RNA–Protein interactions for RNA: ENST00000623185.3

LINC00963-216, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 786 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-216ENST00000623185 FLT4P35916 1363 aa16.81■□□□□ 0.28
LINC00963-216ENST00000623185 MYBBP1AQ9BQG0 1328 aaKnown RBP16.81■□□□□ 0.28
LINC00963-216ENST00000623185 HSP90AB2PQ58FF8 381 aa16.81■□□□□ 0.28
LINC00963-216ENST00000623185 USP21Q9UK80 565 aa16.81■□□□□ 0.28
LINC00963-216ENST00000623185 PHRF1Q9P1Y6 1649 aaKnown RBP16.81■□□□□ 0.28
LINC00963-216ENST00000623185 SLIT2O94813 1529 aa16.8■□□□□ 0.28
LINC00963-216ENST00000623185 BLMP54132 1417 aaPredicted RBP16.79■□□□□ 0.28
LINC00963-216ENST00000623185 ANKRD26Q9UPS8 1709 aa16.79■□□□□ 0.28
LINC00963-216ENST00000623185 AFF2P51816 1311 aa16.79■□□□□ 0.28
LINC00963-216ENST00000623185 ZNF772Q68DY9 489 aaPredicted RBP16.79■□□□□ 0.28
LINC00963-216ENST00000623185 CFAP53Q96M91 514 aa16.79■□□□□ 0.28
LINC00963-216ENST00000623185 ANKRD24Q8TF21 1146 aa16.78■□□□□ 0.28
LINC00963-216ENST00000623185 SMG6Q86US8 1419 aaKnown RBP16.78■□□□□ 0.28
LINC00963-216ENST00000623185 ABCC6O95255 1503 aa16.77■□□□□ 0.28
LINC00963-216ENST00000623185 BCL9LQ86UU0 1499 aa16.77■□□□□ 0.28
LINC00963-216ENST00000623185 CAMTA1Q9Y6Y1 1673 aa16.77■□□□□ 0.28
LINC00963-216ENST00000623185 ABCA3Q99758 1704 aa16.76■□□□□ 0.27
LINC00963-216ENST00000623185 ERBB3P21860 1342 aa16.76■□□□□ 0.27
LINC00963-216ENST00000623185 VPS72Q15906 364 aa16.76■□□□□ 0.27
LINC00963-216ENST00000623185 QTRT2Q9H974 415 aaKnown RBP16.76■□□□□ 0.27
LINC00963-216ENST00000623185 STRN4Q9NRL3 753 aa16.76■□□□□ 0.27
LINC00963-216ENST00000623185 TRPC5Q9UL62 973 aaPredicted RBP16.76■□□□□ 0.27
LINC00963-216ENST00000623185 WDR17Q8IZU2 1322 aa16.75■□□□□ 0.27
LINC00963-216ENST00000623185 COL14A1Q05707 1796 aaKnown RBP16.75■□□□□ 0.27
LINC00963-216ENST00000623185 DIAPH1O60610 1272 aaKnown RBP16.75■□□□□ 0.27
LINC00963-216ENST00000623185 CSB-PGBD3P0DP91 1061 aa16.75■□□□□ 0.27
LINC00963-216ENST00000623185 IL13P35225 146 aa16.75■□□□□ 0.27
LINC00963-216ENST00000623185 EIF4A2Q14240 407 aaKnown RBP16.75■□□□□ 0.27
LINC00963-216ENST00000623185 COL18A1P39060 1754 aa16.74■□□□□ 0.27
LINC00963-216ENST00000623185 LARP1Q6PKG0 1096 aaKnown RBP16.74■□□□□ 0.27
LINC00963-216ENST00000623185 LTV1Q96GA3 475 aaPredicted RBP16.74■□□□□ 0.27
LINC00963-216ENST00000623185 CARD10Q9BWT7 1032 aa16.74■□□□□ 0.27
LINC00963-216ENST00000623185 RGS17Q9UGC6 210 aaPredicted RBP16.74■□□□□ 0.27
LINC00963-216ENST00000623185 MAP2P11137 1827 aaKnown RBP16.74■□□□□ 0.27
LINC00963-216ENST00000623185 TOM1L2Q6ZVM7 507 aa16.73■□□□□ 0.27
LINC00963-216ENST00000623185 NUDCQ9Y266 331 aa16.73■□□□□ 0.27
LINC00963-216ENST00000623185 COL5A2P05997 1499 aaPredicted RBP16.73■□□□□ 0.27
LINC00963-216ENST00000623185 CDK12Q9NYV4 1490 aaPredicted RBP16.73■□□□□ 0.27
LINC00963-216ENST00000623185 NBPF6Q5VWK0 638 aa16.72■□□□□ 0.27
LINC00963-216ENST00000623185 GJD4Q96KN9 370 aaPredicted RBP16.72■□□□□ 0.27
LINC00963-216ENST00000623185 NBPF4Q96M43 638 aa16.72■□□□□ 0.27
LINC00963-216ENST00000623185 PHF23Q9BUL5 403 aaPredicted RBP16.72■□□□□ 0.27
LINC00963-216ENST00000623185 NLRP2Q9NX02 1062 aa16.72■□□□□ 0.27
LINC00963-216ENST00000623185 THRAP3Q9Y2W1 955 aaKnown RBP16.72■□□□□ 0.27
LINC00963-216ENST00000623185 LMO7Q8WWI1 1683 aa16.72■□□□□ 0.27
LINC00963-216ENST00000623185 SPATA31A5Q5VU36 1347 aa16.71■□□□□ 0.27
LINC00963-216ENST00000623185 SPATA31A7Q8IWB4 1347 aa16.71■□□□□ 0.27
LINC00963-216ENST00000623185 EYA1Q99502 592 aa16.71■□□□□ 0.27
LINC00963-216ENST00000623185 SPATA31A1Q5TZJ5 1347 aa16.7■□□□□ 0.26
LINC00963-216ENST00000623185 ONECUT3O60422 494 aaPredicted RBP16.7■□□□□ 0.26
LINC00963-216ENST00000623185 CRB1P82279 1406 aa16.7■□□□□ 0.26
LINC00963-216ENST00000623185 CCER2I3L3R5 266 aa16.69■□□□□ 0.26
LINC00963-216ENST00000623185 BARGINQ6ZT62 677 aa16.69■□□□□ 0.26
LINC00963-216ENST00000623185 TCP11L2Q8N4U5 519 aa16.69■□□□□ 0.26
LINC00963-216ENST00000623185 CCDC9Q9Y3X0 531 aaKnown RBP16.69■□□□□ 0.26
LINC00963-216ENST00000623185 LTN1O94822 1766 aa16.69■□□□□ 0.26
LINC00963-216ENST00000623185 PEAK1Q9H792 1746 aa16.68■□□□□ 0.26
LINC00963-216ENST00000623185 NWD2Q9ULI1 1742 aa16.68■□□□□ 0.26
LINC00963-216ENST00000623185 RBM6P78332 1123 aaKnown RBP16.68■□□□□ 0.26
LINC00963-216ENST00000623185 MIER1Q8N108 512 aa16.68■□□□□ 0.26
LINC00963-216ENST00000623185 ATRNO75882 1429 aa16.68■□□□□ 0.26
LINC00963-216ENST00000623185 RXRBP28702 533 aa16.67■□□□□ 0.26
LINC00963-216ENST00000623185 CDCA7Q9BWT1 371 aaPredicted RBP16.67■□□□□ 0.26
LINC00963-216ENST00000623185 IGSF1Q8N6C5 1336 aa16.67■□□□□ 0.26
LINC00963-216ENST00000623185 POTEAQ6S8J7 498 aa16.66■□□□□ 0.26
LINC00963-216ENST00000623185 USP35Q9P2H5 1018 aa16.66■□□□□ 0.26
LINC00963-216ENST00000623185 U2SURPO15042 1029 aaKnown RBP16.65■□□□□ 0.26
LINC00963-216ENST00000623185 FCHSD2O94868 740 aa16.65■□□□□ 0.26
LINC00963-216ENST00000623185 CCDC184Q52MB2 194 aa16.65■□□□□ 0.26
LINC00963-216ENST00000623185 U2AF1L5P0DN76 240 aaPredicted RBP16.64■□□□□ 0.25
LINC00963-216ENST00000623185 U2AF1Q01081 240 aaKnown RBP eCLIP16.64■□□□□ 0.25
LINC00963-216ENST00000623185 SULT6B1Q6IMI4 303 aa16.64■□□□□ 0.25
LINC00963-216ENST00000623185 PNISRQ8TF01 805 aaKnown RBP16.64■□□□□ 0.25
LINC00963-216ENST00000623185 PNNQ9H307 717 aaKnown RBP16.64■□□□□ 0.25
LINC00963-216ENST00000623185 MRS2Q9HD23 443 aa16.64■□□□□ 0.25
LINC00963-216ENST00000623185 COL3A1P02461 1466 aaPredicted RBP16.64■□□□□ 0.25
LINC00963-216ENST00000623185 PLCH1Q4KWH8 1693 aa16.63■□□□□ 0.25
LINC00963-216ENST00000623185 IL2RBP14784 551 aa16.63■□□□□ 0.25
LINC00963-216ENST00000623185 RAPGEF4Q8WZA2 1011 aa16.63■□□□□ 0.25
LINC00963-216ENST00000623185 RGPD5Q99666 1765 aa16.62■□□□□ 0.25
LINC00963-216ENST00000623185 USHBP1Q8N6Y0 703 aa16.62■□□□□ 0.25
LINC00963-216ENST00000623185 KDRP35968 1356 aa16.62■□□□□ 0.25
LINC00963-216ENST00000623185 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.62■□□□□ 0.25
LINC00963-216ENST00000623185 NCAPD2Q15021 1401 aa16.62■□□□□ 0.25
LINC00963-216ENST00000623185 TATP17735 454 aaPredicted RBP16.61■□□□□ 0.25
LINC00963-216ENST00000623185 WDR43Q15061 677 aaKnown RBP eCLIP16.61■□□□□ 0.25
LINC00963-216ENST00000623185 FAM98CQ17RN3 349 aaKnown RBP16.61■□□□□ 0.25
LINC00963-216ENST00000623185 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.61■□□□□ 0.25
LINC00963-216ENST00000623185 NRAPQ86VF7 1730 aa16.61■□□□□ 0.25
LINC00963-216ENST00000623185 EXOC5O00471 708 aa16.6■□□□□ 0.25
LINC00963-216ENST00000623185 HMOX1P09601 288 aa16.6■□□□□ 0.25
LINC00963-216ENST00000623185 ADAMTS8Q9UP79 889 aa16.6■□□□□ 0.25
LINC00963-216ENST00000623185 AEBP1Q8IUX7 1158 aa16.59■□□□□ 0.25
LINC00963-216ENST00000623185 PLEKHG2Q9H7P9 1386 aa16.59■□□□□ 0.25
LINC00963-216ENST00000623185 AMOTQ4VCS5 1084 aa16.58■□□□□ 0.24
LINC00963-216ENST00000623185 SEPT12Q8IYM1 358 aa16.58■□□□□ 0.24
LINC00963-216ENST00000623185 RSPH6AQ9H0K4 717 aa16.58■□□□□ 0.24
LINC00963-216ENST00000623185 PLEKHO1Q53GL0 409 aaPredicted RBP16.57■□□□□ 0.24
LINC00963-216ENST00000623185 ZCRB1Q8TBF4 217 aaKnown RBP16.57■□□□□ 0.24
LINC00963-216ENST00000623185 PLEKHF1Q96S99 279 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms