RNA–Protein interactions for RNA: ENST00000585894.5

RETREG3-203, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 1 (best) BASIC

Gene RETREG3, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-203ENST00000585894 KNSTRNQ9Y448 316 aa17.33■□□□□ 0.37
RETREG3-203ENST00000585894 MAP2P11137 1827 aaKnown RBP17.33■□□□□ 0.36
RETREG3-203ENST00000585894 COL5A2P05997 1499 aaPredicted RBP17.33■□□□□ 0.36
RETREG3-203ENST00000585894 MAP3K19Q56UN5 1328 aa17.33■□□□□ 0.36
RETREG3-203ENST00000585894 PER1O15534 1290 aaPredicted RBP17.33■□□□□ 0.36
RETREG3-203ENST00000585894 RXRBP28702 533 aa17.33■□□□□ 0.36
RETREG3-203ENST00000585894 TNNT2P45379 298 aaPredicted RBP17.33■□□□□ 0.36
RETREG3-203ENST00000585894 PEAK1Q9H792 1746 aa17.32■□□□□ 0.36
RETREG3-203ENST00000585894 VPS72Q15906 364 aa17.31■□□□□ 0.36
RETREG3-203ENST00000585894 AMER1Q5JTC6 1135 aaPredicted RBP17.31■□□□□ 0.36
RETREG3-203ENST00000585894 LARP1Q6PKG0 1096 aaKnown RBP17.31■□□□□ 0.36
RETREG3-203ENST00000585894 GJD4Q96KN9 370 aaPredicted RBP17.31■□□□□ 0.36
RETREG3-203ENST00000585894 EVA1CP58658 441 aa17.3■□□□□ 0.36
RETREG3-203ENST00000585894 RBM6P78332 1123 aaKnown RBP17.3■□□□□ 0.36
RETREG3-203ENST00000585894 CC2D1BQ5T0F9 858 aaKnown RBP17.3■□□□□ 0.36
RETREG3-203ENST00000585894 RGS12O14924 1447 aa17.29■□□□□ 0.36
RETREG3-203ENST00000585894 USP35Q9P2H5 1018 aa17.29■□□□□ 0.36
RETREG3-203ENST00000585894 ABCC6O95255 1503 aa17.28■□□□□ 0.36
RETREG3-203ENST00000585894 EMILIN1Q9Y6C2 1016 aa17.28■□□□□ 0.36
RETREG3-203ENST00000585894 NSD2O96028 1365 aa17.28■□□□□ 0.36
RETREG3-203ENST00000585894 RGPD2P0DJD1 1756 aa17.28■□□□□ 0.36
RETREG3-203ENST00000585894 SPATA31A5Q5VU36 1347 aa17.28■□□□□ 0.36
RETREG3-203ENST00000585894 SPATA31A7Q8IWB4 1347 aa17.28■□□□□ 0.36
RETREG3-203ENST00000585894 BRWD3Q6RI45 1802 aa17.27■□□□□ 0.35
RETREG3-203ENST00000585894 AMPHP49418 695 aa17.27■□□□□ 0.35
RETREG3-203ENST00000585894 MORC1Q86VD1 984 aa17.27■□□□□ 0.35
RETREG3-203ENST00000585894 LTV1Q96GA3 475 aaPredicted RBP17.27■□□□□ 0.35
RETREG3-203ENST00000585894 HOXC9P31274 260 aa17.26■□□□□ 0.35
RETREG3-203ENST00000585894 DDX10Q13206 875 aaKnown RBP17.26■□□□□ 0.35
RETREG3-203ENST00000585894 SPATA31A1Q5TZJ5 1347 aa17.25■□□□□ 0.35
RETREG3-203ENST00000585894 PPM1GO15355 546 aaPredicted RBP17.25■□□□□ 0.35
RETREG3-203ENST00000585894 CSB-PGBD3P0DP91 1061 aa17.25■□□□□ 0.35
RETREG3-203ENST00000585894 FAM98CQ17RN3 349 aaKnown RBP17.25■□□□□ 0.35
RETREG3-203ENST00000585894 IP6K1Q92551 441 aa17.25■□□□□ 0.35
RETREG3-203ENST00000585894 WDR17Q8IZU2 1322 aa17.25■□□□□ 0.35
RETREG3-203ENST00000585894 CRB1P82279 1406 aa17.24■□□□□ 0.35
RETREG3-203ENST00000585894 ERBB3P21860 1342 aa17.24■□□□□ 0.35
RETREG3-203ENST00000585894 CDK12Q9NYV4 1490 aaPredicted RBP17.24■□□□□ 0.35
RETREG3-203ENST00000585894 WNK3Q9BYP7 1800 aa17.24■□□□□ 0.35
RETREG3-203ENST00000585894 TOM1L2Q6ZVM7 507 aa17.24■□□□□ 0.35
RETREG3-203ENST00000585894 ANKRD24Q8TF21 1146 aa17.24■□□□□ 0.35
RETREG3-203ENST00000585894 POLKQ9UBT6 870 aa17.24■□□□□ 0.35
RETREG3-203ENST00000585894 BLMP54132 1417 aaPredicted RBP17.23■□□□□ 0.35
RETREG3-203ENST00000585894 HSP90AB2PQ58FF8 381 aa17.23■□□□□ 0.35
RETREG3-203ENST00000585894 RTL1A6NKG5 1358 aa17.22■□□□□ 0.35
RETREG3-203ENST00000585894 THSD7AQ9UPZ6 1657 aa17.22■□□□□ 0.35
RETREG3-203ENST00000585894 A0A0G2JS52 829 aa17.22■□□□□ 0.35
RETREG3-203ENST00000585894 MYT1Q01538 1121 aa17.22■□□□□ 0.35
RETREG3-203ENST00000585894 FLT4P35916 1363 aa17.22■□□□□ 0.35
RETREG3-203ENST00000585894 SEPT12Q8IYM1 358 aa17.21■□□□□ 0.35
RETREG3-203ENST00000585894 NLRP2Q9NX02 1062 aa17.21■□□□□ 0.35
RETREG3-203ENST00000585894 FAM208AQ9UK61 1670 aaKnown RBP17.21■□□□□ 0.34
RETREG3-203ENST00000585894 ZNF316A6NFI3 1004 aaPredicted RBP17.2■□□□□ 0.34
RETREG3-203ENST00000585894 TCP11L2Q8N4U5 519 aa17.2■□□□□ 0.34
RETREG3-203ENST00000585894 NPC1L1Q9UHC9 1359 aa17.2■□□□□ 0.34
RETREG3-203ENST00000585894 INSRP06213 1382 aa17.18■□□□□ 0.34
RETREG3-203ENST00000585894 ONECUT3O60422 494 aaPredicted RBP17.18■□□□□ 0.34
RETREG3-203ENST00000585894 SMG6Q86US8 1419 aaKnown RBP17.17■□□□□ 0.34
RETREG3-203ENST00000585894 USHBP1Q8N6Y0 703 aa17.17■□□□□ 0.34
RETREG3-203ENST00000585894 CARD10Q9BWT7 1032 aa17.17■□□□□ 0.34
RETREG3-203ENST00000585894 KIF24Q5T7B8 1368 aa17.17■□□□□ 0.34
RETREG3-203ENST00000585894 EP400Q96L91 3159 aa17.17■□□□□ 0.34
RETREG3-203ENST00000585894 LRRC37A3O60309 1634 aa17.16■□□□□ 0.34
RETREG3-203ENST00000585894 PARP4Q9UKK3 1724 aaKnown RBP17.16■□□□□ 0.34
RETREG3-203ENST00000585894 BARGINQ6ZT62 677 aa17.16■□□□□ 0.34
RETREG3-203ENST00000585894 NBPF6Q5VWK0 638 aa17.15■□□□□ 0.34
RETREG3-203ENST00000585894 NBPF4Q96M43 638 aa17.15■□□□□ 0.34
RETREG3-203ENST00000585894 MTHFSP49914 203 aa17.14■□□□□ 0.33
RETREG3-203ENST00000585894 FAM182BQ5T319 152 aa17.14■□□□□ 0.33
RETREG3-203ENST00000585894 THRAP3Q9Y2W1 955 aaKnown RBP17.14■□□□□ 0.33
RETREG3-203ENST00000585894 DISP2A7MBM2 1401 aa17.13■□□□□ 0.33
RETREG3-203ENST00000585894 EIF4A2Q14240 407 aaKnown RBP17.13■□□□□ 0.33
RETREG3-203ENST00000585894 KRT27Q7Z3Y8 459 aa17.11■□□□□ 0.33
RETREG3-203ENST00000585894 PARD3Q8TEW0 1356 aa17.1■□□□□ 0.33
RETREG3-203ENST00000585894 MEGF6O75095 1541 aa17.1■□□□□ 0.33
RETREG3-203ENST00000585894 PPP2R1AP30153 589 aa17.1■□□□□ 0.33
RETREG3-203ENST00000585894 EYA1Q99502 592 aa17.1■□□□□ 0.33
RETREG3-203ENST00000585894 IL2RBP14784 551 aa17.08■□□□□ 0.32
RETREG3-203ENST00000585894 DDB1Q16531 1140 aa17.08■□□□□ 0.32
RETREG3-203ENST00000585894 COL3A1P02461 1466 aaPredicted RBP17.08■□□□□ 0.32
RETREG3-203ENST00000585894 RGPD1P0DJD0 1748 aa17.08■□□□□ 0.32
RETREG3-203ENST00000585894 SHANK3Q9BYB0 1731 aa17.08■□□□□ 0.32
RETREG3-203ENST00000585894 SOCS7O14512 581 aa17.07■□□□□ 0.32
RETREG3-203ENST00000585894 PDE3BQ13370 1112 aa17.07■□□□□ 0.32
RETREG3-203ENST00000585894 NCAPD2Q15021 1401 aa17.06■□□□□ 0.32
RETREG3-203ENST00000585894 TNS2Q63HR2 1409 aa17.06■□□□□ 0.32
RETREG3-203ENST00000585894 IL13P35225 146 aa17.05■□□□□ 0.32
RETREG3-203ENST00000585894 CDCA7Q9BWT1 371 aaPredicted RBP17.05■□□□□ 0.32
RETREG3-203ENST00000585894 AEBP1Q8IUX7 1158 aa17.04■□□□□ 0.32
RETREG3-203ENST00000585894 EXOC5O00471 708 aa17.04■□□□□ 0.32
RETREG3-203ENST00000585894 MARCH10Q8NA82 808 aaPredicted RBP17.04■□□□□ 0.32
RETREG3-203ENST00000585894 IGSF1Q8N6C5 1336 aa17.03■□□□□ 0.32
RETREG3-203ENST00000585894 RAPGEF4Q8WZA2 1011 aa17.03■□□□□ 0.32
RETREG3-203ENST00000585894 UPF1Q92900 1129 aaKnown RBP eCLIP17.03■□□□□ 0.322e-11■■■■■ 29.3
RETREG3-203ENST00000585894 OVOS2A0A0G2JMS6 1433 aa17.03■□□□□ 0.32
RETREG3-203ENST00000585894 DIAPH1O60610 1272 aaKnown RBP17.02■□□□□ 0.32
RETREG3-203ENST00000585894 SBF2Q86WG5 1849 aa17.02■□□□□ 0.32
RETREG3-203ENST00000585894 PKD1L3Q7Z443 1732 aa17.01■□□□□ 0.31
RETREG3-203ENST00000585894 KAT6BQ8WYB5 2073 aa17.01■□□□□ 0.31
RETREG3-203ENST00000585894 TATP17735 454 aaPredicted RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms