RNA–Protein interactions for RNA: ENST00000591650.1

AP3D1-211, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 1 (best)

Gene AP3D1, Length 1,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-211ENST00000591650 NGLY1Q96IV0 654 aa23.46■■□□□ 1.35
AP3D1-211ENST00000591650 POLKQ9UBT6 870 aa23.46■■□□□ 1.35
AP3D1-211ENST00000591650 SLIT2O94813 1529 aa23.46■■□□□ 1.35
AP3D1-211ENST00000591650 FLT4P35916 1363 aa23.45■■□□□ 1.34
AP3D1-211ENST00000591650 PPP2R1AP30153 589 aa23.44■■□□□ 1.34
AP3D1-211ENST00000591650 RALBP1Q15311 655 aa23.44■■□□□ 1.34
AP3D1-211ENST00000591650 RGS17Q9UGC6 210 aaPredicted RBP23.44■■□□□ 1.34
AP3D1-211ENST00000591650 COL5A2P05997 1499 aaPredicted RBP23.43■■□□□ 1.34
AP3D1-211ENST00000591650 AFF2P51816 1311 aa23.43■■□□□ 1.34
AP3D1-211ENST00000591650 RGPD2P0DJD1 1756 aa23.43■■□□□ 1.34
AP3D1-211ENST00000591650 DIEXFQ68CQ4 756 aaKnown RBP23.42■■□□□ 1.34
AP3D1-211ENST00000591650 FNBP4Q8N3X1 1017 aaPredicted RBP23.42■■□□□ 1.34
AP3D1-211ENST00000591650 FAM208AQ9UK61 1670 aaKnown RBP23.42■■□□□ 1.34
AP3D1-211ENST00000591650 KIF24Q5T7B8 1368 aa23.42■■□□□ 1.34
AP3D1-211ENST00000591650 COL3A1P02461 1466 aaPredicted RBP23.42■■□□□ 1.34
AP3D1-211ENST00000591650 BLMP54132 1417 aaPredicted RBP23.42■■□□□ 1.34
AP3D1-211ENST00000591650 HOXC9P31274 260 aa23.42■■□□□ 1.34
AP3D1-211ENST00000591650 PPM1GO15355 546 aaPredicted RBP23.41■■□□□ 1.34
AP3D1-211ENST00000591650 AMPHP49418 695 aa23.41■■□□□ 1.34
AP3D1-211ENST00000591650 AXIN2Q9Y2T1 843 aa23.41■■□□□ 1.34
AP3D1-211ENST00000591650 MYBBP1AQ9BQG0 1328 aaKnown RBP23.4■■□□□ 1.34
AP3D1-211ENST00000591650 ANP32CO43423 234 aa23.4■■□□□ 1.34
AP3D1-211ENST00000591650 IP6K1Q92551 441 aa23.4■■□□□ 1.34
AP3D1-211ENST00000591650 PHF23Q9BUL5 403 aaPredicted RBP23.4■■□□□ 1.34
AP3D1-211ENST00000591650 BCL9LQ86UU0 1499 aa23.4■■□□□ 1.34
AP3D1-211ENST00000591650 MTHFSP49914 203 aa23.39■■□□□ 1.33
AP3D1-211ENST00000591650 BTG4Q9NY30 223 aa23.39■■□□□ 1.33
AP3D1-211ENST00000591650 INSRP06213 1382 aa23.37■■□□□ 1.33
AP3D1-211ENST00000591650 HSP90AB2PQ58FF8 381 aa23.37■■□□□ 1.33
AP3D1-211ENST00000591650 USP21Q9UK80 565 aa23.37■■□□□ 1.33
AP3D1-211ENST00000591650 RGPD1P0DJD0 1748 aa23.36■■□□□ 1.33
AP3D1-211ENST00000591650 ERBB3P21860 1342 aa23.35■■□□□ 1.33
AP3D1-211ENST00000591650 WNK3Q9BYP7 1800 aa23.35■■□□□ 1.33
AP3D1-211ENST00000591650 UNC5CLQ8IV45 518 aa23.34■■□□□ 1.33
AP3D1-211ENST00000591650 POTEAQ6S8J7 498 aa23.33■■□□□ 1.33
AP3D1-211ENST00000591650 ZNF772Q68DY9 489 aaPredicted RBP23.33■■□□□ 1.32
AP3D1-211ENST00000591650 ANKRD24Q8TF21 1146 aa23.33■■□□□ 1.32
AP3D1-211ENST00000591650 LTV1Q96GA3 475 aaPredicted RBP23.33■■□□□ 1.32
AP3D1-211ENST00000591650 STRN4Q9NRL3 753 aa23.32■■□□□ 1.32
AP3D1-211ENST00000591650 EIF4A2Q14240 407 aaKnown RBP23.3■■□□□ 1.32
AP3D1-211ENST00000591650 QTRT2Q9H974 415 aaKnown RBP23.3■■□□□ 1.32
AP3D1-211ENST00000591650 WDR17Q8IZU2 1322 aa23.3■■□□□ 1.32
AP3D1-211ENST00000591650 ATRNO75882 1429 aa23.3■■□□□ 1.32
AP3D1-211ENST00000591650 GLI3P10071 1580 aa23.29■■□□□ 1.32
AP3D1-211ENST00000591650 LARP1Q6PKG0 1096 aaKnown RBP23.29■■□□□ 1.32
AP3D1-211ENST00000591650 CRB1P82279 1406 aa23.28■■□□□ 1.32
AP3D1-211ENST00000591650 TRPC5Q9UL62 973 aaPredicted RBP23.27■■□□□ 1.32
AP3D1-211ENST00000591650 CSB-PGBD3P0DP91 1061 aa23.26■■□□□ 1.31
AP3D1-211ENST00000591650 VPS72Q15906 364 aa23.26■■□□□ 1.31
AP3D1-211ENST00000591650 CFAP53Q96M91 514 aa23.26■■□□□ 1.31
AP3D1-211ENST00000591650 NCAPD2Q15021 1401 aa23.26■■□□□ 1.31
AP3D1-211ENST00000591650 IL13P35225 146 aa23.25■■□□□ 1.31
AP3D1-211ENST00000591650 EVA1CP58658 441 aa23.25■■□□□ 1.31
AP3D1-211ENST00000591650 CCDC184Q52MB2 194 aa23.25■■□□□ 1.31
AP3D1-211ENST00000591650 DIAPH1O60610 1272 aaKnown RBP23.24■■□□□ 1.31
AP3D1-211ENST00000591650 TOM1L2Q6ZVM7 507 aa23.23■■□□□ 1.31
AP3D1-211ENST00000591650 MIER1Q8N108 512 aa23.23■■□□□ 1.31
AP3D1-211ENST00000591650 GJD4Q96KN9 370 aaPredicted RBP23.23■■□□□ 1.31
AP3D1-211ENST00000591650 NLRP2Q9NX02 1062 aa23.23■■□□□ 1.31
AP3D1-211ENST00000591650 SPATA31A5Q5VU36 1347 aa23.22■■□□□ 1.31
AP3D1-211ENST00000591650 SPATA31A7Q8IWB4 1347 aa23.22■■□□□ 1.31
AP3D1-211ENST00000591650 PARP4Q9UKK3 1724 aaKnown RBP23.22■■□□□ 1.31
AP3D1-211ENST00000591650 NBPF6Q5VWK0 638 aa23.22■■□□□ 1.31
AP3D1-211ENST00000591650 USHBP1Q8N6Y0 703 aa23.22■■□□□ 1.31
AP3D1-211ENST00000591650 NBPF4Q96M43 638 aa23.22■■□□□ 1.31
AP3D1-211ENST00000591650 IGSF1Q8N6C5 1336 aa23.21■■□□□ 1.31
AP3D1-211ENST00000591650 CCDC9Q9Y3X0 531 aaKnown RBP23.21■■□□□ 1.31
AP3D1-211ENST00000591650 THSD7AQ9UPZ6 1657 aa23.2■■□□□ 1.31
AP3D1-211ENST00000591650 SPATA31A1Q5TZJ5 1347 aa23.2■■□□□ 1.31
AP3D1-211ENST00000591650 ILDR2Q71H61 639 aa23.2■■□□□ 1.3
AP3D1-211ENST00000591650 EYA1Q99502 592 aa23.2■■□□□ 1.3
AP3D1-211ENST00000591650 RBM6P78332 1123 aaKnown RBP23.19■■□□□ 1.3
AP3D1-211ENST00000591650 CARD10Q9BWT7 1032 aa23.19■■□□□ 1.3
AP3D1-211ENST00000591650 USP35Q9P2H5 1018 aa23.19■■□□□ 1.3
AP3D1-211ENST00000591650 LRRC37A3O60309 1634 aa23.19■■□□□ 1.3
AP3D1-211ENST00000591650 RXRBP28702 533 aa23.18■■□□□ 1.3
AP3D1-211ENST00000591650 MEGF6O75095 1541 aa23.18■■□□□ 1.3
AP3D1-211ENST00000591650 DISP2A7MBM2 1401 aa23.18■■□□□ 1.3
AP3D1-211ENST00000591650 MRS2Q9HD23 443 aa23.17■■□□□ 1.3
AP3D1-211ENST00000591650 SHANK3Q9BYB0 1731 aa23.17■■□□□ 1.3
AP3D1-211ENST00000591650 U2SURPO15042 1029 aaKnown RBP23.16■■□□□ 1.3
AP3D1-211ENST00000591650 AEBP1Q8IUX7 1158 aa23.16■■□□□ 1.3
AP3D1-211ENST00000591650 KDRP35968 1356 aa23.16■■□□□ 1.3
AP3D1-211ENST00000591650 PKD1L3Q7Z443 1732 aa23.16■■□□□ 1.3
AP3D1-211ENST00000591650 TCP11L2Q8N4U5 519 aa23.14■■□□□ 1.29
AP3D1-211ENST00000591650 HMOX1P09601 288 aa23.13■■□□□ 1.29
AP3D1-211ENST00000591650 FAM98CQ17RN3 349 aaKnown RBP23.13■■□□□ 1.29
AP3D1-211ENST00000591650 NUDCQ9Y266 331 aa23.13■■□□□ 1.29
AP3D1-211ENST00000591650 BRWD3Q6RI45 1802 aa23.12■■□□□ 1.29
AP3D1-211ENST00000591650 CCER2I3L3R5 266 aa23.12■■□□□ 1.29
AP3D1-211ENST00000591650 SULT6B1Q6IMI4 303 aa23.12■■□□□ 1.29
AP3D1-211ENST00000591650 OVOS2A0A0G2JMS6 1433 aa23.11■■□□□ 1.29
AP3D1-211ENST00000591650 ONECUT3O60422 494 aaPredicted RBP23.11■■□□□ 1.29
AP3D1-211ENST00000591650 U2AF1L5P0DN76 240 aaPredicted RBP23.11■■□□□ 1.29
AP3D1-211ENST00000591650 U2AF1Q01081 240 aaKnown RBP eCLIP23.11■■□□□ 1.29
AP3D1-211ENST00000591650 RGS12O14924 1447 aa23.1■■□□□ 1.29
AP3D1-211ENST00000591650 THRAP3Q9Y2W1 955 aaKnown RBP23.1■■□□□ 1.29
AP3D1-211ENST00000591650 BARGINQ6ZT62 677 aa23.09■■□□□ 1.29
AP3D1-211ENST00000591650 WDR43Q15061 677 aaKnown RBP eCLIP23.08■■□□□ 1.29
AP3D1-211ENST00000591650 IL2RBP14784 551 aa23.08■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms