RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 MORC1Q86VD1 984 aa26.37■■□□□ 1.81
PNKP-207ENST00000596014 TRPC5Q9UL62 973 aaPredicted RBP26.37■■□□□ 1.81
PNKP-207ENST00000596014 NPC1L1Q9UHC9 1359 aa26.36■■□□□ 1.81
PNKP-207ENST00000596014 RRS1Q15050 365 aaKnown RBP26.36■■□□□ 1.81
PNKP-207ENST00000596014 TNNT2P45379 298 aaPredicted RBP26.35■■□□□ 1.81
PNKP-207ENST00000596014 MAP2P11137 1827 aaKnown RBP26.35■■□□□ 1.81
PNKP-207ENST00000596014 ATRNO75882 1429 aa26.34■■□□□ 1.81
PNKP-207ENST00000596014 ABCC6O95255 1503 aa26.34■■□□□ 1.81
PNKP-207ENST00000596014 EVA1CP58658 441 aa26.34■■□□□ 1.81
PNKP-207ENST00000596014 STRN4Q9NRL3 753 aa26.34■■□□□ 1.81
PNKP-207ENST00000596014 VPS72Q15906 364 aa26.33■■□□□ 1.81
PNKP-207ENST00000596014 CNGB1Q14028 1251 aaPredicted RBP26.32■■□□□ 1.8
PNKP-207ENST00000596014 IP6K1Q92551 441 aa26.32■■□□□ 1.8
PNKP-207ENST00000596014 COL5A2P05997 1499 aaPredicted RBP26.32■■□□□ 1.8
PNKP-207ENST00000596014 AMPHP49418 695 aa26.31■■□□□ 1.8
PNKP-207ENST00000596014 HOXC9P31274 260 aa26.29■■□□□ 1.8
PNKP-207ENST00000596014 GJD4Q96KN9 370 aaPredicted RBP26.29■■□□□ 1.8
PNKP-207ENST00000596014 POLKQ9UBT6 870 aa26.29■■□□□ 1.8
PNKP-207ENST00000596014 CCDC9Q9Y3X0 531 aaKnown RBP26.29■■□□□ 1.8
PNKP-207ENST00000596014 EMILIN1Q9Y6C2 1016 aa26.29■■□□□ 1.8
PNKP-207ENST00000596014 RXRBP28702 533 aa26.28■■□□□ 1.8
PNKP-207ENST00000596014 RBM6P78332 1123 aaKnown RBP26.28■■□□□ 1.8
PNKP-207ENST00000596014 LARP1Q6PKG0 1096 aaKnown RBP26.28■■□□□ 1.8
PNKP-207ENST00000596014 PEAK1Q9H792 1746 aa26.27■■□□□ 1.8
PNKP-207ENST00000596014 RTL1A6NKG5 1358 aa26.27■■□□□ 1.8
PNKP-207ENST00000596014 KIF24Q5T7B8 1368 aa26.27■■□□□ 1.8
PNKP-207ENST00000596014 BLMP54132 1417 aaPredicted RBP26.27■■□□□ 1.8
PNKP-207ENST00000596014 PPM1GO15355 546 aaPredicted RBP26.25■■□□□ 1.79
PNKP-207ENST00000596014 SPATA31A5Q5VU36 1347 aa26.25■■□□□ 1.79
PNKP-207ENST00000596014 SPATA31A7Q8IWB4 1347 aa26.25■■□□□ 1.79
PNKP-207ENST00000596014 WDR17Q8IZU2 1322 aa26.25■■□□□ 1.79
PNKP-207ENST00000596014 FLT4P35916 1363 aa26.25■■□□□ 1.79
PNKP-207ENST00000596014 GLI3P10071 1580 aa26.24■■□□□ 1.79
PNKP-207ENST00000596014 HSP90AB2PQ58FF8 381 aa26.24■■□□□ 1.79
PNKP-207ENST00000596014 ANKRD24Q8TF21 1146 aa26.24■■□□□ 1.79
PNKP-207ENST00000596014 ERBB3P21860 1342 aa26.24■■□□□ 1.79
PNKP-207ENST00000596014 CSB-PGBD3P0DP91 1061 aa26.23■■□□□ 1.79
PNKP-207ENST00000596014 SPATA31A1Q5TZJ5 1347 aa26.23■■□□□ 1.79
PNKP-207ENST00000596014 TOM1L2Q6ZVM7 507 aa26.22■■□□□ 1.79
PNKP-207ENST00000596014 CRB1P82279 1406 aa26.22■■□□□ 1.79
PNKP-207ENST00000596014 LTV1Q96GA3 475 aaPredicted RBP26.22■■□□□ 1.79
PNKP-207ENST00000596014 INSRP06213 1382 aa26.21■■□□□ 1.79
PNKP-207ENST00000596014 USP35Q9P2H5 1018 aa26.21■■□□□ 1.79
PNKP-207ENST00000596014 SMG6Q86US8 1419 aaKnown RBP26.19■■□□□ 1.78
PNKP-207ENST00000596014 CARD10Q9BWT7 1032 aa26.17■■□□□ 1.78
PNKP-207ENST00000596014 ONECUT3O60422 494 aaPredicted RBP26.16■■□□□ 1.78
PNKP-207ENST00000596014 MTHFSP49914 203 aa26.16■■□□□ 1.78
PNKP-207ENST00000596014 FAM98CQ17RN3 349 aaKnown RBP26.16■■□□□ 1.78
PNKP-207ENST00000596014 ILDR2Q71H61 639 aa26.16■■□□□ 1.78
PNKP-207ENST00000596014 TCP11L2Q8N4U5 519 aa26.16■■□□□ 1.78
PNKP-207ENST00000596014 NLRP2Q9NX02 1062 aa26.16■■□□□ 1.78
PNKP-207ENST00000596014 FAM208AQ9UK61 1670 aaKnown RBP26.15■■□□□ 1.78
PNKP-207ENST00000596014 CDK12Q9NYV4 1490 aaPredicted RBP26.15■■□□□ 1.78
PNKP-207ENST00000596014 THRAP3Q9Y2W1 955 aaKnown RBP26.15■■□□□ 1.78
PNKP-207ENST00000596014 RGPD2P0DJD1 1756 aa26.15■■□□□ 1.78
PNKP-207ENST00000596014 PARD3Q8TEW0 1356 aa26.14■■□□□ 1.78
PNKP-207ENST00000596014 BARGINQ6ZT62 677 aa26.13■■□□□ 1.77
PNKP-207ENST00000596014 PPP2R1AP30153 589 aa26.12■■□□□ 1.77
PNKP-207ENST00000596014 RGS12O14924 1447 aa26.12■■□□□ 1.77
PNKP-207ENST00000596014 RALBP1Q15311 655 aa26.1■■□□□ 1.77
PNKP-207ENST00000596014 NBPF6Q5VWK0 638 aa26.1■■□□□ 1.77
PNKP-207ENST00000596014 SEPT12Q8IYM1 358 aa26.1■■□□□ 1.77
PNKP-207ENST00000596014 NBPF4Q96M43 638 aa26.1■■□□□ 1.77
PNKP-207ENST00000596014 EIF4A2Q14240 407 aaKnown RBP26.09■■□□□ 1.77
PNKP-207ENST00000596014 A0A0G2JS52 829 aa26.08■■□□□ 1.77
PNKP-207ENST00000596014 MYT1Q01538 1121 aa26.08■■□□□ 1.77
PNKP-207ENST00000596014 THSD7AQ9UPZ6 1657 aa26.07■■□□□ 1.76
PNKP-207ENST00000596014 BRWD3Q6RI45 1802 aa26.06■■□□□ 1.76
PNKP-207ENST00000596014 WNK3Q9BYP7 1800 aa26.06■■□□□ 1.76
PNKP-207ENST00000596014 USHBP1Q8N6Y0 703 aa26.05■■□□□ 1.76
PNKP-207ENST00000596014 EYA1Q99502 592 aa26.05■■□□□ 1.76
PNKP-207ENST00000596014 CDCA7Q9BWT1 371 aaPredicted RBP26.04■■□□□ 1.76
PNKP-207ENST00000596014 PRKRIP1Q9H875 184 aaPredicted RBP26.04■■□□□ 1.76
PNKP-207ENST00000596014 IL13P35225 146 aa26.03■■□□□ 1.76
PNKP-207ENST00000596014 DISP2A7MBM2 1401 aa26.03■■□□□ 1.76
PNKP-207ENST00000596014 IL2RBP14784 551 aa26.02■■□□□ 1.76
PNKP-207ENST00000596014 PARP4Q9UKK3 1724 aaKnown RBP26.02■■□□□ 1.76
PNKP-207ENST00000596014 DIAPH1O60610 1272 aaKnown RBP26.01■■□□□ 1.75
PNKP-207ENST00000596014 COL3A1P02461 1466 aaPredicted RBP26■■□□□ 1.75
PNKP-207ENST00000596014 CFAP53Q96M91 514 aa26■■□□□ 1.75
PNKP-207ENST00000596014 NCAPD2Q15021 1401 aa26■■□□□ 1.75
PNKP-207ENST00000596014 MYBBP1AQ9BQG0 1328 aaKnown RBP25.99■■□□□ 1.75
PNKP-207ENST00000596014 IGSF1Q8N6C5 1336 aa25.98■■□□□ 1.75
PNKP-207ENST00000596014 DDB1Q16531 1140 aa25.98■■□□□ 1.75
PNKP-207ENST00000596014 KRT27Q7Z3Y8 459 aa25.98■■□□□ 1.75
PNKP-207ENST00000596014 RGPD1P0DJD0 1748 aa25.97■■□□□ 1.75
PNKP-207ENST00000596014 LRRC37A3O60309 1634 aa25.97■■□□□ 1.75
PNKP-207ENST00000596014 EXOC5O00471 708 aa25.96■■□□□ 1.75
PNKP-207ENST00000596014 PDE3BQ13370 1112 aa25.96■■□□□ 1.75
PNKP-207ENST00000596014 RAPGEF4Q8WZA2 1011 aa25.96■■□□□ 1.75
PNKP-207ENST00000596014 EP400Q96L91 3159 aa25.96■■□□□ 1.75
PNKP-207ENST00000596014 MEGF6O75095 1541 aa25.95■■□□□ 1.74
PNKP-207ENST00000596014 ANP32CO43423 234 aa25.93■■□□□ 1.74
PNKP-207ENST00000596014 TATP17735 454 aaPredicted RBP25.93■■□□□ 1.74
PNKP-207ENST00000596014 SULT6B1Q6IMI4 303 aa25.93■■□□□ 1.74
PNKP-207ENST00000596014 AEBP1Q8IUX7 1158 aa25.92■■□□□ 1.74
PNKP-207ENST00000596014 OVOS2A0A0G2JMS6 1433 aa25.91■■□□□ 1.74
PNKP-207ENST00000596014 TNS2Q63HR2 1409 aa25.91■■□□□ 1.74
PNKP-207ENST00000596014 U2SURPO15042 1029 aaKnown RBP25.9■■□□□ 1.74
PNKP-207ENST00000596014 FAM182BQ5T319 152 aa25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms