RNA–Protein interactions for RNA: ENST00000590898.5

RPRD1A-209, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best) BASIC

Gene RPRD1A, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-209ENST00000590898 ANP32CO43423 234 aa23.07■■□□□ 1.28
RPRD1A-209ENST00000590898 EMILIN1Q9Y6C2 1016 aa23.07■■□□□ 1.28
RPRD1A-209ENST00000590898 PPP2R1AP30153 589 aa23.06■■□□□ 1.28
RPRD1A-209ENST00000590898 FLT4P35916 1363 aa23.06■■□□□ 1.28
RPRD1A-209ENST00000590898 RGPD5Q99666 1765 aa23.06■■□□□ 1.28
RPRD1A-209ENST00000590898 SLIT2O94813 1529 aa23.06■■□□□ 1.28
RPRD1A-209ENST00000590898 ZBTB7CA1YPR0 619 aa23.06■■□□□ 1.28
RPRD1A-209ENST00000590898 HOXC9P31274 260 aa23.06■■□□□ 1.28
RPRD1A-209ENST00000590898 MTHFSP49914 203 aa23.06■■□□□ 1.28
RPRD1A-209ENST00000590898 AXIN2Q9Y2T1 843 aa23.05■■□□□ 1.28
RPRD1A-209ENST00000590898 BLMP54132 1417 aaPredicted RBP23.05■■□□□ 1.28
RPRD1A-209ENST00000590898 BTG4Q9NY30 223 aa23.04■■□□□ 1.28
RPRD1A-209ENST00000590898 PLCH1Q4KWH8 1693 aa23.04■■□□□ 1.28
RPRD1A-209ENST00000590898 CAMTA1Q9Y6Y1 1673 aa23.04■■□□□ 1.28
RPRD1A-209ENST00000590898 PEAK1Q9H792 1746 aa23.03■■□□□ 1.28
RPRD1A-209ENST00000590898 PPM1GO15355 546 aaPredicted RBP23.03■■□□□ 1.28
RPRD1A-209ENST00000590898 MYBBP1AQ9BQG0 1328 aaKnown RBP23.03■■□□□ 1.28
RPRD1A-209ENST00000590898 INSRP06213 1382 aa23.03■■□□□ 1.28
RPRD1A-209ENST00000590898 CDK12Q9NYV4 1490 aaPredicted RBP23.01■■□□□ 1.27
RPRD1A-209ENST00000590898 HSP90AB2PQ58FF8 381 aa23.01■■□□□ 1.27
RPRD1A-209ENST00000590898 UNC5CLQ8IV45 518 aa23.01■■□□□ 1.27
RPRD1A-209ENST00000590898 AFF2P51816 1311 aa23■■□□□ 1.27
RPRD1A-209ENST00000590898 BCL9LQ86UU0 1499 aa23■■□□□ 1.27
RPRD1A-209ENST00000590898 USP21Q9UK80 565 aa23■■□□□ 1.27
RPRD1A-209ENST00000590898 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.99■■□□□ 1.27
RPRD1A-209ENST00000590898 EVA1CP58658 441 aa22.99■■□□□ 1.27
RPRD1A-209ENST00000590898 COL5A2P05997 1499 aaPredicted RBP22.99■■□□□ 1.27
RPRD1A-209ENST00000590898 NRAPQ86VF7 1730 aa22.98■■□□□ 1.27
RPRD1A-209ENST00000590898 ERBB3P21860 1342 aa22.98■■□□□ 1.27
RPRD1A-209ENST00000590898 ZNF772Q68DY9 489 aaPredicted RBP22.96■■□□□ 1.27
RPRD1A-209ENST00000590898 CFAP53Q96M91 514 aa22.96■■□□□ 1.27
RPRD1A-209ENST00000590898 WDR17Q8IZU2 1322 aa22.96■■□□□ 1.27
RPRD1A-209ENST00000590898 ANKRD24Q8TF21 1146 aa22.96■■□□□ 1.27
RPRD1A-209ENST00000590898 STRN4Q9NRL3 753 aa22.94■■□□□ 1.26
RPRD1A-209ENST00000590898 FAM208AQ9UK61 1670 aaKnown RBP22.94■■□□□ 1.26
RPRD1A-209ENST00000590898 VPS72Q15906 364 aa22.94■■□□□ 1.26
RPRD1A-209ENST00000590898 TRPC5Q9UL62 973 aaPredicted RBP22.93■■□□□ 1.26
RPRD1A-209ENST00000590898 DIAPH1O60610 1272 aaKnown RBP22.92■■□□□ 1.26
RPRD1A-209ENST00000590898 CSB-PGBD3P0DP91 1061 aa22.92■■□□□ 1.26
RPRD1A-209ENST00000590898 EIF4A2Q14240 407 aaKnown RBP22.92■■□□□ 1.26
RPRD1A-209ENST00000590898 LARP1Q6PKG0 1096 aaKnown RBP22.92■■□□□ 1.26
RPRD1A-209ENST00000590898 LTV1Q96GA3 475 aaPredicted RBP22.92■■□□□ 1.26
RPRD1A-209ENST00000590898 CRB1P82279 1406 aa22.91■■□□□ 1.26
RPRD1A-209ENST00000590898 PHF23Q9BUL5 403 aaPredicted RBP22.91■■□□□ 1.26
RPRD1A-209ENST00000590898 IL13P35225 146 aa22.9■■□□□ 1.26
RPRD1A-209ENST00000590898 TOM1L2Q6ZVM7 507 aa22.9■■□□□ 1.26
RPRD1A-209ENST00000590898 CARD10Q9BWT7 1032 aa22.9■■□□□ 1.26
RPRD1A-209ENST00000590898 QTRT2Q9H974 415 aaKnown RBP22.9■■□□□ 1.26
RPRD1A-209ENST00000590898 COL3A1P02461 1466 aaPredicted RBP22.9■■□□□ 1.26
RPRD1A-209ENST00000590898 ATRNO75882 1429 aa22.9■■□□□ 1.26
RPRD1A-209ENST00000590898 RGS17Q9UGC6 210 aaPredicted RBP22.89■■□□□ 1.25
RPRD1A-209ENST00000590898 RGPD2P0DJD1 1756 aa22.89■■□□□ 1.25
RPRD1A-209ENST00000590898 SPATA31A5Q5VU36 1347 aa22.89■■□□□ 1.25
RPRD1A-209ENST00000590898 SPATA31A7Q8IWB4 1347 aa22.89■■□□□ 1.25
RPRD1A-209ENST00000590898 NLRP2Q9NX02 1062 aa22.88■■□□□ 1.25
RPRD1A-209ENST00000590898 NBPF6Q5VWK0 638 aa22.87■■□□□ 1.25
RPRD1A-209ENST00000590898 GJD4Q96KN9 370 aaPredicted RBP22.87■■□□□ 1.25
RPRD1A-209ENST00000590898 NBPF4Q96M43 638 aa22.87■■□□□ 1.25
RPRD1A-209ENST00000590898 NUDCQ9Y266 331 aa22.87■■□□□ 1.25
RPRD1A-209ENST00000590898 THRAP3Q9Y2W1 955 aaKnown RBP22.87■■□□□ 1.25
RPRD1A-209ENST00000590898 SPATA31A1Q5TZJ5 1347 aa22.87■■□□□ 1.25
RPRD1A-209ENST00000590898 YTHDC1Q96MU7 727 aaKnown RBP22.86■■□□□ 1.25
RPRD1A-209ENST00000590898 EYA1Q99502 592 aa22.86■■□□□ 1.25
RPRD1A-209ENST00000590898 CCDC9Q9Y3X0 531 aaKnown RBP22.85■■□□□ 1.25
RPRD1A-209ENST00000590898 IGSF1Q8N6C5 1336 aa22.84■■□□□ 1.25
RPRD1A-209ENST00000590898 RGPD1P0DJD0 1748 aa22.84■■□□□ 1.25
RPRD1A-209ENST00000590898 TCP11L2Q8N4U5 519 aa22.84■■□□□ 1.25
RPRD1A-209ENST00000590898 NCAPD2Q15021 1401 aa22.83■■□□□ 1.25
RPRD1A-209ENST00000590898 RBM6P78332 1123 aaKnown RBP22.82■■□□□ 1.24
RPRD1A-209ENST00000590898 BARGINQ6ZT62 677 aa22.82■■□□□ 1.24
RPRD1A-209ENST00000590898 CCER2I3L3R5 266 aa22.82■■□□□ 1.24
RPRD1A-209ENST00000590898 USP35Q9P2H5 1018 aa22.81■■□□□ 1.24
RPRD1A-209ENST00000590898 ONECUT3O60422 494 aaPredicted RBP22.8■■□□□ 1.24
RPRD1A-209ENST00000590898 GLI3P10071 1580 aa22.8■■□□□ 1.24
RPRD1A-209ENST00000590898 POTEAQ6S8J7 498 aa22.8■■□□□ 1.24
RPRD1A-209ENST00000590898 CDCA7Q9BWT1 371 aaPredicted RBP22.8■■□□□ 1.24
RPRD1A-209ENST00000590898 KDRP35968 1356 aa22.79■■□□□ 1.24
RPRD1A-209ENST00000590898 U2SURPO15042 1029 aaKnown RBP22.79■■□□□ 1.24
RPRD1A-209ENST00000590898 CCDC184Q52MB2 194 aa22.79■■□□□ 1.24
RPRD1A-209ENST00000590898 MRS2Q9HD23 443 aa22.79■■□□□ 1.24
RPRD1A-209ENST00000590898 RXRBP28702 533 aa22.78■■□□□ 1.24
RPRD1A-209ENST00000590898 SULT6B1Q6IMI4 303 aa22.77■■□□□ 1.24
RPRD1A-209ENST00000590898 U2AF1L5P0DN76 240 aaPredicted RBP22.76■■□□□ 1.23
RPRD1A-209ENST00000590898 U2AF1Q01081 240 aaKnown RBP eCLIP22.76■■□□□ 1.231e-6■■■□□ 15.4
RPRD1A-209ENST00000590898 USHBP1Q8N6Y0 703 aa22.76■■□□□ 1.23
RPRD1A-209ENST00000590898 PLEKHG2Q9H7P9 1386 aa22.76■■□□□ 1.23
RPRD1A-209ENST00000590898 FCHSD2O94868 740 aa22.76■■□□□ 1.23
RPRD1A-209ENST00000590898 IL2RBP14784 551 aa22.76■■□□□ 1.23
RPRD1A-209ENST00000590898 FAM98CQ17RN3 349 aaKnown RBP22.75■■□□□ 1.23
RPRD1A-209ENST00000590898 RAPGEF4Q8WZA2 1011 aa22.75■■□□□ 1.23
RPRD1A-209ENST00000590898 WNK3Q9BYP7 1800 aa22.75■■□□□ 1.23
RPRD1A-209ENST00000590898 DISP2A7MBM2 1401 aa22.74■■□□□ 1.23
RPRD1A-209ENST00000590898 PNISRQ8TF01 805 aaKnown RBP22.74■■□□□ 1.23
RPRD1A-209ENST00000590898 WDR43Q15061 677 aaKnown RBP eCLIP22.74■■□□□ 1.23
RPRD1A-209ENST00000590898 AEBP1Q8IUX7 1158 aa22.73■■□□□ 1.23
RPRD1A-209ENST00000590898 HMOX1P09601 288 aa22.72■■□□□ 1.23
RPRD1A-209ENST00000590898 TATP17735 454 aaPredicted RBP22.72■■□□□ 1.23
RPRD1A-209ENST00000590898 PNNQ9H307 717 aaKnown RBP22.72■■□□□ 1.23
RPRD1A-209ENST00000590898 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.71■■□□□ 1.232e-7■□□□□ 9.8
RPRD1A-209ENST00000590898 PARP4Q9UKK3 1724 aaKnown RBP22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms