RNA–Protein interactions for RNA: ENST00000632629.1

NPHP3-ACAD11-202, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2

Gene NPHP3-ACAD11, Length 695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-202ENST00000632629 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.3□□□□□ -1.24
NPHP3-ACAD11-202ENST00000632629 PROCP04070 461 aa7.3□□□□□ -1.24
NPHP3-ACAD11-202ENST00000632629 SRSF11Q05519 484 aaKnown RBP7.3□□□□□ -1.24
NPHP3-ACAD11-202ENST00000632629 CCDC116Q8IYX3 515 aa7.3□□□□□ -1.24
NPHP3-ACAD11-202ENST00000632629 PSMG3-AS1Q96PY0 264 aa7.3□□□□□ -1.24
NPHP3-ACAD11-202ENST00000632629 C1QTNF2Q9BXJ5 285 aa7.3□□□□□ -1.24
NPHP3-ACAD11-202ENST00000632629 KRTAP9-2Q9BYQ4 174 aa7.3□□□□□ -1.24
NPHP3-ACAD11-202ENST00000632629 MAP4K5Q9Y4K4 846 aa7.3□□□□□ -1.24
NPHP3-ACAD11-202ENST00000632629 CNTNAP5Q8WYK1 1306 aa7.29□□□□□ -1.24
NPHP3-ACAD11-202ENST00000632629 CFAP99D6REC4 459 aa7.29□□□□□ -1.24
NPHP3-ACAD11-202ENST00000632629 CBLBQ13191 982 aa7.29□□□□□ -1.24
NPHP3-ACAD11-202ENST00000632629 ZC3H15Q8WU90 426 aaKnown RBP7.29□□□□□ -1.24
NPHP3-ACAD11-202ENST00000632629 ENAMQ9NRM1 1142 aa7.29□□□□□ -1.24
NPHP3-ACAD11-202ENST00000632629 PHF20L1A8MW92 1017 aa7.28□□□□□ -1.24
NPHP3-ACAD11-202ENST00000632629 AMHR2Q16671 573 aa7.28□□□□□ -1.24
NPHP3-ACAD11-202ENST00000632629 Q6ZVU0 165 aa7.28□□□□□ -1.24
NPHP3-ACAD11-202ENST00000632629 SH3RF1Q7Z6J0 888 aa7.28□□□□□ -1.24
NPHP3-ACAD11-202ENST00000632629 GALNT6Q8NCL4 622 aa7.28□□□□□ -1.24
NPHP3-ACAD11-202ENST00000632629 BCANQ96GW7 911 aa7.28□□□□□ -1.24
NPHP3-ACAD11-202ENST00000632629 K7ELQ4 463 aaPredicted RBP7.27□□□□□ -1.25
NPHP3-ACAD11-202ENST00000632629 Q8N3U1 123 aa7.27□□□□□ -1.25
NPHP3-ACAD11-202ENST00000632629 KRTAP9-6A0A140TA67 174 aa7.26□□□□□ -1.25
NPHP3-ACAD11-202ENST00000632629 TRMT44Q8IYL2 757 aaKnown RBP7.26□□□□□ -1.25
NPHP3-ACAD11-202ENST00000632629 BEND7Q8N7W2 519 aaPredicted RBP7.26□□□□□ -1.25
NPHP3-ACAD11-202ENST00000632629 PER1O15534 1290 aaPredicted RBP7.25□□□□□ -1.25
NPHP3-ACAD11-202ENST00000632629 GJA5P36382 358 aa7.25□□□□□ -1.25
NPHP3-ACAD11-202ENST00000632629 CTSOP43234 321 aaPredicted RBP7.25□□□□□ -1.25
NPHP3-ACAD11-202ENST00000632629 GAS6Q14393 721 aa7.25□□□□□ -1.25
NPHP3-ACAD11-202ENST00000632629 PPP1R26Q5T8A7 1209 aaPredicted RBP7.25□□□□□ -1.25
NPHP3-ACAD11-202ENST00000632629 PGPEP1Q9NXJ5 209 aa7.25□□□□□ -1.25
NPHP3-ACAD11-202ENST00000632629 PCDHB15Q9Y5E8 787 aa7.25□□□□□ -1.25
NPHP3-ACAD11-202ENST00000632629 SENP3-EIF4A1A0A087X0R7 540 aa7.24□□□□□ -1.25
NPHP3-ACAD11-202ENST00000632629 HRCP23327 699 aa7.24□□□□□ -1.25
NPHP3-ACAD11-202ENST00000632629 MAGEB6P1A0A0J9YX57 407 aa7.23□□□□□ -1.25
NPHP3-ACAD11-202ENST00000632629 RSBN1LQ6PCB5 846 aaPredicted RBP7.23□□□□□ -1.25
NPHP3-ACAD11-202ENST00000632629 SH3BP5LQ7L8J4 393 aa7.23□□□□□ -1.25
NPHP3-ACAD11-202ENST00000632629 ARMC2Q8NEN0 867 aa7.23□□□□□ -1.25
NPHP3-ACAD11-202ENST00000632629 AK7Q96M32 723 aa7.23□□□□□ -1.25
NPHP3-ACAD11-202ENST00000632629 AGBL1Q96MI9 1066 aa7.23□□□□□ -1.25
NPHP3-ACAD11-202ENST00000632629 INSM2Q96T92 566 aaPredicted RBP7.23□□□□□ -1.25
NPHP3-ACAD11-202ENST00000632629 DIXDC1Q155Q3 683 aa7.22□□□□□ -1.25
NPHP3-ACAD11-202ENST00000632629 PODNQ7Z5L7 613 aa7.22□□□□□ -1.25
NPHP3-ACAD11-202ENST00000632629 ZBTB3Q9H5J0 574 aa7.22□□□□□ -1.25
NPHP3-ACAD11-202ENST00000632629 NEDD1Q8NHV4 660 aa7.21□□□□□ -1.26
NPHP3-ACAD11-202ENST00000632629 CUEDC1Q9NWM3 386 aaPredicted RBP7.21□□□□□ -1.26
NPHP3-ACAD11-202ENST00000632629 BAG6P46379 1132 aa7.2□□□□□ -1.26
NPHP3-ACAD11-202ENST00000632629 RELBQ01201 579 aa7.2□□□□□ -1.26
NPHP3-ACAD11-202ENST00000632629 NBPF14Q5TI25 921 aa7.2□□□□□ -1.26
NPHP3-ACAD11-202ENST00000632629 RNF217Q8TC41 542 aa7.2□□□□□ -1.26
NPHP3-ACAD11-202ENST00000632629 BEGAINQ9BUH8 593 aa7.2□□□□□ -1.26
NPHP3-ACAD11-202ENST00000632629 TBC1D2Q9BYX2 928 aa7.2□□□□□ -1.26
NPHP3-ACAD11-202ENST00000632629 POLMQ9NP87 494 aaPredicted RBP7.2□□□□□ -1.26
NPHP3-ACAD11-202ENST00000632629 TTLL12Q14166 644 aaPredicted RBP7.19□□□□□ -1.26
NPHP3-ACAD11-202ENST00000632629 CARD14Q9BXL6 1004 aa7.19□□□□□ -1.26
NPHP3-ACAD11-202ENST00000632629 BCRP11274 1271 aa7.18□□□□□ -1.26
NPHP3-ACAD11-202ENST00000632629 ERFEQ4G0M1 354 aa7.18□□□□□ -1.26
NPHP3-ACAD11-202ENST00000632629 CABLES1Q8TDN4 633 aa7.18□□□□□ -1.26
NPHP3-ACAD11-202ENST00000632629 ZNF395Q9H8N7 513 aaPredicted RBP7.18□□□□□ -1.26
NPHP3-ACAD11-202ENST00000632629 MBIPQ9NS73 344 aa7.18□□□□□ -1.26
NPHP3-ACAD11-202ENST00000632629 IGF1RP08069 1367 aa7.18□□□□□ -1.26
NPHP3-ACAD11-202ENST00000632629 FURINP09958 794 aa7.17□□□□□ -1.26
NPHP3-ACAD11-202ENST00000632629 PRPF38BQ5VTL8 546 aaKnown RBP7.17□□□□□ -1.26
NPHP3-ACAD11-202ENST00000632629 KRTAP1-3Q8IUG1 177 aa7.17□□□□□ -1.26
NPHP3-ACAD11-202ENST00000632629 TSC1Q92574 1164 aa7.17□□□□□ -1.26
NPHP3-ACAD11-202ENST00000632629 TRIM66O15016 1216 aa7.16□□□□□ -1.26
NPHP3-ACAD11-202ENST00000632629 DHX9Q08211 1270 aaKnown RBP7.16□□□□□ -1.26
NPHP3-ACAD11-202ENST00000632629 GIGYF2Q6Y7W6 1299 aaKnown RBP7.16□□□□□ -1.26
NPHP3-ACAD11-202ENST00000632629 KCTD15Q96SI1 283 aaPredicted RBP7.16□□□□□ -1.26
NPHP3-ACAD11-202ENST00000632629 KRBA1A5PL33 1030 aa7.15□□□□□ -1.26
NPHP3-ACAD11-202ENST00000632629 ACDQ96AP0 544 aa7.15□□□□□ -1.26
NPHP3-ACAD11-202ENST00000632629 GPR25O00155 361 aa7.14□□□□□ -1.27
NPHP3-ACAD11-202ENST00000632629 FOXD4L5Q5VV16 416 aaPredicted RBP7.14□□□□□ -1.27
NPHP3-ACAD11-202ENST00000632629 RIC3Q7Z5B4 369 aa7.14□□□□□ -1.27
NPHP3-ACAD11-202ENST00000632629 ZNF837Q96EG3 531 aaPredicted RBP7.14□□□□□ -1.27
NPHP3-ACAD11-202ENST00000632629 CSPP1Q1MSJ5 1256 aa7.13□□□□□ -1.27
NPHP3-ACAD11-202ENST00000632629 LYSMD3Q7Z3D4 306 aa7.13□□□□□ -1.27
NPHP3-ACAD11-202ENST00000632629 PARP9Q8IXQ6 854 aa7.13□□□□□ -1.27
NPHP3-ACAD11-202ENST00000632629 GPKOWQ92917 476 aaPredicted RBP eCLIP7.13□□□□□ -1.27
NPHP3-ACAD11-202ENST00000632629 FOXR1Q6PIV2 292 aa7.12□□□□□ -1.27
NPHP3-ACAD11-202ENST00000632629 GMCL1Q96IK5 515 aa7.12□□□□□ -1.27
NPHP3-ACAD11-202ENST00000632629 LRRC4BQ9NT99 713 aa7.12□□□□□ -1.27
NPHP3-ACAD11-202ENST00000632629 PDE4DQ08499 809 aa7.11□□□□□ -1.27
NPHP3-ACAD11-202ENST00000632629 INTS6LQ5JSJ4 861 aaKnown RBP7.11□□□□□ -1.27
NPHP3-ACAD11-202ENST00000632629 TRIM22Q8IYM9 498 aa7.11□□□□□ -1.27
NPHP3-ACAD11-202ENST00000632629 SLC10A4Q96EP9 437 aa7.11□□□□□ -1.27
NPHP3-ACAD11-202ENST00000632629 CDV3Q9UKY7 258 aaKnown RBP7.11□□□□□ -1.27
NPHP3-ACAD11-202ENST00000632629 NUTM2BA6NNL0 878 aaPredicted RBP7.1□□□□□ -1.27
NPHP3-ACAD11-202ENST00000632629 NUTM2EB1AL46 878 aaPredicted RBP7.1□□□□□ -1.27
NPHP3-ACAD11-202ENST00000632629 SNRPNP63162 240 aaKnown RBP7.1□□□□□ -1.27
NPHP3-ACAD11-202ENST00000632629 DBN1Q16643 649 aa7.1□□□□□ -1.27
NPHP3-ACAD11-202ENST00000632629 QPCTQ16769 361 aa7.1□□□□□ -1.27
NPHP3-ACAD11-202ENST00000632629 TUSC1Q2TAM9 212 aa7.1□□□□□ -1.27
NPHP3-ACAD11-202ENST00000632629 NUTM2DQ5VT03 806 aaPredicted RBP7.1□□□□□ -1.27
NPHP3-ACAD11-202ENST00000632629 NUTM2AQ8IVF1 878 aaPredicted RBP7.1□□□□□ -1.27
NPHP3-ACAD11-202ENST00000632629 OIP5O43482 229 aa7.09□□□□□ -1.27
NPHP3-ACAD11-202ENST00000632629 ADH1AP07327 375 aa7.09□□□□□ -1.27
NPHP3-ACAD11-202ENST00000632629 PRICKLE2Q7Z3G6 844 aa7.09□□□□□ -1.27
NPHP3-ACAD11-202ENST00000632629 ARHGAP9Q9BRR9 750 aa7.09□□□□□ -1.27
NPHP3-ACAD11-202ENST00000632629 SLC24A3Q9HC58 644 aa7.09□□□□□ -1.27
NPHP3-ACAD11-202ENST00000632629 TMPRSS4Q9NRS4 437 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms