□□ -0.53
RFC1-217ENST00000639695 PTSQ03393 145 aa11.75□□□□□ -0.53
RFC1-217ENST00000639695 FLIIQ13045 1269 aa11.75□□□□□ -0.53
RFC1-217ENST00000639695 GSK3AP49840 483 aa11.74□□□□□ -0.53
RFC1-217ENST00000639695 Q6ZVU0 165 aa11.74□□□□□ -0.53
RFC1-217ENST00000639695 GPKOWQ92917 476 aaPredicted RBP eCLIP11.74□□□□□ -0.53
RFC1-217ENST00000639695 NR6A1Q15406 480 aa11.73□□□□□ -0.53
RFC1-217ENST00000639695 ARHGAP9Q9BRR9 750 aa11.73□□□□□ -0.53
RFC1-217ENST00000639695 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.72□□□□□ -0.532e-9■■□□□ 14.2
RFC1-217ENST00000639695 PDXDC2PQ6P474 469 aa11.72□□□□□ -0.53
RFC1-217ENST00000639695 PROCA1Q8NCQ7 364 aaPredicted RBP11.72□□□□□ -0.53
RFC1-217ENST00000639695 AGBL1Q96MI9 1066 aa11.72□□□□□ -0.53
RFC1-217ENST00000639695 KCTD15Q96SI1 283 aaPredicted RBP11.72□□□□□ -0.53
RFC1-217ENST00000639695 GOPCQ9HD26 462 aa11.72□□□□□ -0.53
RFC1-217ENST00000639695 FKBPLQ9UIM3 349 aa11.72□□□□□ -0.53
RFC1-217ENST00000639695 SPINT1O43278 529 aa11.71□□□□□ -0.53
RFC1-217ENST00000639695 UBTFP17480 764 aaKnown RBP11.7□□□□□ -0.54
RFC1-217ENST00000639695 CNTNAP3BQ96NU0 1288 aa11.7□□□□□ -0.54
RFC1-217ENST00000639695 CNTNAP3Q9BZ76 1288 aa11.7□□□□□ -0.54
RFC1-217ENST00000639695 PGPEP1Q9NXJ5 209 aa11.69□□□□□ -0.54
RFC1-217ENST00000639695 CTSOP43234 321 aaPredicted RBP11.68□□□□□ -0.54
RFC1-217ENST00000639695 INTS6LQ5JSJ4 861 aaKnown RBP11.68□□□□□ -0.54
RFC1-217ENST00000639695 RNFT1Q5M7Z0 435 aa11.68□□□□□ -0.54
RFC1-217ENST00000639695 CCDC155Q8N6L0 562 aa11.68□□□□□ -0.54
RFC1-217ENST00000639695 EPS8L1Q8TE68 723 aa11.68□□□□□ -0.54
RFC1-217ENST00000639695 SLC10A4Q96EP9 437 aa11.68□□□□□ -0.54
RFC1-217ENST00000639695 COL25A1Q9BXS0 654 aaPredicted RBP11.67□□□□□ -0.54
RFC1-217ENST00000639695 INSM2Q96T92 566 aaPredicted RBP11.66□□□□□ -0.54
RFC1-217ENST00000639695 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.66□□□□□ -0.54
RFC1-217ENST00000639695 SLC35F4A4IF30 521 aa11.65□□□□□ -0.54
RFC1-217ENST00000639695 RELBQ01201 579 aa11.65□□□□□ -0.54
RFC1-217ENST00000639695 KCNMA1Q12791 1236 aa11.65□□□□□ -0.54
RFC1-217ENST00000639695 SKIV2LQ15477 1246 aaKnown RBP11.65□□□□□ -0.54
RFC1-217ENST00000639695 ZBTB33Q86T24 672 aa11.65□□□□□ -0.54
RFC1-217ENST00000639695 NANOS1Q8WY41 292 aaKnown RBP11.65□□□□□ -0.54
RFC1-217ENST00000639695 PCMTD1Q96MG8 357 aaPredicted RBP11.65□□□□□ -0.54
RFC1-217ENST00000639695 TMPRSS4Q9NRS4 437 aa11.65□□□□□ -0.54
RFC1-217ENST00000639695 ARID3AQ99856 593 aa11.64□□□□□ -0.55
RFC1-217ENST00000639695 PODXL2Q9NZ53 605 aa11.64□□□□□ -0.55
RFC1-217ENST00000639695 SH3D19Q5HYK7 790 aa11.63□□□□□ -0.55
RFC1-217ENST00000639695 PPP2R2DQ66LE6 453 aa11.63□□□□□ -0.55
RFC1-217ENST00000639695 ADAM32Q8TC27 787 aa11.63□□□□□ -0.55
RFC1-217ENST00000639695 HMX1Q9NP08 348 aaPredicted RBP11.63□□□□□ -0.55
RFC1-217ENST00000639695 LOC100996750A0A140TA64 210 aa11.62□□□□□ -0.55
RFC1-217ENST00000639695 KCTD17Q8N5Z5 321 aa11.62□□□□□ -0.55
RFC1-217ENST00000639695 WHAMMQ8TF30 809 aa11.62□□□□□ -0.55
RFC1-217ENST00000639695 KRTAP4-6Q9BYQ5 205 aa11.62□□□□□ -0.55
RFC1-217ENST00000639695 ZNF395Q9H8N7 513 aaPredicted RBP11.62□□□□□ -0.55
RFC1-217ENST00000639695 AP1G2O75843 785 aa11.61□□□□□ -0.55
RFC1-217ENST00000639695 CDV3Q9UKY7 258 aaKnown RBP11.61□□□□□ -0.55
RFC1-217ENST00000639695 ADAMTS8Q9UP79 889 aa11.61□□□□□ -0.55
RFC1-217ENST00000639695 ZC3H4Q9UPT8 1303 aaKnown RBP11.6□□□□□ -0.55
RFC1-217ENST00000639695 SENP3-EIF4A1A0A087X0R7 540 aa11.6□□□□□ -0.55
RFC1-217ENST00000639695 APBB1O00213 710 aa11.6□□□□□ -0.55
RFC1-217ENST00000639695 ITGA6P23229 1130 aa11.6□□□□□ -0.55
RFC1-217ENST00000639695 RAB15P59190 212 aa11.6□□□□□ -0.55
RFC1-217ENST00000639695 DHX9Q08211 1270 aaKnown RBP11.6□□□□□ -0.55
RFC1-217ENST00000639695 ZNF385CQ66K41 422 aaPredicted RBP11.6□□□□□ -0.55
RFC1-217ENST00000639695 VWA5B2Q8N398 1253 aa11.6□□□□□ -0.55
RFC1-217ENST00000639695 KDF1Q8NAX2 398 aaPredicted RBP11.6□□□□□ -0.55
RFC1-217ENST00000639695 RNF217Q8TC41 542 aa11.6□□□□□ -0.55
RFC1-217ENST00000639695 PTK2Q05397 1052 aa11.59□□□□□ -0.55
RFC1-217ENST00000639695 ZNF784Q8NCA9 323 aaPredicted RBP11.59□□□□□ -0.55
RFC1-217ENST00000639695 ADD1P35611 737 aaKnown RBP11.58□□□□□ -0.56
RFC1-217ENST00000639695 POLMQ9NP87 494 aaPredicted RBP11.58□□□□□ -0.56
RFC1-217ENST00000639695 LILRA1O75019 489 aa11.57□□□□□ -0.56
RFC1-217ENST00000639695 FOXD4L5Q5VV16 416 aaPredicted RBP11.57□□□□□ -0.56
RFC1-217ENST00000639695 CDC14CA4D256 554 aa11.56□□□□□ -0.56
RFC1-217ENST00000639695 GPSM3Q9Y4H4 160 aa11.56□□□□□ -0.56
RFC1-217ENST00000639695 ERVH48-1M5A8F1 160 aa11.55□□□□□ -0.56
RFC1-217ENST00000639695 RASSF7Q02833 373 aa11.55□□□□□ -0.56
RFC1-217ENST00000639695 A6NJR5 290 aa11.54□□□□□ -0.56
RFC1-217ENST00000639695 ARID3CA6NKF2 412 aa11.54□□□□□ -0.56
RFC1-217ENST00000639695 USP17L8P0C7I0 530 aa11.54□□□□□ -0.56
RFC1-217ENST00000639695 C1orf115Q9H7X2 142 aa11.54□□□□□ -0.56
RFC1-217ENST00000639695 CUEDC1Q9NWM3 386 aaPredicted RBP11.54□□□□□ -0.56
RFC1-217ENST00000639695 ADH1AP07327 375 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms