RNA–Protein interactions for RNA: ENST00000596957.1

ARHGEF1-214, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-214ENST00000596957 USP21Q9UK80 565 aa20.18■□□□□ 0.82
ARHGEF1-214ENST00000596957 RTL1A6NKG5 1358 aa20.18■□□□□ 0.82
ARHGEF1-214ENST00000596957 FLT4P35916 1363 aa20.18■□□□□ 0.82
ARHGEF1-214ENST00000596957 MTHFSP49914 203 aa20.17■□□□□ 0.82
ARHGEF1-214ENST00000596957 LTV1Q96GA3 475 aaPredicted RBP20.17■□□□□ 0.82
ARHGEF1-214ENST00000596957 CFAP53Q96M91 514 aa20.16■□□□□ 0.82
ARHGEF1-214ENST00000596957 CCDC9Q9Y3X0 531 aaKnown RBP20.16■□□□□ 0.82
ARHGEF1-214ENST00000596957 MYBBP1AQ9BQG0 1328 aaKnown RBP20.16■□□□□ 0.82
ARHGEF1-214ENST00000596957 KIF24Q5T7B8 1368 aa20.16■□□□□ 0.82
ARHGEF1-214ENST00000596957 COL14A1Q05707 1796 aaKnown RBP20.16■□□□□ 0.82
ARHGEF1-214ENST00000596957 AXIN2Q9Y2T1 843 aa20.15■□□□□ 0.82
ARHGEF1-214ENST00000596957 BLMP54132 1417 aaPredicted RBP20.14■□□□□ 0.81
ARHGEF1-214ENST00000596957 SMG6Q86US8 1419 aaKnown RBP20.14■□□□□ 0.81
ARHGEF1-214ENST00000596957 HSP90AB2PQ58FF8 381 aa20.14■□□□□ 0.81
ARHGEF1-214ENST00000596957 FNBP4Q8N3X1 1017 aaPredicted RBP20.14■□□□□ 0.81
ARHGEF1-214ENST00000596957 ANKRD24Q8TF21 1146 aa20.14■□□□□ 0.81
ARHGEF1-214ENST00000596957 ZNF772Q68DY9 489 aaPredicted RBP20.13■□□□□ 0.81
ARHGEF1-214ENST00000596957 UNC5CLQ8IV45 518 aa20.13■□□□□ 0.81
ARHGEF1-214ENST00000596957 SLIT2O94813 1529 aa20.12■□□□□ 0.81
ARHGEF1-214ENST00000596957 ABCC6O95255 1503 aa20.12■□□□□ 0.81
ARHGEF1-214ENST00000596957 INSRP06213 1382 aa20.11■□□□□ 0.81
ARHGEF1-214ENST00000596957 CAMTA1Q9Y6Y1 1673 aa20.11■□□□□ 0.81
ARHGEF1-214ENST00000596957 TOM1L2Q6ZVM7 507 aa20.11■□□□□ 0.81
ARHGEF1-214ENST00000596957 NLRP2Q9NX02 1062 aa20.11■□□□□ 0.81
ARHGEF1-214ENST00000596957 CDK12Q9NYV4 1490 aaPredicted RBP20.11■□□□□ 0.81
ARHGEF1-214ENST00000596957 LTN1O94822 1766 aa20.11■□□□□ 0.81
ARHGEF1-214ENST00000596957 COL5A2P05997 1499 aaPredicted RBP20.1■□□□□ 0.81
ARHGEF1-214ENST00000596957 ERBB3P21860 1342 aa20.09■□□□□ 0.81
ARHGEF1-214ENST00000596957 LARP1Q6PKG0 1096 aaKnown RBP20.09■□□□□ 0.81
ARHGEF1-214ENST00000596957 TRPC5Q9UL62 973 aaPredicted RBP20.09■□□□□ 0.81
ARHGEF1-214ENST00000596957 PLCH1Q4KWH8 1693 aa20.09■□□□□ 0.81
ARHGEF1-214ENST00000596957 WDR17Q8IZU2 1322 aa20.08■□□□□ 0.81
ARHGEF1-214ENST00000596957 LMO7Q8WWI1 1683 aa20.08■□□□□ 0.81
ARHGEF1-214ENST00000596957 BCL9LQ86UU0 1499 aa20.08■□□□□ 0.81
ARHGEF1-214ENST00000596957 DIAPH1O60610 1272 aaKnown RBP20.08■□□□□ 0.81
ARHGEF1-214ENST00000596957 USP35Q9P2H5 1018 aa20.08■□□□□ 0.81
ARHGEF1-214ENST00000596957 PEAK1Q9H792 1746 aa20.07■□□□□ 0.8
ARHGEF1-214ENST00000596957 EIF4A2Q14240 407 aaKnown RBP20.07■□□□□ 0.8
ARHGEF1-214ENST00000596957 QTRT2Q9H974 415 aaKnown RBP20.07■□□□□ 0.8
ARHGEF1-214ENST00000596957 VPS72Q15906 364 aa20.06■□□□□ 0.8
ARHGEF1-214ENST00000596957 U2SURPO15042 1029 aaKnown RBP20.05■□□□□ 0.8
ARHGEF1-214ENST00000596957 NUDCQ9Y266 331 aa20.05■□□□□ 0.8
ARHGEF1-214ENST00000596957 COL18A1P39060 1754 aa20.05■□□□□ 0.8
ARHGEF1-214ENST00000596957 NWD2Q9ULI1 1742 aa20.05■□□□□ 0.8
ARHGEF1-214ENST00000596957 CRB1P82279 1406 aa20.04■□□□□ 0.8
ARHGEF1-214ENST00000596957 MAP2P11137 1827 aaKnown RBP20.04■□□□□ 0.8
ARHGEF1-214ENST00000596957 A0A0G2JS52 829 aa20.02■□□□□ 0.8
ARHGEF1-214ENST00000596957 MYT1Q01538 1121 aa20.02■□□□□ 0.8
ARHGEF1-214ENST00000596957 USHBP1Q8N6Y0 703 aa20.02■□□□□ 0.8
ARHGEF1-214ENST00000596957 CARD10Q9BWT7 1032 aa20.02■□□□□ 0.8
ARHGEF1-214ENST00000596957 ATRNO75882 1429 aa20.02■□□□□ 0.79
ARHGEF1-214ENST00000596957 SPATA31A5Q5VU36 1347 aa20.02■□□□□ 0.79
ARHGEF1-214ENST00000596957 SPATA31A7Q8IWB4 1347 aa20.02■□□□□ 0.79
ARHGEF1-214ENST00000596957 IL13P35225 146 aa20.01■□□□□ 0.79
ARHGEF1-214ENST00000596957 NBPF6Q5VWK0 638 aa20.01■□□□□ 0.79
ARHGEF1-214ENST00000596957 GJD4Q96KN9 370 aaPredicted RBP20.01■□□□□ 0.79
ARHGEF1-214ENST00000596957 NBPF4Q96M43 638 aa20.01■□□□□ 0.79
ARHGEF1-214ENST00000596957 SPATA31A1Q5TZJ5 1347 aa20.01■□□□□ 0.79
ARHGEF1-214ENST00000596957 NRAPQ86VF7 1730 aa20■□□□□ 0.79
ARHGEF1-214ENST00000596957 TCP11L2Q8N4U5 519 aa20■□□□□ 0.79
ARHGEF1-214ENST00000596957 EYA1Q99502 592 aa20■□□□□ 0.79
ARHGEF1-214ENST00000596957 MRS2Q9HD23 443 aa20■□□□□ 0.79
ARHGEF1-214ENST00000596957 RGS17Q9UGC6 210 aaPredicted RBP20■□□□□ 0.79
ARHGEF1-214ENST00000596957 RXRBP28702 533 aa19.99■□□□□ 0.79
ARHGEF1-214ENST00000596957 WDR43Q15061 677 aaKnown RBP eCLIP19.99■□□□□ 0.79
ARHGEF1-214ENST00000596957 U2AF1L5P0DN76 240 aaPredicted RBP19.98■□□□□ 0.79
ARHGEF1-214ENST00000596957 RBM6P78332 1123 aaKnown RBP19.98■□□□□ 0.79
ARHGEF1-214ENST00000596957 U2AF1Q01081 240 aaKnown RBP eCLIP19.98■□□□□ 0.79
ARHGEF1-214ENST00000596957 FAM98CQ17RN3 349 aaKnown RBP19.98■□□□□ 0.79
ARHGEF1-214ENST00000596957 THRAP3Q9Y2W1 955 aaKnown RBP19.98■□□□□ 0.79
ARHGEF1-214ENST00000596957 COL3A1P02461 1466 aaPredicted RBP19.98■□□□□ 0.79
ARHGEF1-214ENST00000596957 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.97■□□□□ 0.79
ARHGEF1-214ENST00000596957 POTEAQ6S8J7 498 aa19.97■□□□□ 0.79
ARHGEF1-214ENST00000596957 MIER1Q8N108 512 aa19.97■□□□□ 0.79
ARHGEF1-214ENST00000596957 RAPGEF4Q8WZA2 1011 aa19.97■□□□□ 0.79
ARHGEF1-214ENST00000596957 RGPD5Q99666 1765 aa19.97■□□□□ 0.79
ARHGEF1-214ENST00000596957 HMOX1P09601 288 aa19.96■□□□□ 0.79
ARHGEF1-214ENST00000596957 SULT6B1Q6IMI4 303 aa19.96■□□□□ 0.79
ARHGEF1-214ENST00000596957 IGSF1Q8N6C5 1336 aa19.96■□□□□ 0.79
ARHGEF1-214ENST00000596957 IL2RBP14784 551 aa19.94■□□□□ 0.78
ARHGEF1-214ENST00000596957 CDCA7Q9BWT1 371 aaPredicted RBP19.94■□□□□ 0.78
ARHGEF1-214ENST00000596957 FAM208AQ9UK61 1670 aaKnown RBP19.94■□□□□ 0.78
ARHGEF1-214ENST00000596957 TATP17735 454 aaPredicted RBP19.93■□□□□ 0.78
ARHGEF1-214ENST00000596957 CCDC184Q52MB2 194 aa19.93■□□□□ 0.78
ARHGEF1-214ENST00000596957 BARGINQ6ZT62 677 aa19.93■□□□□ 0.78
ARHGEF1-214ENST00000596957 AEBP1Q8IUX7 1158 aa19.93■□□□□ 0.78
ARHGEF1-214ENST00000596957 CCER2I3L3R5 266 aa19.91■□□□□ 0.78
ARHGEF1-214ENST00000596957 NEFMP07197 916 aa19.91■□□□□ 0.78
ARHGEF1-214ENST00000596957 GLI3P10071 1580 aa19.9■□□□□ 0.78
ARHGEF1-214ENST00000596957 SEPT12Q8IYM1 358 aa19.89■□□□□ 0.77
ARHGEF1-214ENST00000596957 PNNQ9H307 717 aaKnown RBP19.89■□□□□ 0.77
ARHGEF1-214ENST00000596957 DDB1Q16531 1140 aa19.88■□□□□ 0.77
ARHGEF1-214ENST00000596957 EXOC5O00471 708 aa19.87■□□□□ 0.77
ARHGEF1-214ENST00000596957 FCHSD2O94868 740 aa19.87■□□□□ 0.77
ARHGEF1-214ENST00000596957 PRKAR2BP31323 418 aa19.87■□□□□ 0.77
ARHGEF1-214ENST00000596957 FAM9BQ8IZU0 186 aa19.87■□□□□ 0.77
ARHGEF1-214ENST00000596957 NCAPD2Q15021 1401 aa19.86■□□□□ 0.77
ARHGEF1-214ENST00000596957 KDRP35968 1356 aa19.86■□□□□ 0.77
ARHGEF1-214ENST00000596957 PDE3BQ13370 1112 aa19.86■□□□□ 0.77
ARHGEF1-214ENST00000596957 SPG7Q9UQ90 795 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms