RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 ERICH6BQ5W0A0 696 aa6.29□□□□□ -1.4
SDCBP-213ENST00000630925 PCGF5Q86SE9 256 aa6.29□□□□□ -1.4
SDCBP-213ENST00000630925 PMFBP1Q8TBY8 1022 aa6.29□□□□□ -1.4
SDCBP-213ENST00000630925 STK32AQ8WU08 396 aa6.29□□□□□ -1.4
SDCBP-213ENST00000630925 SLAIN2Q9P270 581 aa6.29□□□□□ -1.4
SDCBP-213ENST00000630925 PRC1O43663 620 aa6.29□□□□□ -1.4
SDCBP-213ENST00000630925 CLCN1P35523 988 aa6.29□□□□□ -1.4
SDCBP-213ENST00000630925 COPB2P35606 906 aa6.29□□□□□ -1.4
SDCBP-213ENST00000630925 ELOAQ14241 798 aaKnown RBP6.29□□□□□ -1.4
SDCBP-213ENST00000630925 FILIP1Q7Z7B0 1213 aa6.29□□□□□ -1.4
SDCBP-213ENST00000630925 ALG2Q9H553 416 aa6.29□□□□□ -1.4
SDCBP-213ENST00000630925 PRM3Q9NNZ6 103 aa6.29□□□□□ -1.4
SDCBP-213ENST00000630925 GPCPD1Q9NPB8 672 aa6.29□□□□□ -1.4
SDCBP-213ENST00000630925 NLRP2Q9NX02 1062 aa6.29□□□□□ -1.4
SDCBP-213ENST00000630925 MAP3K20Q9NYL2 800 aaKnown RBP6.29□□□□□ -1.4
SDCBP-213ENST00000630925 MAFBQ9Y5Q3 323 aaPredicted RBP6.29□□□□□ -1.4
SDCBP-213ENST00000630925 MRPL42Q9Y6G3 142 aaKnown RBP6.29□□□□□ -1.4
SDCBP-213ENST00000630925 STK10O94804 968 aaKnown RBP6.28□□□□□ -1.4
SDCBP-213ENST00000630925 IL17RAQ96F46 866 aa6.28□□□□□ -1.4
SDCBP-213ENST00000630925 GMLQ99445 158 aa6.28□□□□□ -1.4
SDCBP-213ENST00000630925 CHMP4BQ9H444 224 aaKnown RBP6.28□□□□□ -1.4
SDCBP-213ENST00000630925 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.28□□□□□ -1.4
SDCBP-213ENST00000630925 RPGRIP1LQ68CZ1 1315 aa6.28□□□□□ -1.4
SDCBP-213ENST00000630925 SMARCA4P51532 1647 aa6.28□□□□□ -1.4
SDCBP-213ENST00000630925 FCHSD2O94868 740 aa6.27□□□□□ -1.41
SDCBP-213ENST00000630925 NT5DC4Q86YG4 428 aa6.27□□□□□ -1.41
SDCBP-213ENST00000630925 SLC39A13Q96H72 371 aa6.27□□□□□ -1.41
SDCBP-213ENST00000630925 ZNF512BQ96KM6 892 aaPredicted RBP6.27□□□□□ -1.41
SDCBP-213ENST00000630925 SCUBE2Q9NQ36 999 aa6.27□□□□□ -1.41
SDCBP-213ENST00000630925 EMILIN3Q9NT22 766 aa6.27□□□□□ -1.41
SDCBP-213ENST00000630925 GPR37L1O60883 481 aa6.27□□□□□ -1.41
SDCBP-213ENST00000630925 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.27□□□□□ -1.41
SDCBP-213ENST00000630925 HELBQ8NG08 1087 aaPredicted RBP6.27□□□□□ -1.41
SDCBP-213ENST00000630925 ZNF622Q969S3 477 aaKnown RBP eCLIP6.27□□□□□ -1.41
SDCBP-213ENST00000630925 EPAS1Q99814 870 aa6.27□□□□□ -1.41
SDCBP-213ENST00000630925 BIN2Q9UBW5 565 aaPredicted RBP6.27□□□□□ -1.41
SDCBP-213ENST00000630925 TTC36A6NLP5 189 aa6.26□□□□□ -1.41
SDCBP-213ENST00000630925 VIL1P09327 827 aaKnown RBP6.26□□□□□ -1.41
SDCBP-213ENST00000630925 NLRP6P59044 892 aa6.26□□□□□ -1.41
SDCBP-213ENST00000630925 LMOD3Q0VAK6 560 aa6.26□□□□□ -1.41
SDCBP-213ENST00000630925 UBE4AQ14139 1066 aa6.26□□□□□ -1.41
SDCBP-213ENST00000630925 GLIPR1L2Q4G1C9 344 aa6.26□□□□□ -1.41
SDCBP-213ENST00000630925 CCDC184Q52MB2 194 aa6.26□□□□□ -1.41
SDCBP-213ENST00000630925 JDP2Q8WYK2 163 aa6.26□□□□□ -1.41
SDCBP-213ENST00000630925 INO80BQ9C086 356 aaPredicted RBP6.26□□□□□ -1.41
SDCBP-213ENST00000630925 TMX4Q9H1E5 349 aaPredicted RBP6.26□□□□□ -1.41
SDCBP-213ENST00000630925 CREBZFQ9NS37 354 aa6.26□□□□□ -1.41
SDCBP-213ENST00000630925 ZNF608Q9ULD9 1512 aaPredicted RBP6.26□□□□□ -1.41
SDCBP-213ENST00000630925 CLGNO14967 610 aa6.26□□□□□ -1.41
SDCBP-213ENST00000630925 MDM2Q00987 491 aaPredicted RBP6.26□□□□□ -1.41
SDCBP-213ENST00000630925 MAP9Q49MG5 647 aa6.26□□□□□ -1.41
SDCBP-213ENST00000630925 ZKSCAN2Q63HK3 967 aa6.26□□□□□ -1.41
SDCBP-213ENST00000630925 FAM163AQ96GL9 167 aaPredicted RBP6.26□□□□□ -1.41
SDCBP-213ENST00000630925 TSPAN18Q96SJ8 248 aa6.26□□□□□ -1.41
SDCBP-213ENST00000630925 OSBPL2Q9H1P3 480 aa6.26□□□□□ -1.41
SDCBP-213ENST00000630925 METRNQ9UJH8 293 aa6.26□□□□□ -1.41
SDCBP-213ENST00000630925 TPX2Q9ULW0 747 aaKnown RBP6.26□□□□□ -1.41
SDCBP-213ENST00000630925 BAZ1BQ9UIG0 1483 aaKnown RBP6.25□□□□□ -1.41
SDCBP-213ENST00000630925 CHD1O14646 1710 aa6.25□□□□□ -1.41
SDCBP-213ENST00000630925 GIGYF1O75420 1035 aaPredicted RBP6.25□□□□□ -1.41
SDCBP-213ENST00000630925 ZRANB2O95218 330 aaKnown RBP eCLIP6.25□□□□□ -1.41
SDCBP-213ENST00000630925 DHX8Q14562 1220 aaKnown RBP6.25□□□□□ -1.41
SDCBP-213ENST00000630925 CSPP1Q1MSJ5 1256 aa6.25□□□□□ -1.41
SDCBP-213ENST00000630925 PPP1R18Q6NYC8 613 aa6.25□□□□□ -1.41
SDCBP-213ENST00000630925 GET4Q7L5D6 327 aaPredicted RBP6.25□□□□□ -1.41
SDCBP-213ENST00000630925 NBPF11Q86T75 865 aa6.25□□□□□ -1.41
SDCBP-213ENST00000630925 C8orf48Q96LL4 319 aa6.25□□□□□ -1.41
SDCBP-213ENST00000630925 CAPN10Q9HC96 672 aa6.25□□□□□ -1.41
SDCBP-213ENST00000630925 GEMIN8Q9NWZ8 242 aaKnown RBP6.25□□□□□ -1.41
SDCBP-213ENST00000630925 PHF8Q9UPP1 1060 aa6.25□□□□□ -1.41
SDCBP-213ENST00000630925 CEP164Q9UPV0 1460 aa6.25□□□□□ -1.41
SDCBP-213ENST00000630925 DISP3Q9P2K9 1392 aa6.24□□□□□ -1.41
SDCBP-213ENST00000630925 ERBB3P21860 1342 aa6.24□□□□□ -1.41
SDCBP-213ENST00000630925 RGS20O76081 388 aa6.24□□□□□ -1.41
SDCBP-213ENST00000630925 POU5F1Q01860 360 aaKnown RBP6.24□□□□□ -1.41
SDCBP-213ENST00000630925 WASHC4Q2M389 1173 aa6.24□□□□□ -1.41
SDCBP-213ENST00000630925 ICE2Q659A1 982 aa6.24□□□□□ -1.41
SDCBP-213ENST00000630925 CASC1Q6TDU7 716 aa6.24□□□□□ -1.41
SDCBP-213ENST00000630925 PHOX2BQ99453 314 aa6.24□□□□□ -1.41
SDCBP-213ENST00000630925 ANP32EQ9BTT0 268 aa6.24□□□□□ -1.41
SDCBP-213ENST00000630925 TGIF2Q9GZN2 237 aa6.24□□□□□ -1.41
SDCBP-213ENST00000630925 LIMD1Q9UGP4 676 aa6.24□□□□□ -1.41
SDCBP-213ENST00000630925 SFMBT1Q9UHJ3 866 aa6.24□□□□□ -1.41
SDCBP-213ENST00000630925 TTF2Q9UNY4 1162 aaKnown RBP6.24□□□□□ -1.41
SDCBP-213ENST00000630925 NUB1Q9Y5A7 615 aa6.24□□□□□ -1.41
SDCBP-213ENST00000630925 SCINQ9Y6U3 715 aa6.24□□□□□ -1.41
SDCBP-213ENST00000630925 PDGFRBP09619 1106 aa6.24□□□□□ -1.41
SDCBP-213ENST00000630925 MNX1P50219 401 aaPredicted RBP6.24□□□□□ -1.41
SDCBP-213ENST00000630925 AMPD3Q01432 767 aa6.24□□□□□ -1.41
SDCBP-213ENST00000630925 ASTLQ6HA08 431 aaPredicted RBP6.24□□□□□ -1.41
SDCBP-213ENST00000630925 GJD4Q96KN9 370 aaPredicted RBP6.24□□□□□ -1.41
SDCBP-213ENST00000630925 CEP63Q96MT8 703 aa6.24□□□□□ -1.41
SDCBP-213ENST00000630925 DNAJC6O75061 913 aa6.23□□□□□ -1.41
SDCBP-213ENST00000630925 CD53P19397 219 aa6.23□□□□□ -1.41
SDCBP-213ENST00000630925 OSBPP22059 807 aa6.23□□□□□ -1.41
SDCBP-213ENST00000630925 POLD1P28340 1107 aa6.23□□□□□ -1.41
SDCBP-213ENST00000630925 VAC14Q08AM6 782 aa6.23□□□□□ -1.41
SDCBP-213ENST00000630925 NBPF1Q3BBV0 1214 aa6.23□□□□□ -1.41
SDCBP-213ENST00000630925 KANK4Q5T7N3 995 aaPredicted RBP6.23□□□□□ -1.41
SDCBP-213ENST00000630925 FAM217BQ9NTX9 383 aaPredicted RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms