RNA–Protein interactions for RNA: ENST00000608107.1

ITGB5-211, Transcript of integrin subunit beta 5, humanhuman

TSL 3

Gene ITGB5, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-211ENST00000608107 PRDM11Q9NQV5 511 aa13.87□□□□□ -0.19
ITGB5-211ENST00000608107 LMO7Q8WWI1 1683 aa13.86□□□□□ -0.19
ITGB5-211ENST00000608107 CAMTA1Q9Y6Y1 1673 aa13.86□□□□□ -0.19
ITGB5-211ENST00000608107 HSP90AB2PQ58FF8 381 aa13.86□□□□□ -0.19
ITGB5-211ENST00000608107 IP6K1Q92551 441 aa13.86□□□□□ -0.19
ITGB5-211ENST00000608107 SMG6Q86US8 1419 aaKnown RBP13.86□□□□□ -0.19
ITGB5-211ENST00000608107 COL14A1Q05707 1796 aaKnown RBP13.86□□□□□ -0.19
ITGB5-211ENST00000608107 PLCH1Q4KWH8 1693 aa13.85□□□□□ -0.19
ITGB5-211ENST00000608107 LTV1Q96GA3 475 aaPredicted RBP13.84□□□□□ -0.19
ITGB5-211ENST00000608107 COL3A1P02461 1466 aaPredicted RBP13.84□□□□□ -0.19
ITGB5-211ENST00000608107 CDK12Q9NYV4 1490 aaPredicted RBP13.84□□□□□ -0.19
ITGB5-211ENST00000608107 FLT4P35916 1363 aa13.83□□□□□ -0.19
ITGB5-211ENST00000608107 C8orf37Q96NL8 207 aa13.83□□□□□ -0.2
ITGB5-211ENST00000608107 RTL1A6NKG5 1358 aa13.83□□□□□ -0.2
ITGB5-211ENST00000608107 NRAPQ86VF7 1730 aa13.82□□□□□ -0.2
ITGB5-211ENST00000608107 MEX3CQ5U5Q3 659 aaKnown RBP13.82□□□□□ -0.2
ITGB5-211ENST00000608107 NGLY1Q96IV0 654 aa13.82□□□□□ -0.2
ITGB5-211ENST00000608107 BTG4Q9NY30 223 aa13.82□□□□□ -0.2
ITGB5-211ENST00000608107 INSRP06213 1382 aa13.82□□□□□ -0.2
ITGB5-211ENST00000608107 KIF24Q5T7B8 1368 aa13.82□□□□□ -0.2
ITGB5-211ENST00000608107 EIF4A2Q14240 407 aaKnown RBP13.81□□□□□ -0.2
ITGB5-211ENST00000608107 NWD2Q9ULI1 1742 aa13.81□□□□□ -0.2
ITGB5-211ENST00000608107 SLIT2O94813 1529 aa13.8□□□□□ -0.2
ITGB5-211ENST00000608107 ABCC6O95255 1503 aa13.8□□□□□ -0.2
ITGB5-211ENST00000608107 ANKRD24Q8TF21 1146 aa13.8□□□□□ -0.2
ITGB5-211ENST00000608107 MRS2Q9HD23 443 aa13.8□□□□□ -0.2
ITGB5-211ENST00000608107 STRN4Q9NRL3 753 aa13.8□□□□□ -0.2
ITGB5-211ENST00000608107 BLMP54132 1417 aaPredicted RBP13.8□□□□□ -0.2
ITGB5-211ENST00000608107 COL5A2P05997 1499 aaPredicted RBP13.8□□□□□ -0.2
ITGB5-211ENST00000608107 IL13P35225 146 aa13.79□□□□□ -0.2
ITGB5-211ENST00000608107 CFAP53Q96M91 514 aa13.79□□□□□ -0.2
ITGB5-211ENST00000608107 AFF2P51816 1311 aa13.79□□□□□ -0.2
ITGB5-211ENST00000608107 DIAPH1O60610 1272 aaKnown RBP13.78□□□□□ -0.2
ITGB5-211ENST00000608107 EVA1CP58658 441 aa13.78□□□□□ -0.2
ITGB5-211ENST00000608107 LARP1Q6PKG0 1096 aaKnown RBP13.78□□□□□ -0.2
ITGB5-211ENST00000608107 FNBP4Q8N3X1 1017 aaPredicted RBP13.78□□□□□ -0.2
ITGB5-211ENST00000608107 ERBB3P21860 1342 aa13.78□□□□□ -0.2
ITGB5-211ENST00000608107 BCL9LQ86UU0 1499 aa13.78□□□□□ -0.2
ITGB5-211ENST00000608107 RGPD1P0DJD0 1748 aa13.78□□□□□ -0.2
ITGB5-211ENST00000608107 CCER2I3L3R5 266 aa13.77□□□□□ -0.21
ITGB5-211ENST00000608107 CSB-PGBD3P0DP91 1061 aa13.77□□□□□ -0.21
ITGB5-211ENST00000608107 NBPF6Q5VWK0 638 aa13.77□□□□□ -0.21
ITGB5-211ENST00000608107 USHBP1Q8N6Y0 703 aa13.77□□□□□ -0.21
ITGB5-211ENST00000608107 NBPF4Q96M43 638 aa13.77□□□□□ -0.21
ITGB5-211ENST00000608107 EYA1Q99502 592 aa13.77□□□□□ -0.21
ITGB5-211ENST00000608107 U2SURPO15042 1029 aaKnown RBP13.76□□□□□ -0.21
ITGB5-211ENST00000608107 USP21Q9UK80 565 aa13.76□□□□□ -0.21
ITGB5-211ENST00000608107 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.76□□□□□ -0.21
ITGB5-211ENST00000608107 FAM208AQ9UK61 1670 aaKnown RBP13.75□□□□□ -0.21
ITGB5-211ENST00000608107 WDR17Q8IZU2 1322 aa13.75□□□□□ -0.21
ITGB5-211ENST00000608107 UNC5CLQ8IV45 518 aa13.75□□□□□ -0.21
ITGB5-211ENST00000608107 NLRP2Q9NX02 1062 aa13.75□□□□□ -0.21
ITGB5-211ENST00000608107 HMOX1P09601 288 aa13.74□□□□□ -0.21
ITGB5-211ENST00000608107 TOM1L2Q6ZVM7 507 aa13.74□□□□□ -0.21
ITGB5-211ENST00000608107 AEBP1Q8IUX7 1158 aa13.74□□□□□ -0.21
ITGB5-211ENST00000608107 PNISRQ8TF01 805 aaKnown RBP13.74□□□□□ -0.21
ITGB5-211ENST00000608107 IGSF1Q8N6C5 1336 aa13.73□□□□□ -0.21
ITGB5-211ENST00000608107 U2AF1L5P0DN76 240 aaPredicted RBP13.73□□□□□ -0.21
ITGB5-211ENST00000608107 U2AF1Q01081 240 aaKnown RBP eCLIP13.73□□□□□ -0.21
ITGB5-211ENST00000608107 USP35Q9P2H5 1018 aa13.73□□□□□ -0.21
ITGB5-211ENST00000608107 SULT6B1Q6IMI4 303 aa13.72□□□□□ -0.21
ITGB5-211ENST00000608107 FAM9BQ8IZU0 186 aa13.72□□□□□ -0.21
ITGB5-211ENST00000608107 RGS17Q9UGC6 210 aaPredicted RBP13.72□□□□□ -0.21
ITGB5-211ENST00000608107 ADAMTS8Q9UP79 889 aa13.72□□□□□ -0.21
ITGB5-211ENST00000608107 NUDCQ9Y266 331 aa13.72□□□□□ -0.21
ITGB5-211ENST00000608107 CCDC9Q9Y3X0 531 aaKnown RBP13.72□□□□□ -0.21
ITGB5-211ENST00000608107 CRB1P82279 1406 aa13.72□□□□□ -0.21
ITGB5-211ENST00000608107 CARD10Q9BWT7 1032 aa13.71□□□□□ -0.21
ITGB5-211ENST00000608107 NCAPD2Q15021 1401 aa13.71□□□□□ -0.22
ITGB5-211ENST00000608107 SPATA31A1Q5TZJ5 1347 aa13.7□□□□□ -0.22
ITGB5-211ENST00000608107 SPATA31A5Q5VU36 1347 aa13.7□□□□□ -0.22
ITGB5-211ENST00000608107 SPATA31A7Q8IWB4 1347 aa13.7□□□□□ -0.22
ITGB5-211ENST00000608107 WNK3Q9BYP7 1800 aa13.7□□□□□ -0.22
ITGB5-211ENST00000608107 WDR43Q15061 677 aaKnown RBP eCLIP13.7□□□□□ -0.22
ITGB5-211ENST00000608107 VPS72Q15906 364 aa13.7□□□□□ -0.22
ITGB5-211ENST00000608107 ATRNO75882 1429 aa13.7□□□□□ -0.22
ITGB5-211ENST00000608107 GLI3P10071 1580 aa13.7□□□□□ -0.22
ITGB5-211ENST00000608107 CCDC146Q8IYE0 955 aa13.69□□□□□ -0.22
ITGB5-211ENST00000608107 RSPH6AQ9H0K4 717 aa13.69□□□□□ -0.22
ITGB5-211ENST00000608107 QTRT2Q9H974 415 aaKnown RBP13.69□□□□□ -0.22
ITGB5-211ENST00000608107 SENP3-EIF4A1A0A087X0R7 540 aa13.68□□□□□ -0.22
ITGB5-211ENST00000608107 TRPC5Q9UL62 973 aaPredicted RBP13.68□□□□□ -0.22
ITGB5-211ENST00000608107 MEGF6O75095 1541 aa13.68□□□□□ -0.22
ITGB5-211ENST00000608107 KDRP35968 1356 aa13.68□□□□□ -0.22
ITGB5-211ENST00000608107 PRKAR2BP31323 418 aa13.67□□□□□ -0.22
ITGB5-211ENST00000608107 POTEAQ6S8J7 498 aa13.67□□□□□ -0.22
ITGB5-211ENST00000608107 TCP11L2Q8N4U5 519 aa13.67□□□□□ -0.22
ITGB5-211ENST00000608107 GJD4Q96KN9 370 aaPredicted RBP13.67□□□□□ -0.22
ITGB5-211ENST00000608107 FAM98CQ17RN3 349 aaKnown RBP13.66□□□□□ -0.22
ITGB5-211ENST00000608107 ZNF772Q68DY9 489 aaPredicted RBP13.66□□□□□ -0.22
ITGB5-211ENST00000608107 PLEKHF1Q96S99 279 aa13.66□□□□□ -0.22
ITGB5-211ENST00000608107 PHF23Q9BUL5 403 aaPredicted RBP13.66□□□□□ -0.22
ITGB5-211ENST00000608107 DISP2A7MBM2 1401 aa13.65□□□□□ -0.22
ITGB5-211ENST00000608107 PARP4Q9UKK3 1724 aaKnown RBP13.65□□□□□ -0.22
ITGB5-211ENST00000608107 FCHSD2O94868 740 aa13.65□□□□□ -0.22
ITGB5-211ENST00000608107 PHACTR3Q96KR7 559 aa13.65□□□□□ -0.22
ITGB5-211ENST00000608107 SHANK3Q9BYB0 1731 aa13.64□□□□□ -0.23
ITGB5-211ENST00000608107 DLG5Q8TDM6 1919 aa13.64□□□□□ -0.23
ITGB5-211ENST00000608107 IL2RBP14784 551 aa13.64□□□□□ -0.23
ITGB5-211ENST00000608107 RAPGEF4Q8WZA2 1011 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms