RNA–Protein interactions for RNA: ENST00000596545.5

FARP1-218, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-218ENST00000596545 STRN4Q9NRL3 753 aa18.21■□□□□ 0.51
FARP1-218ENST00000596545 CCDC9Q9Y3X0 531 aaKnown RBP18.21■□□□□ 0.51
FARP1-218ENST00000596545 MAP2P11137 1827 aaKnown RBP18.21■□□□□ 0.51
FARP1-218ENST00000596545 GJD4Q96KN9 370 aaPredicted RBP18.2■□□□□ 0.5
FARP1-218ENST00000596545 EVA1CP58658 441 aa18.19■□□□□ 0.5
FARP1-218ENST00000596545 KNSTRNQ9Y448 316 aa18.19■□□□□ 0.5
FARP1-218ENST00000596545 NSD2O96028 1365 aa18.18■□□□□ 0.5
FARP1-218ENST00000596545 RGS12O14924 1447 aa18.18■□□□□ 0.5
FARP1-218ENST00000596545 NPC1L1Q9UHC9 1359 aa18.17■□□□□ 0.5
FARP1-218ENST00000596545 BRWD3Q6RI45 1802 aa18.16■□□□□ 0.5
FARP1-218ENST00000596545 ZNF316A6NFI3 1004 aaPredicted RBP18.16■□□□□ 0.5
FARP1-218ENST00000596545 PER1O15534 1290 aaPredicted RBP18.16■□□□□ 0.5
FARP1-218ENST00000596545 FBLN1P23142 703 aa18.16■□□□□ 0.5
FARP1-218ENST00000596545 AXIN2Q9Y2T1 843 aa18.16■□□□□ 0.5
FARP1-218ENST00000596545 SPATA31A5Q5VU36 1347 aa18.16■□□□□ 0.5
FARP1-218ENST00000596545 SPATA31A7Q8IWB4 1347 aa18.16■□□□□ 0.5
FARP1-218ENST00000596545 WNK3Q9BYP7 1800 aa18.16■□□□□ 0.5
FARP1-218ENST00000596545 FAM208AQ9UK61 1670 aaKnown RBP18.15■□□□□ 0.5
FARP1-218ENST00000596545 PEAK1Q9H792 1746 aa18.15■□□□□ 0.5
FARP1-218ENST00000596545 LARP1Q6PKG0 1096 aaKnown RBP18.15■□□□□ 0.5
FARP1-218ENST00000596545 MAP3K19Q56UN5 1328 aa18.15■□□□□ 0.5
FARP1-218ENST00000596545 BLMP54132 1417 aaPredicted RBP18.15■□□□□ 0.5
FARP1-218ENST00000596545 RRS1Q15050 365 aaKnown RBP18.14■□□□□ 0.49
FARP1-218ENST00000596545 CRB1P82279 1406 aa18.14■□□□□ 0.49
FARP1-218ENST00000596545 AMPHP49418 695 aa18.13■□□□□ 0.49
FARP1-218ENST00000596545 SPATA31A1Q5TZJ5 1347 aa18.13■□□□□ 0.49
FARP1-218ENST00000596545 RTL1A6NKG5 1358 aa18.13■□□□□ 0.49
FARP1-218ENST00000596545 THSD7AQ9UPZ6 1657 aa18.12■□□□□ 0.49
FARP1-218ENST00000596545 RGPD2P0DJD1 1756 aa18.12■□□□□ 0.49
FARP1-218ENST00000596545 AMER1Q5JTC6 1135 aaPredicted RBP18.12■□□□□ 0.49
FARP1-218ENST00000596545 IP6K1Q92551 441 aa18.12■□□□□ 0.49
FARP1-218ENST00000596545 USP35Q9P2H5 1018 aa18.12■□□□□ 0.49
FARP1-218ENST00000596545 WDR17Q8IZU2 1322 aa18.12■□□□□ 0.49
FARP1-218ENST00000596545 CSB-PGBD3P0DP91 1061 aa18.11■□□□□ 0.49
FARP1-218ENST00000596545 TOM1L2Q6ZVM7 507 aa18.11■□□□□ 0.49
FARP1-218ENST00000596545 ERBB3P21860 1342 aa18.11■□□□□ 0.49
FARP1-218ENST00000596545 HOXC9P31274 260 aa18.1■□□□□ 0.49
FARP1-218ENST00000596545 TNNT2P45379 298 aaPredicted RBP18.1■□□□□ 0.49
FARP1-218ENST00000596545 FAM98CQ17RN3 349 aaKnown RBP18.1■□□□□ 0.49
FARP1-218ENST00000596545 MORC1Q86VD1 984 aa18.1■□□□□ 0.49
FARP1-218ENST00000596545 FLT4P35916 1363 aa18.09■□□□□ 0.49
FARP1-218ENST00000596545 KIF24Q5T7B8 1368 aa18.09■□□□□ 0.49
FARP1-218ENST00000596545 A0A0G2JS52 829 aa18.09■□□□□ 0.49
FARP1-218ENST00000596545 MYT1Q01538 1121 aa18.09■□□□□ 0.49
FARP1-218ENST00000596545 PARP4Q9UKK3 1724 aaKnown RBP18.09■□□□□ 0.49
FARP1-218ENST00000596545 SEPT12Q8IYM1 358 aa18.08■□□□□ 0.48
FARP1-218ENST00000596545 TCP11L2Q8N4U5 519 aa18.08■□□□□ 0.48
FARP1-218ENST00000596545 ANKRD24Q8TF21 1146 aa18.08■□□□□ 0.48
FARP1-218ENST00000596545 EMILIN1Q9Y6C2 1016 aa18.08■□□□□ 0.48
FARP1-218ENST00000596545 ONECUT3O60422 494 aaPredicted RBP18.07■□□□□ 0.48
FARP1-218ENST00000596545 CC2D1BQ5T0F9 858 aaKnown RBP18.07■□□□□ 0.48
FARP1-218ENST00000596545 PPM1GO15355 546 aaPredicted RBP18.06■□□□□ 0.48
FARP1-218ENST00000596545 BARGINQ6ZT62 677 aa18.06■□□□□ 0.48
FARP1-218ENST00000596545 LTV1Q96GA3 475 aaPredicted RBP18.06■□□□□ 0.48
FARP1-218ENST00000596545 THRAP3Q9Y2W1 955 aaKnown RBP18.06■□□□□ 0.48
FARP1-218ENST00000596545 SMG6Q86US8 1419 aaKnown RBP18.06■□□□□ 0.48
FARP1-218ENST00000596545 LRRC37A3O60309 1634 aa18.05■□□□□ 0.48
FARP1-218ENST00000596545 INSRP06213 1382 aa18.05■□□□□ 0.48
FARP1-218ENST00000596545 CARD10Q9BWT7 1032 aa18.05■□□□□ 0.48
FARP1-218ENST00000596545 NLRP2Q9NX02 1062 aa18.05■□□□□ 0.48
FARP1-218ENST00000596545 CNGB1Q14028 1251 aaPredicted RBP18.04■□□□□ 0.48
FARP1-218ENST00000596545 POLKQ9UBT6 870 aa18.04■□□□□ 0.48
FARP1-218ENST00000596545 SOCS7O14512 581 aa18.03■□□□□ 0.48
FARP1-218ENST00000596545 HSP90AB2PQ58FF8 381 aa18.03■□□□□ 0.48
FARP1-218ENST00000596545 DDX10Q13206 875 aaKnown RBP18.01■□□□□ 0.47
FARP1-218ENST00000596545 DISP2A7MBM2 1401 aa18■□□□□ 0.47
FARP1-218ENST00000596545 KRT27Q7Z3Y8 459 aa18■□□□□ 0.47
FARP1-218ENST00000596545 CDCA7Q9BWT1 371 aaPredicted RBP17.98■□□□□ 0.47
FARP1-218ENST00000596545 RALBP1Q15311 655 aa17.97■□□□□ 0.47
FARP1-218ENST00000596545 NBPF6Q5VWK0 638 aa17.96■□□□□ 0.47
FARP1-218ENST00000596545 NBPF4Q96M43 638 aa17.96■□□□□ 0.47
FARP1-218ENST00000596545 IL2RBP14784 551 aa17.95■□□□□ 0.46
FARP1-218ENST00000596545 PDE3BQ13370 1112 aa17.95■□□□□ 0.46
FARP1-218ENST00000596545 DDB1Q16531 1140 aa17.95■□□□□ 0.46
FARP1-218ENST00000596545 USHBP1Q8N6Y0 703 aa17.95■□□□□ 0.46
FARP1-218ENST00000596545 TNS2Q63HR2 1409 aa17.95■□□□□ 0.46
FARP1-218ENST00000596545 SHANK3Q9BYB0 1731 aa17.95■□□□□ 0.46
FARP1-218ENST00000596545 MTHFSP49914 203 aa17.94■□□□□ 0.46
FARP1-218ENST00000596545 EIF4A2Q14240 407 aaKnown RBP17.94■□□□□ 0.46
FARP1-218ENST00000596545 RGPD1P0DJD0 1748 aa17.94■□□□□ 0.46
FARP1-218ENST00000596545 MEGF6O75095 1541 aa17.93■□□□□ 0.46
FARP1-218ENST00000596545 FAM182BQ5T319 152 aa17.93■□□□□ 0.46
FARP1-218ENST00000596545 SBF2Q86WG5 1849 aa17.93■□□□□ 0.46
FARP1-218ENST00000596545 NCAPD2Q15021 1401 aa17.92■□□□□ 0.46
FARP1-218ENST00000596545 PARD3Q8TEW0 1356 aa17.91■□□□□ 0.46
FARP1-218ENST00000596545 UPF1Q92900 1129 aaKnown RBP eCLIP17.91■□□□□ 0.46
FARP1-218ENST00000596545 PKD1L3Q7Z443 1732 aa17.91■□□□□ 0.46
FARP1-218ENST00000596545 OVOS2A0A0G2JMS6 1433 aa17.9■□□□□ 0.46
FARP1-218ENST00000596545 TNS1Q9HBL0 1735 aaKnown RBP17.9■□□□□ 0.46
FARP1-218ENST00000596545 EXOC5O00471 708 aa17.9■□□□□ 0.46
FARP1-218ENST00000596545 EYA1Q99502 592 aa17.9■□□□□ 0.46
FARP1-218ENST00000596545 COL3A1P02461 1466 aaPredicted RBP17.89■□□□□ 0.45
FARP1-218ENST00000596545 KAT6BQ8WYB5 2073 aa17.89■□□□□ 0.45
FARP1-218ENST00000596545 PPP2R1AP30153 589 aa17.89■□□□□ 0.45
FARP1-218ENST00000596545 RAPGEF4Q8WZA2 1011 aa17.89■□□□□ 0.45
FARP1-218ENST00000596545 EP400Q96L91 3159 aa17.88■□□□□ 0.45
FARP1-218ENST00000596545 FAM196AQ6ZSG2 479 aa17.88■□□□□ 0.45
FARP1-218ENST00000596545 IGSF1Q8N6C5 1336 aa17.88■□□□□ 0.45
FARP1-218ENST00000596545 TATP17735 454 aaPredicted RBP17.87■□□□□ 0.45
FARP1-218ENST00000596545 PLEKHG2Q9H7P9 1386 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms