RNA–Protein interactions for RNA: ENST00000586904.1

NCLN-202, Transcript of nicalin, humanhuman

TSL 5

Gene NCLN, Length 836 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-202ENST00000586904 MAP3K19Q56UN5 1328 aa23.09■■□□□ 1.29
NCLN-202ENST00000586904 MAP2P11137 1827 aaKnown RBP23.09■■□□□ 1.29
NCLN-202ENST00000586904 NPC1L1Q9UHC9 1359 aa23.09■■□□□ 1.29
NCLN-202ENST00000586904 COL5A2P05997 1499 aaPredicted RBP23.09■■□□□ 1.29
NCLN-202ENST00000586904 GLI3P10071 1580 aa23.07■■□□□ 1.28
NCLN-202ENST00000586904 RBM6P78332 1123 aaKnown RBP23.07■■□□□ 1.28
NCLN-202ENST00000586904 RRS1Q15050 365 aaKnown RBP23.07■■□□□ 1.28
NCLN-202ENST00000586904 GJD4Q96KN9 370 aaPredicted RBP23.07■■□□□ 1.28
NCLN-202ENST00000586904 RXRBP28702 533 aa23.06■■□□□ 1.28
NCLN-202ENST00000586904 IP6K1Q92551 441 aa23.06■■□□□ 1.28
NCLN-202ENST00000586904 STRN4Q9NRL3 753 aa23.06■■□□□ 1.28
NCLN-202ENST00000586904 PEAK1Q9H792 1746 aa23.05■■□□□ 1.28
NCLN-202ENST00000586904 ZNF316A6NFI3 1004 aaPredicted RBP23.05■■□□□ 1.28
NCLN-202ENST00000586904 EVA1CP58658 441 aa23.05■■□□□ 1.28
NCLN-202ENST00000586904 MORC1Q86VD1 984 aa23.05■■□□□ 1.28
NCLN-202ENST00000586904 RTL1A6NKG5 1358 aa23.04■■□□□ 1.28
NCLN-202ENST00000586904 SPATA31A5Q5VU36 1347 aa23.04■■□□□ 1.28
NCLN-202ENST00000586904 SPATA31A7Q8IWB4 1347 aa23.04■■□□□ 1.28
NCLN-202ENST00000586904 KIF24Q5T7B8 1368 aa23.03■■□□□ 1.28
NCLN-202ENST00000586904 BLMP54132 1417 aaPredicted RBP23.03■■□□□ 1.28
NCLN-202ENST00000586904 HOXC9P31274 260 aa23.03■■□□□ 1.28
NCLN-202ENST00000586904 DDX10Q13206 875 aaKnown RBP23.03■■□□□ 1.28
NCLN-202ENST00000586904 CC2D1BQ5T0F9 858 aaKnown RBP23.03■■□□□ 1.28
NCLN-202ENST00000586904 AMPHP49418 695 aa23.02■■□□□ 1.28
NCLN-202ENST00000586904 LARP1Q6PKG0 1096 aaKnown RBP23.02■■□□□ 1.28
NCLN-202ENST00000586904 ILDR2Q71H61 639 aa23.02■■□□□ 1.28
NCLN-202ENST00000586904 CCDC9Q9Y3X0 531 aaKnown RBP23.02■■□□□ 1.28
NCLN-202ENST00000586904 CDK12Q9NYV4 1490 aaPredicted RBP23.01■■□□□ 1.27
NCLN-202ENST00000586904 TNNT2P45379 298 aaPredicted RBP23.01■■□□□ 1.27
NCLN-202ENST00000586904 POLKQ9UBT6 870 aa23.01■■□□□ 1.27
NCLN-202ENST00000586904 EMILIN1Q9Y6C2 1016 aa23.01■■□□□ 1.27
NCLN-202ENST00000586904 SPATA31A1Q5TZJ5 1347 aa23.01■■□□□ 1.27
NCLN-202ENST00000586904 WDR17Q8IZU2 1322 aa23.01■■□□□ 1.27
NCLN-202ENST00000586904 ERBB3P21860 1342 aa23■■□□□ 1.27
NCLN-202ENST00000586904 FLT4P35916 1363 aa23■■□□□ 1.27
NCLN-202ENST00000586904 CRB1P82279 1406 aa22.99■■□□□ 1.27
NCLN-202ENST00000586904 SMG6Q86US8 1419 aaKnown RBP22.98■■□□□ 1.27
NCLN-202ENST00000586904 ANKRD24Q8TF21 1146 aa22.97■■□□□ 1.27
NCLN-202ENST00000586904 INSRP06213 1382 aa22.97■■□□□ 1.27
NCLN-202ENST00000586904 RGS12O14924 1447 aa22.97■■□□□ 1.27
NCLN-202ENST00000586904 FAM208AQ9UK61 1670 aaKnown RBP22.97■■□□□ 1.27
NCLN-202ENST00000586904 ONECUT3O60422 494 aaPredicted RBP22.96■■□□□ 1.27
NCLN-202ENST00000586904 HSP90AB2PQ58FF8 381 aa22.96■■□□□ 1.27
NCLN-202ENST00000586904 TOM1L2Q6ZVM7 507 aa22.96■■□□□ 1.27
NCLN-202ENST00000586904 CSB-PGBD3P0DP91 1061 aa22.95■■□□□ 1.26
NCLN-202ENST00000586904 RGPD2P0DJD1 1756 aa22.94■■□□□ 1.26
NCLN-202ENST00000586904 CNGB1Q14028 1251 aaPredicted RBP22.94■■□□□ 1.26
NCLN-202ENST00000586904 TCP11L2Q8N4U5 519 aa22.94■■□□□ 1.26
NCLN-202ENST00000586904 CARD10Q9BWT7 1032 aa22.94■■□□□ 1.26
NCLN-202ENST00000586904 PPM1GO15355 546 aaPredicted RBP22.93■■□□□ 1.26
NCLN-202ENST00000586904 BARGINQ6ZT62 677 aa22.93■■□□□ 1.26
NCLN-202ENST00000586904 LTV1Q96GA3 475 aaPredicted RBP22.93■■□□□ 1.26
NCLN-202ENST00000586904 USP35Q9P2H5 1018 aa22.93■■□□□ 1.26
NCLN-202ENST00000586904 THRAP3Q9Y2W1 955 aaKnown RBP22.93■■□□□ 1.26
NCLN-202ENST00000586904 THSD7AQ9UPZ6 1657 aa22.93■■□□□ 1.26
NCLN-202ENST00000586904 FAM98CQ17RN3 349 aaKnown RBP22.92■■□□□ 1.26
NCLN-202ENST00000586904 WNK3Q9BYP7 1800 aa22.92■■□□□ 1.26
NCLN-202ENST00000586904 BRWD3Q6RI45 1802 aa22.9■■□□□ 1.26
NCLN-202ENST00000586904 NLRP2Q9NX02 1062 aa22.9■■□□□ 1.26
NCLN-202ENST00000586904 SEPT12Q8IYM1 358 aa22.89■■□□□ 1.25
NCLN-202ENST00000586904 PARD3Q8TEW0 1356 aa22.89■■□□□ 1.25
NCLN-202ENST00000586904 MTHFSP49914 203 aa22.88■■□□□ 1.25
NCLN-202ENST00000586904 PARP4Q9UKK3 1724 aaKnown RBP22.86■■□□□ 1.25
NCLN-202ENST00000586904 DISP2A7MBM2 1401 aa22.86■■□□□ 1.25
NCLN-202ENST00000586904 EIF4A2Q14240 407 aaKnown RBP22.85■■□□□ 1.25
NCLN-202ENST00000586904 NBPF6Q5VWK0 638 aa22.85■■□□□ 1.25
NCLN-202ENST00000586904 NBPF4Q96M43 638 aa22.85■■□□□ 1.25
NCLN-202ENST00000586904 PPP2R1AP30153 589 aa22.84■■□□□ 1.25
NCLN-202ENST00000586904 A0A0G2JS52 829 aa22.83■■□□□ 1.25
NCLN-202ENST00000586904 MYT1Q01538 1121 aa22.83■■□□□ 1.25
NCLN-202ENST00000586904 CDCA7Q9BWT1 371 aaPredicted RBP22.83■■□□□ 1.25
NCLN-202ENST00000586904 NCAPD2Q15021 1401 aa22.82■■□□□ 1.24
NCLN-202ENST00000586904 LRRC37A3O60309 1634 aa22.82■■□□□ 1.24
NCLN-202ENST00000586904 RALBP1Q15311 655 aa22.81■■□□□ 1.24
NCLN-202ENST00000586904 EYA1Q99502 592 aa22.8■■□□□ 1.24
NCLN-202ENST00000586904 COL3A1P02461 1466 aaPredicted RBP22.79■■□□□ 1.24
NCLN-202ENST00000586904 IL2RBP14784 551 aa22.79■■□□□ 1.24
NCLN-202ENST00000586904 USHBP1Q8N6Y0 703 aa22.79■■□□□ 1.24
NCLN-202ENST00000586904 RGPD1P0DJD0 1748 aa22.79■■□□□ 1.24
NCLN-202ENST00000586904 IL13P35225 146 aa22.78■■□□□ 1.24
NCLN-202ENST00000586904 KRT27Q7Z3Y8 459 aa22.78■■□□□ 1.24
NCLN-202ENST00000586904 IGSF1Q8N6C5 1336 aa22.77■■□□□ 1.24
NCLN-202ENST00000586904 DDB1Q16531 1140 aa22.76■■□□□ 1.23
NCLN-202ENST00000586904 MEGF6O75095 1541 aa22.76■■□□□ 1.23
NCLN-202ENST00000586904 PRKRIP1Q9H875 184 aaPredicted RBP22.75■■□□□ 1.23
NCLN-202ENST00000586904 TNS2Q63HR2 1409 aa22.74■■□□□ 1.23
NCLN-202ENST00000586904 DIAPH1O60610 1272 aaKnown RBP22.74■■□□□ 1.23
NCLN-202ENST00000586904 EXOC5O00471 708 aa22.73■■□□□ 1.23
NCLN-202ENST00000586904 PDE3BQ13370 1112 aa22.73■■□□□ 1.23
NCLN-202ENST00000586904 CFAP53Q96M91 514 aa22.73■■□□□ 1.23
NCLN-202ENST00000586904 OVOS2A0A0G2JMS6 1433 aa22.73■■□□□ 1.23
NCLN-202ENST00000586904 RAPGEF4Q8WZA2 1011 aa22.72■■□□□ 1.23
NCLN-202ENST00000586904 SHANK3Q9BYB0 1731 aa22.71■■□□□ 1.23
NCLN-202ENST00000586904 MYBBP1AQ9BQG0 1328 aaKnown RBP22.71■■□□□ 1.23
NCLN-202ENST00000586904 TATP17735 454 aaPredicted RBP22.7■■□□□ 1.22
NCLN-202ENST00000586904 PKD1L3Q7Z443 1732 aa22.69■■□□□ 1.22
NCLN-202ENST00000586904 KDRP35968 1356 aa22.69■■□□□ 1.22
NCLN-202ENST00000586904 FAM182BQ5T319 152 aa22.69■■□□□ 1.22
NCLN-202ENST00000586904 SOCS7O14512 581 aa22.68■■□□□ 1.22
NCLN-202ENST00000586904 AEBP1Q8IUX7 1158 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms