RNA–Protein interactions for RNA: ENST00000600499.5

LTBP4-228, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-228ENST00000600499 CDK12Q9NYV4 1490 aaPredicted RBP20.03■□□□□ 0.8
LTBP4-228ENST00000600499 GJD4Q96KN9 370 aaPredicted RBP20.02■□□□□ 0.8
LTBP4-228ENST00000600499 MAP3K19Q56UN5 1328 aa20.02■□□□□ 0.79
LTBP4-228ENST00000600499 IP6K1Q92551 441 aa20.01■□□□□ 0.79
LTBP4-228ENST00000600499 RTL1A6NKG5 1358 aa20■□□□□ 0.79
LTBP4-228ENST00000600499 SOX12O15370 315 aa20■□□□□ 0.79
LTBP4-228ENST00000600499 RXRBP28702 533 aa20■□□□□ 0.79
LTBP4-228ENST00000600499 BLMP54132 1417 aaPredicted RBP20■□□□□ 0.79
LTBP4-228ENST00000600499 SPATA31A5Q5VU36 1347 aa20■□□□□ 0.79
LTBP4-228ENST00000600499 SPATA31A7Q8IWB4 1347 aa20■□□□□ 0.79
LTBP4-228ENST00000600499 GLI3P10071 1580 aa20■□□□□ 0.79
LTBP4-228ENST00000600499 ONECUT3O60422 494 aaPredicted RBP19.99■□□□□ 0.79
LTBP4-228ENST00000600499 FBLN1P23142 703 aa19.99■□□□□ 0.79
LTBP4-228ENST00000600499 RGPD5Q99666 1765 aa19.98■□□□□ 0.79
LTBP4-228ENST00000600499 WDR17Q8IZU2 1322 aa19.97■□□□□ 0.79
LTBP4-228ENST00000600499 HOXC9P31274 260 aa19.96■□□□□ 0.79
LTBP4-228ENST00000600499 RRS1Q15050 365 aaKnown RBP19.96■□□□□ 0.79
LTBP4-228ENST00000600499 ILDR2Q71H61 639 aa19.96■□□□□ 0.79
LTBP4-228ENST00000600499 MAP2P11137 1827 aaKnown RBP19.96■□□□□ 0.79
LTBP4-228ENST00000600499 ERBB3P21860 1342 aa19.96■□□□□ 0.79
LTBP4-228ENST00000600499 SPATA31A1Q5TZJ5 1347 aa19.96■□□□□ 0.79
LTBP4-228ENST00000600499 CRB1P82279 1406 aa19.95■□□□□ 0.78
LTBP4-228ENST00000600499 SMG6Q86US8 1419 aaKnown RBP19.95■□□□□ 0.78
LTBP4-228ENST00000600499 EVA1CP58658 441 aa19.95■□□□□ 0.78
LTBP4-228ENST00000600499 LARP1Q6PKG0 1096 aaKnown RBP19.95■□□□□ 0.78
LTBP4-228ENST00000600499 MORC1Q86VD1 984 aa19.95■□□□□ 0.78
LTBP4-228ENST00000600499 POLKQ9UBT6 870 aa19.95■□□□□ 0.78
LTBP4-228ENST00000600499 PEAK1Q9H792 1746 aa19.95■□□□□ 0.78
LTBP4-228ENST00000600499 FLT4P35916 1363 aa19.95■□□□□ 0.78
LTBP4-228ENST00000600499 ZBTB7CA1YPR0 619 aa19.94■□□□□ 0.78
LTBP4-228ENST00000600499 STRN4Q9NRL3 753 aa19.94■□□□□ 0.78
LTBP4-228ENST00000600499 THRAP3Q9Y2W1 955 aaKnown RBP19.94■□□□□ 0.78
LTBP4-228ENST00000600499 INSRP06213 1382 aa19.94■□□□□ 0.78
LTBP4-228ENST00000600499 ZNF316A6NFI3 1004 aaPredicted RBP19.93■□□□□ 0.78
LTBP4-228ENST00000600499 AMPHP49418 695 aa19.93■□□□□ 0.78
LTBP4-228ENST00000600499 BARGINQ6ZT62 677 aa19.93■□□□□ 0.78
LTBP4-228ENST00000600499 CARD10Q9BWT7 1032 aa19.92■□□□□ 0.78
LTBP4-228ENST00000600499 EMILIN1Q9Y6C2 1016 aa19.92■□□□□ 0.78
LTBP4-228ENST00000600499 RGS12O14924 1447 aa19.92■□□□□ 0.78
LTBP4-228ENST00000600499 CC2D1BQ5T0F9 858 aaKnown RBP19.9■□□□□ 0.78
LTBP4-228ENST00000600499 ANKRD24Q8TF21 1146 aa19.9■□□□□ 0.78
LTBP4-228ENST00000600499 FAM208AQ9UK61 1670 aaKnown RBP19.9■□□□□ 0.78
LTBP4-228ENST00000600499 DDX10Q13206 875 aaKnown RBP19.89■□□□□ 0.77
LTBP4-228ENST00000600499 TCP11L2Q8N4U5 519 aa19.89■□□□□ 0.77
LTBP4-228ENST00000600499 THSD7AQ9UPZ6 1657 aa19.89■□□□□ 0.77
LTBP4-228ENST00000600499 CCDC9Q9Y3X0 531 aaKnown RBP19.89■□□□□ 0.77
LTBP4-228ENST00000600499 HSP90AB2PQ58FF8 381 aa19.88■□□□□ 0.77
LTBP4-228ENST00000600499 TOM1L2Q6ZVM7 507 aa19.88■□□□□ 0.77
LTBP4-228ENST00000600499 TNNT2P45379 298 aaPredicted RBP19.86■□□□□ 0.77
LTBP4-228ENST00000600499 DISP2A7MBM2 1401 aa19.85■□□□□ 0.77
LTBP4-228ENST00000600499 CSB-PGBD3P0DP91 1061 aa19.85■□□□□ 0.77
LTBP4-228ENST00000600499 FAM98CQ17RN3 349 aaKnown RBP19.85■□□□□ 0.77
LTBP4-228ENST00000600499 SEPT12Q8IYM1 358 aa19.85■□□□□ 0.77
LTBP4-228ENST00000600499 NCAPD2Q15021 1401 aa19.85■□□□□ 0.77
LTBP4-228ENST00000600499 PARD3Q8TEW0 1356 aa19.84■□□□□ 0.77
LTBP4-228ENST00000600499 CDCA7Q9BWT1 371 aaPredicted RBP19.84■□□□□ 0.77
LTBP4-228ENST00000600499 WNK3Q9BYP7 1800 aa19.83■□□□□ 0.77
LTBP4-228ENST00000600499 PARP4Q9UKK3 1724 aaKnown RBP19.82■□□□□ 0.76
LTBP4-228ENST00000600499 NLRP2Q9NX02 1062 aa19.82■□□□□ 0.76
LTBP4-228ENST00000600499 USP35Q9P2H5 1018 aa19.82■□□□□ 0.76
LTBP4-228ENST00000600499 MTHFSP49914 203 aa19.81■□□□□ 0.76
LTBP4-228ENST00000600499 NBPF6Q5VWK0 638 aa19.81■□□□□ 0.76
LTBP4-228ENST00000600499 NBPF4Q96M43 638 aa19.81■□□□□ 0.76
LTBP4-228ENST00000600499 BRWD3Q6RI45 1802 aa19.81■□□□□ 0.76
LTBP4-228ENST00000600499 PPM1GO15355 546 aaPredicted RBP19.8■□□□□ 0.76
LTBP4-228ENST00000600499 LTV1Q96GA3 475 aaPredicted RBP19.8■□□□□ 0.76
LTBP4-228ENST00000600499 RGPD2P0DJD1 1756 aa19.8■□□□□ 0.76
LTBP4-228ENST00000600499 EIF4A2Q14240 407 aaKnown RBP19.79■□□□□ 0.76
LTBP4-228ENST00000600499 PPP2R1AP30153 589 aa19.78■□□□□ 0.76
LTBP4-228ENST00000600499 RALBP1Q15311 655 aa19.78■□□□□ 0.76
LTBP4-228ENST00000600499 COL3A1P02461 1466 aaPredicted RBP19.76■□□□□ 0.75
LTBP4-228ENST00000600499 PLEKHG2Q9H7P9 1386 aa19.76■□□□□ 0.75
LTBP4-228ENST00000600499 IL2RBP14784 551 aa19.76■□□□□ 0.75
LTBP4-228ENST00000600499 IL13P35225 146 aa19.76■□□□□ 0.75
LTBP4-228ENST00000600499 KRT27Q7Z3Y8 459 aa19.76■□□□□ 0.75
LTBP4-228ENST00000600499 EYA1Q99502 592 aa19.76■□□□□ 0.75
LTBP4-228ENST00000600499 LRRC37A3O60309 1634 aa19.76■□□□□ 0.75
LTBP4-228ENST00000600499 IGSF1Q8N6C5 1336 aa19.76■□□□□ 0.75
LTBP4-228ENST00000600499 RGPD1P0DJD0 1748 aa19.75■□□□□ 0.75
LTBP4-228ENST00000600499 DDB1Q16531 1140 aa19.73■□□□□ 0.75
LTBP4-228ENST00000600499 OVOS2A0A0G2JMS6 1433 aa19.72■□□□□ 0.75
LTBP4-228ENST00000600499 BCL9O00512 1426 aa19.72■□□□□ 0.75
LTBP4-228ENST00000600499 SOCS7O14512 581 aa19.72■□□□□ 0.75
LTBP4-228ENST00000600499 TNS2Q63HR2 1409 aa19.72■□□□□ 0.75
LTBP4-228ENST00000600499 MEGF6O75095 1541 aa19.71■□□□□ 0.75
LTBP4-228ENST00000600499 KDRP35968 1356 aa19.71■□□□□ 0.75
LTBP4-228ENST00000600499 EXOC5O00471 708 aa19.71■□□□□ 0.75
LTBP4-228ENST00000600499 CNGB1Q14028 1251 aaPredicted RBP19.71■□□□□ 0.75
LTBP4-228ENST00000600499 PRKRIP1Q9H875 184 aaPredicted RBP19.71■□□□□ 0.75
LTBP4-228ENST00000600499 A0A0G2JS52 829 aa19.7■□□□□ 0.74
LTBP4-228ENST00000600499 DIAPH1O60610 1272 aaKnown RBP19.7■□□□□ 0.74
LTBP4-228ENST00000600499 MYT1Q01538 1121 aa19.7■□□□□ 0.74
LTBP4-228ENST00000600499 PDE3BQ13370 1112 aa19.7■□□□□ 0.74
LTBP4-228ENST00000600499 USHBP1Q8N6Y0 703 aa19.7■□□□□ 0.74
LTBP4-228ENST00000600499 RAPGEF4Q8WZA2 1011 aa19.68■□□□□ 0.74
LTBP4-228ENST00000600499 CFAP53Q96M91 514 aa19.68■□□□□ 0.74
LTBP4-228ENST00000600499 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.68■□□□□ 0.74
LTBP4-228ENST00000600499 MYBBP1AQ9BQG0 1328 aaKnown RBP19.68■□□□□ 0.74
LTBP4-228ENST00000600499 TATP17735 454 aaPredicted RBP19.67■□□□□ 0.74
LTBP4-228ENST00000600499 FAM196AQ6ZSG2 479 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms