RNA–Protein interactions for RNA: ENST00000617799.1

SBDS-205, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SBDS, Length 953 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-205ENST00000617799 COL5A2P05997 1499 aaPredicted RBP23.45■■□□□ 1.34
SBDS-205ENST00000617799 FBLN1P23142 703 aa23.45■■□□□ 1.34
SBDS-205ENST00000617799 TNNT2P45379 298 aaPredicted RBP23.45■■□□□ 1.34
SBDS-205ENST00000617799 RBM6P78332 1123 aaKnown RBP23.45■■□□□ 1.34
SBDS-205ENST00000617799 VPS72Q15906 364 aa23.45■■□□□ 1.34
SBDS-205ENST00000617799 RGPD5Q99666 1765 aa23.45■■□□□ 1.34
SBDS-205ENST00000617799 AMPHP49418 695 aa23.44■■□□□ 1.34
SBDS-205ENST00000617799 CNGB1Q14028 1251 aaPredicted RBP23.44■■□□□ 1.34
SBDS-205ENST00000617799 RRS1Q15050 365 aaKnown RBP23.44■■□□□ 1.34
SBDS-205ENST00000617799 MAP3K19Q56UN5 1328 aa23.43■■□□□ 1.34
SBDS-205ENST00000617799 MORC1Q86VD1 984 aa23.43■■□□□ 1.34
SBDS-205ENST00000617799 GJD4Q96KN9 370 aaPredicted RBP23.43■■□□□ 1.34
SBDS-205ENST00000617799 CSB-PGBD3P0DP91 1061 aa23.42■■□□□ 1.34
SBDS-205ENST00000617799 CC2D1BQ5T0F9 858 aaKnown RBP23.42■■□□□ 1.34
SBDS-205ENST00000617799 AXIN2Q9Y2T1 843 aa23.42■■□□□ 1.34
SBDS-205ENST00000617799 SOCS7O14512 581 aa23.41■■□□□ 1.34
SBDS-205ENST00000617799 PER1O15534 1290 aaPredicted RBP23.41■■□□□ 1.34
SBDS-205ENST00000617799 AMER1Q5JTC6 1135 aaPredicted RBP23.41■■□□□ 1.34
SBDS-205ENST00000617799 GLI3P10071 1580 aa23.4■■□□□ 1.34
SBDS-205ENST00000617799 LARP1Q6PKG0 1096 aaKnown RBP23.4■■□□□ 1.34
SBDS-205ENST00000617799 PPM1GO15355 546 aaPredicted RBP23.39■■□□□ 1.33
SBDS-205ENST00000617799 USP35Q9P2H5 1018 aa23.39■■□□□ 1.33
SBDS-205ENST00000617799 BLMP54132 1417 aaPredicted RBP23.39■■□□□ 1.33
SBDS-205ENST00000617799 RTL1A6NKG5 1358 aa23.39■■□□□ 1.33
SBDS-205ENST00000617799 SPATA31A5Q5VU36 1347 aa23.38■■□□□ 1.33
SBDS-205ENST00000617799 SPATA31A7Q8IWB4 1347 aa23.38■■□□□ 1.33
SBDS-205ENST00000617799 A0A0G2JS52 829 aa23.38■■□□□ 1.33
SBDS-205ENST00000617799 MYT1Q01538 1121 aa23.38■■□□□ 1.33
SBDS-205ENST00000617799 TOM1L2Q6ZVM7 507 aa23.38■■□□□ 1.33
SBDS-205ENST00000617799 IP6K1Q92551 441 aa23.38■■□□□ 1.33
SBDS-205ENST00000617799 HOXC9P31274 260 aa23.37■■□□□ 1.33
SBDS-205ENST00000617799 DDX10Q13206 875 aaKnown RBP23.37■■□□□ 1.33
SBDS-205ENST00000617799 LTV1Q96GA3 475 aaPredicted RBP23.37■■□□□ 1.33
SBDS-205ENST00000617799 CDK12Q9NYV4 1490 aaPredicted RBP23.36■■□□□ 1.33
SBDS-205ENST00000617799 WDR17Q8IZU2 1322 aa23.36■■□□□ 1.33
SBDS-205ENST00000617799 CRB1P82279 1406 aa23.36■■□□□ 1.33
SBDS-205ENST00000617799 ANKRD24Q8TF21 1146 aa23.36■■□□□ 1.33
SBDS-205ENST00000617799 EMILIN1Q9Y6C2 1016 aa23.36■■□□□ 1.33
SBDS-205ENST00000617799 FLT4P35916 1363 aa23.36■■□□□ 1.33
SBDS-205ENST00000617799 PEAK1Q9H792 1746 aa23.36■■□□□ 1.33
SBDS-205ENST00000617799 SPATA31A1Q5TZJ5 1347 aa23.35■■□□□ 1.33
SBDS-205ENST00000617799 RGS12O14924 1447 aa23.35■■□□□ 1.33
SBDS-205ENST00000617799 MAP2P11137 1827 aaKnown RBP23.35■■□□□ 1.33
SBDS-205ENST00000617799 FAM98CQ17RN3 349 aaKnown RBP23.34■■□□□ 1.33
SBDS-205ENST00000617799 NPC1L1Q9UHC9 1359 aa23.34■■□□□ 1.33
SBDS-205ENST00000617799 ERBB3P21860 1342 aa23.33■■□□□ 1.33
SBDS-205ENST00000617799 SMG6Q86US8 1419 aaKnown RBP23.33■■□□□ 1.33
SBDS-205ENST00000617799 KIF24Q5T7B8 1368 aa23.33■■□□□ 1.33
SBDS-205ENST00000617799 NLRP2Q9NX02 1062 aa23.32■■□□□ 1.32
SBDS-205ENST00000617799 FAM208AQ9UK61 1670 aaKnown RBP23.32■■□□□ 1.32
SBDS-205ENST00000617799 TCP11L2Q8N4U5 519 aa23.31■■□□□ 1.32
SBDS-205ENST00000617799 POLKQ9UBT6 870 aa23.31■■□□□ 1.32
SBDS-205ENST00000617799 HSP90AB2PQ58FF8 381 aa23.3■■□□□ 1.32
SBDS-205ENST00000617799 INSRP06213 1382 aa23.29■■□□□ 1.32
SBDS-205ENST00000617799 SEPT12Q8IYM1 358 aa23.28■■□□□ 1.32
SBDS-205ENST00000617799 CARD10Q9BWT7 1032 aa23.27■■□□□ 1.32
SBDS-205ENST00000617799 THRAP3Q9Y2W1 955 aaKnown RBP23.27■■□□□ 1.32
SBDS-205ENST00000617799 THSD7AQ9UPZ6 1657 aa23.25■■□□□ 1.31
SBDS-205ENST00000617799 WNK3Q9BYP7 1800 aa23.25■■□□□ 1.31
SBDS-205ENST00000617799 BARGINQ6ZT62 677 aa23.25■■□□□ 1.31
SBDS-205ENST00000617799 RGPD2P0DJD1 1756 aa23.24■■□□□ 1.31
SBDS-205ENST00000617799 ONECUT3O60422 494 aaPredicted RBP23.23■■□□□ 1.31
SBDS-205ENST00000617799 BRWD3Q6RI45 1802 aa23.23■■□□□ 1.31
SBDS-205ENST00000617799 MTHFSP49914 203 aa23.21■■□□□ 1.31
SBDS-205ENST00000617799 CDCA7Q9BWT1 371 aaPredicted RBP23.2■■□□□ 1.3
SBDS-205ENST00000617799 PARP4Q9UKK3 1724 aaKnown RBP23.19■■□□□ 1.3
SBDS-205ENST00000617799 KRT27Q7Z3Y8 459 aa23.19■■□□□ 1.3
SBDS-205ENST00000617799 USHBP1Q8N6Y0 703 aa23.19■■□□□ 1.3
SBDS-205ENST00000617799 EIF4A2Q14240 407 aaKnown RBP23.18■■□□□ 1.3
SBDS-205ENST00000617799 NBPF6Q5VWK0 638 aa23.18■■□□□ 1.3
SBDS-205ENST00000617799 NBPF4Q96M43 638 aa23.18■■□□□ 1.3
SBDS-205ENST00000617799 LRRC37A3O60309 1634 aa23.18■■□□□ 1.3
SBDS-205ENST00000617799 IL2RBP14784 551 aa23.17■■□□□ 1.3
SBDS-205ENST00000617799 PDE3BQ13370 1112 aa23.16■■□□□ 1.3
SBDS-205ENST00000617799 DDB1Q16531 1140 aa23.16■■□□□ 1.3
SBDS-205ENST00000617799 DISP2A7MBM2 1401 aa23.16■■□□□ 1.3
SBDS-205ENST00000617799 PARD3Q8TEW0 1356 aa23.15■■□□□ 1.3
SBDS-205ENST00000617799 PPP2R1AP30153 589 aa23.15■■□□□ 1.3
SBDS-205ENST00000617799 RAPGEF4Q8WZA2 1011 aa23.13■■□□□ 1.29
SBDS-205ENST00000617799 CFAP53Q96M91 514 aa23.13■■□□□ 1.29
SBDS-205ENST00000617799 EYA1Q99502 592 aa23.12■■□□□ 1.29
SBDS-205ENST00000617799 TNS2Q63HR2 1409 aa23.11■■□□□ 1.29
SBDS-205ENST00000617799 EXOC5O00471 708 aa23.11■■□□□ 1.29
SBDS-205ENST00000617799 RALBP1Q15311 655 aa23.11■■□□□ 1.29
SBDS-205ENST00000617799 FAM182BQ5T319 152 aa23.11■■□□□ 1.29
SBDS-205ENST00000617799 MEGF6O75095 1541 aa23.1■■□□□ 1.29
SBDS-205ENST00000617799 DIAPH1O60610 1272 aaKnown RBP23.1■■□□□ 1.29
SBDS-205ENST00000617799 TATP17735 454 aaPredicted RBP23.09■■□□□ 1.29
SBDS-205ENST00000617799 IL13P35225 146 aa23.08■■□□□ 1.29
SBDS-205ENST00000617799 IGSF1Q8N6C5 1336 aa23.08■■□□□ 1.28
SBDS-205ENST00000617799 COL3A1P02461 1466 aaPredicted RBP23.07■■□□□ 1.28
SBDS-205ENST00000617799 OVOS2A0A0G2JMS6 1433 aa23.07■■□□□ 1.28
SBDS-205ENST00000617799 NCAPD2Q15021 1401 aa23.07■■□□□ 1.28
SBDS-205ENST00000617799 RGPD1P0DJD0 1748 aa23.06■■□□□ 1.28
SBDS-205ENST00000617799 U2SURPO15042 1029 aaKnown RBP23.05■■□□□ 1.28
SBDS-205ENST00000617799 FAM196AQ6ZSG2 479 aa23.04■■□□□ 1.28
SBDS-205ENST00000617799 ZCRB1Q8TBF4 217 aaKnown RBP23.04■■□□□ 1.28
SBDS-205ENST00000617799 MYBBP1AQ9BQG0 1328 aaKnown RBP23.04■■□□□ 1.28
SBDS-205ENST00000617799 SULT6B1Q6IMI4 303 aa23.03■■□□□ 1.28
SBDS-205ENST00000617799 MARCH10Q8NA82 808 aaPredicted RBP23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms