RNA–Protein interactions for RNA: ENST00000617719.4

ATXN3-251, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-251ENST00000617719 CARD14Q9BXL6 1004 aa8.22□□□□□ -1.09
ATXN3-251ENST00000617719 LORP23490 312 aaPredicted RBP8.21□□□□□ -1.1
ATXN3-251ENST00000617719 VASH1Q7L8A9 365 aaPredicted RBP8.21□□□□□ -1.1
ATXN3-251ENST00000617719 LRRN4Q8WUT4 740 aa8.21□□□□□ -1.1
ATXN3-251ENST00000617719 GPBP1L1Q9HC44 474 aaPredicted RBP8.21□□□□□ -1.1
ATXN3-251ENST00000617719 TRMT44Q8IYL2 757 aaKnown RBP8.2□□□□□ -1.1
ATXN3-251ENST00000617719 MEIOBQ8N635 442 aa8.2□□□□□ -1.1
ATXN3-251ENST00000617719 NESP48681 1621 aa8.19□□□□□ -1.1
ATXN3-251ENST00000617719 PROCA1Q8NCQ7 364 aaPredicted RBP8.19□□□□□ -1.1
ATXN3-251ENST00000617719 MAP4K5Q9Y4K4 846 aa8.19□□□□□ -1.1
ATXN3-251ENST00000617719 RSF1Q96T23 1441 aaPredicted RBP8.19□□□□□ -1.1
ATXN3-251ENST00000617719 MAN1A2O60476 641 aa8.18□□□□□ -1.1
ATXN3-251ENST00000617719 BMP2P12643 396 aa8.18□□□□□ -1.1
ATXN3-251ENST00000617719 ERFEQ4G0M1 354 aa8.18□□□□□ -1.1
ATXN3-251ENST00000617719 LINC00528Q8N1L1 170 aa8.18□□□□□ -1.1
ATXN3-251ENST00000617719 FAM117AQ9C073 453 aa8.18□□□□□ -1.1
ATXN3-251ENST00000617719 KDM4CQ9H3R0 1056 aa8.18□□□□□ -1.1
ATXN3-251ENST00000617719 CUX2O14529 1486 aa8.18□□□□□ -1.1
ATXN3-251ENST00000617719 SKIV2LQ15477 1246 aaKnown RBP8.17□□□□□ -1.1
ATXN3-251ENST00000617719 LAMC3Q9Y6N6 1575 aa8.17□□□□□ -1.1
ATXN3-251ENST00000617719 WIZO95785 1651 aa8.17□□□□□ -1.1
ATXN3-251ENST00000617719 NR6A1Q15406 480 aa8.16□□□□□ -1.1
ATXN3-251ENST00000617719 CCDC116Q8IYX3 515 aa8.16□□□□□ -1.1
ATXN3-251ENST00000617719 DNMT3LQ9UJW3 386 aa8.16□□□□□ -1.1
ATXN3-251ENST00000617719 CADPSQ9ULU8 1353 aa8.16□□□□□ -1.1
ATXN3-251ENST00000617719 ERCC6Q03468 1493 aa8.15□□□□□ -1.1
ATXN3-251ENST00000617719 SOS2Q07890 1332 aaPredicted RBP8.15□□□□□ -1.1
ATXN3-251ENST00000617719 UPP2O95045 317 aa8.15□□□□□ -1.1
ATXN3-251ENST00000617719 SH3D19Q5HYK7 790 aa8.15□□□□□ -1.1
ATXN3-251ENST00000617719 ZSCAN1Q8NBB4 408 aa8.15□□□□□ -1.1
ATXN3-251ENST00000617719 GPKOWQ92917 476 aaPredicted RBP eCLIP8.15□□□□□ -1.1
ATXN3-251ENST00000617719 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.15□□□□□ -1.1
ATXN3-251ENST00000617719 FKBPLQ9UIM3 349 aa8.15□□□□□ -1.1
ATXN3-251ENST00000617719 CBLBQ13191 982 aa8.14□□□□□ -1.11
ATXN3-251ENST00000617719 PPP1R26Q5T8A7 1209 aaPredicted RBP8.14□□□□□ -1.11
ATXN3-251ENST00000617719 PDXDC2PQ6P474 469 aa8.14□□□□□ -1.11
ATXN3-251ENST00000617719 OCSTAMPQ9BR26 566 aa8.14□□□□□ -1.11
ATXN3-251ENST00000617719 ARHGAP9Q9BRR9 750 aa8.14□□□□□ -1.11
ATXN3-251ENST00000617719 EMILIN1Q9Y6C2 1016 aa8.14□□□□□ -1.11
ATXN3-251ENST00000617719 VSIG8P0DPA2 414 aa8.13□□□□□ -1.11
ATXN3-251ENST00000617719 EPS8L1Q8TE68 723 aa8.13□□□□□ -1.11
ATXN3-251ENST00000617719 ATP1B4Q9UN42 357 aaPredicted RBP8.13□□□□□ -1.11
ATXN3-251ENST00000617719 PDS5BQ9NTI5 1447 aa8.12□□□□□ -1.11
ATXN3-251ENST00000617719 PPFIA3O75145 1194 aa8.12□□□□□ -1.11
ATXN3-251ENST00000617719 AP1G2O75843 785 aa8.12□□□□□ -1.11
ATXN3-251ENST00000617719 PPP2R2DQ66LE6 453 aa8.12□□□□□ -1.11
ATXN3-251ENST00000617719 KCTD15Q96SI1 283 aaPredicted RBP8.12□□□□□ -1.11
ATXN3-251ENST00000617719 TSEN34Q9BSV6 310 aaKnown RBP8.12□□□□□ -1.11
ATXN3-251ENST00000617719 SLC10A4Q96EP9 437 aa8.11□□□□□ -1.11
ATXN3-251ENST00000617719 DDRGK1Q96HY6 314 aa8.11□□□□□ -1.11
ATXN3-251ENST00000617719 HMX1Q9NP08 348 aaPredicted RBP8.11□□□□□ -1.11
ATXN3-251ENST00000617719 ZBTB33Q86T24 672 aa8.1□□□□□ -1.11
ATXN3-251ENST00000617719 CFTRP13569 1480 aa8.09□□□□□ -1.11
ATXN3-251ENST00000617719 FAM181BA6NEQ2 426 aa8.09□□□□□ -1.11
ATXN3-251ENST00000617719 FIGNL2A6NMB9 653 aa8.09□□□□□ -1.11
ATXN3-251ENST00000617719 TTLL8A6PVC2 850 aa8.09□□□□□ -1.11
ATXN3-251ENST00000617719 Q6ZVU0 165 aa8.09□□□□□ -1.11
ATXN3-251ENST00000617719 PGPEP1Q9NXJ5 209 aa8.09□□□□□ -1.11
ATXN3-251ENST00000617719 TOP2AP11388 1531 aaKnown RBP8.08□□□□□ -1.12
ATXN3-251ENST00000617719 INTS6LQ5JSJ4 861 aaKnown RBP8.08□□□□□ -1.12
ATXN3-251ENST00000617719 ADAM32Q8TC27 787 aa8.08□□□□□ -1.12
ATXN3-251ENST00000617719 AGBL1Q96MI9 1066 aa8.08□□□□□ -1.12
ATXN3-251ENST00000617719 THOC2Q8NI27 1593 aaKnown RBP8.08□□□□□ -1.12
ATXN3-251ENST00000617719 ZC3H4Q9UPT8 1303 aaKnown RBP8.07□□□□□ -1.12
ATXN3-251ENST00000617719 USP17L8P0C7I0 530 aa8.07□□□□□ -1.12
ATXN3-251ENST00000617719 PTK2Q05397 1052 aa8.07□□□□□ -1.12
ATXN3-251ENST00000617719 SPINT1O43278 529 aa8.06□□□□□ -1.12
ATXN3-251ENST00000617719 PTSQ03393 145 aa8.06□□□□□ -1.12
ATXN3-251ENST00000617719 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.06□□□□□ -1.12
ATXN3-251ENST00000617719 CDV3Q9UKY7 258 aaKnown RBP8.06□□□□□ -1.12
ATXN3-251ENST00000617719 KIF21AQ7Z4S6 1674 aa8.05□□□□□ -1.12
ATXN3-251ENST00000617719 RAB15P59190 212 aa8.05□□□□□ -1.12
ATXN3-251ENST00000617719 GPR161Q8N6U8 529 aaKnown RBP8.05□□□□□ -1.12
ATXN3-251ENST00000617719 TMPRSS4Q9NRS4 437 aa8.05□□□□□ -1.12
ATXN3-251ENST00000617719 GPSM3Q9Y4H4 160 aa8.05□□□□□ -1.12
ATXN3-251ENST00000617719 RFC5P40937 340 aa8.04□□□□□ -1.12
ATXN3-251ENST00000617719 CTSOP43234 321 aaPredicted RBP8.04□□□□□ -1.12
ATXN3-251ENST00000617719 RELBQ01201 579 aa8.04□□□□□ -1.12
ATXN3-251ENST00000617719 KRT76Q01546 638 aa8.04□□□□□ -1.12
ATXN3-251ENST00000617719 DHX9Q08211 1270 aaKnown RBP8.04□□□□□ -1.12
ATXN3-251ENST00000617719 INSM2Q96T92 566 aaPredicted RBP8.04□□□□□ -1.12
ATXN3-251ENST00000617719 CCDC88BA6NC98 1476 aa8.03□□□□□ -1.12
ATXN3-251ENST00000617719 BCANQ96GW7 911 aa8.03□□□□□ -1.12
ATXN3-251ENST00000617719 FANCD2Q9BXW9 1451 aa8.02□□□□□ -1.13
ATXN3-251ENST00000617719 MRC2Q9UBG0 1479 aa8.02□□□□□ -1.13
ATXN3-251ENST00000617719 ZNF784Q8NCA9 323 aaPredicted RBP8.02□□□□□ -1.13
ATXN3-251ENST00000617719 ZNF395Q9H8N7 513 aaPredicted RBP8.02□□□□□ -1.13
ATXN3-251ENST00000617719 WDR62O43379 1518 aa8.02□□□□□ -1.13
ATXN3-251ENST00000617719 NBPF20Q3BBV1 942 aa8.01□□□□□ -1.13
ATXN3-251ENST00000617719 CCDC155Q8N6L0 562 aa8.01□□□□□ -1.13
ATXN3-251ENST00000617719 TRIM34Q9BYJ4 488 aa8.01□□□□□ -1.13
ATXN3-251ENST00000617719 ERVH48-1M5A8F1 160 aa8□□□□□ -1.13
ATXN3-251ENST00000617719 LILRA1O75019 489 aa8□□□□□ -1.13
ATXN3-251ENST00000617719 ADD1P35611 737 aaKnown RBP8□□□□□ -1.13
ATXN3-251ENST00000617719 KDF1Q8NAX2 398 aaPredicted RBP8□□□□□ -1.13
ATXN3-251ENST00000617719 CNTNAP3BQ96NU0 1288 aa8□□□□□ -1.13
ATXN3-251ENST00000617719 CNTNAP3Q9BZ76 1288 aa8□□□□□ -1.13
ATXN3-251ENST00000617719 CEP164Q9UPV0 1460 aa8□□□□□ -1.13
ATXN3-251ENST00000617719 SLC35F4A4IF30 521 aa7.99□□□□□ -1.13
ATXN3-251ENST00000617719 DZIP3Q86Y13 1208 aaKnown RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms