RNA–Protein interactions for RNA: ENST00000584450.5

ERBB2-218, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-218ENST00000584450 GOLGA6L4A6NEF3 574 aa14.63□□□□□ -0.07
ERBB2-218ENST00000584450 CHD1O14646 1710 aa14.63□□□□□ -0.07
ERBB2-218ENST00000584450 PREX2Q70Z35 1606 aa14.63□□□□□ -0.07
ERBB2-218ENST00000584450 GNAI2P04899 355 aa14.63□□□□□ -0.07
ERBB2-218ENST00000584450 THEMISQ8N1K5 641 aaPredicted RBP14.63□□□□□ -0.07
ERBB2-218ENST00000584450 MEIS3Q99687 375 aa14.63□□□□□ -0.07
ERBB2-218ENST00000584450 ZC3H6P61129 1189 aaKnown RBP14.62□□□□□ -0.07
ERBB2-218ENST00000584450 NPC1L1Q9UHC9 1359 aa14.62□□□□□ -0.07
ERBB2-218ENST00000584450 MSNP26038 577 aaKnown RBP14.62□□□□□ -0.07
ERBB2-218ENST00000584450 ABCC11Q96J66 1382 aa14.62□□□□□ -0.07
ERBB2-218ENST00000584450 EIF4A2Q14240 407 aaKnown RBP14.62□□□□□ -0.07
ERBB2-218ENST00000584450 YEATS2Q9ULM3 1422 aa14.61□□□□□ -0.07
ERBB2-218ENST00000584450 DIAPH3Q9NSV4 1193 aa14.61□□□□□ -0.07
ERBB2-218ENST00000584450 NSD2O96028 1365 aa14.61□□□□□ -0.07
ERBB2-218ENST00000584450 ZNF530Q6P9A1 599 aaPredicted RBP14.61□□□□□ -0.07
ERBB2-218ENST00000584450 TBC1D9Q6ZT07 1266 aa14.61□□□□□ -0.07
ERBB2-218ENST00000584450 RSPH6AQ9H0K4 717 aa14.61□□□□□ -0.07
ERBB2-218ENST00000584450 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.61□□□□□ -0.07
ERBB2-218ENST00000584450 ZBTB40Q9NUA8 1239 aa14.61□□□□□ -0.07
ERBB2-218ENST00000584450 NUTM1Q86Y26 1132 aa14.6□□□□□ -0.07
ERBB2-218ENST00000584450 TRMT2AQ8IZ69 625 aaKnown RBP14.6□□□□□ -0.07
ERBB2-218ENST00000584450 YTHDC2Q9H6S0 1430 aaKnown RBP14.6□□□□□ -0.07
ERBB2-218ENST00000584450 PPIP5K1Q6PFW1 1433 aa14.6□□□□□ -0.07
ERBB2-218ENST00000584450 GNAI3P08754 354 aa14.59□□□□□ -0.07
ERBB2-218ENST00000584450 IFIT2P09913 472 aaKnown RBP14.59□□□□□ -0.07
ERBB2-218ENST00000584450 ANO8Q9HCE9 1232 aaPredicted RBP14.59□□□□□ -0.07
ERBB2-218ENST00000584450 MRPL50Q8N5N7 158 aaKnown RBP14.59□□□□□ -0.07
ERBB2-218ENST00000584450 RNF214Q8ND24 703 aa14.59□□□□□ -0.07
ERBB2-218ENST00000584450 UPF3BQ9BZI7 483 aaKnown RBP14.59□□□□□ -0.07
ERBB2-218ENST00000584450 SIL1Q9H173 461 aa14.59□□□□□ -0.07
ERBB2-218ENST00000584450 CAVIN1Q6NZI2 390 aaKnown RBP14.59□□□□□ -0.07
ERBB2-218ENST00000584450 DDX54Q8TDD1 881 aaKnown RBP14.59□□□□□ -0.07
ERBB2-218ENST00000584450 TTC21BQ7Z4L5 1316 aa14.59□□□□□ -0.07
ERBB2-218ENST00000584450 ABCC1P33527 1531 aa14.59□□□□□ -0.07
ERBB2-218ENST00000584450 LARP6Q9BRS8 491 aaKnown RBP14.58□□□□□ -0.07
ERBB2-218ENST00000584450 K7ELQ4 463 aaPredicted RBP14.58□□□□□ -0.08
ERBB2-218ENST00000584450 PRPF40AO75400 957 aaKnown RBP14.58□□□□□ -0.08
ERBB2-218ENST00000584450 CDC42BPBQ9Y5S2 1711 aa14.58□□□□□ -0.08
ERBB2-218ENST00000584450 SRGAP3O43295 1099 aa14.58□□□□□ -0.08
ERBB2-218ENST00000584450 HDAC1Q13547 482 aaPredicted RBP14.58□□□□□ -0.08
ERBB2-218ENST00000584450 MPRIPQ6WCQ1 1025 aa14.58□□□□□ -0.08
ERBB2-218ENST00000584450 RIMS2Q9UQ26 1411 aa14.57□□□□□ -0.08
ERBB2-218ENST00000584450 NUCB1Q02818 461 aa14.57□□□□□ -0.08
ERBB2-218ENST00000584450 RIC3Q7Z5B4 369 aa14.57□□□□□ -0.08
ERBB2-218ENST00000584450 MYL6BP14649 208 aa14.57□□□□□ -0.08
ERBB2-218ENST00000584450 MPNDQ8N594 471 aa14.57□□□□□ -0.08
ERBB2-218ENST00000584450 RAPGEF4Q8WZA2 1011 aa14.57□□□□□ -0.08
ERBB2-218ENST00000584450 GPATCH3Q96I76 525 aa14.57□□□□□ -0.08
ERBB2-218ENST00000584450 GORABQ5T7V8 394 aa14.57□□□□□ -0.08
ERBB2-218ENST00000584450 LRRCC1Q9C099 1032 aa14.57□□□□□ -0.08
ERBB2-218ENST00000584450 PRDM15P57071 1507 aaPredicted RBP14.57□□□□□ -0.08
ERBB2-218ENST00000584450 GNAT3A8MTJ3 354 aa14.56□□□□□ -0.08
ERBB2-218ENST00000584450 PROSER2Q86WR7 435 aaPredicted RBP14.56□□□□□ -0.08
ERBB2-218ENST00000584450 RPAP2Q8IXW5 612 aaPredicted RBP14.56□□□□□ -0.08
ERBB2-218ENST00000584450 OTUD7AQ8TE49 926 aaPredicted RBP14.56□□□□□ -0.08
ERBB2-218ENST00000584450 HSP90B1P14625 803 aaKnown RBP14.56□□□□□ -0.08
ERBB2-218ENST00000584450 CCT4P50991 539 aaKnown RBP14.56□□□□□ -0.08
ERBB2-218ENST00000584450 IL16Q14005 1332 aa14.55□□□□□ -0.08
ERBB2-218ENST00000584450 TTC5Q8N0Z6 440 aa14.55□□□□□ -0.08
ERBB2-218ENST00000584450 LRRFIP2Q9Y608 721 aaKnown RBP14.55□□□□□ -0.08
ERBB2-218ENST00000584450 ZCCHC11Q5TAX3 1644 aaKnown RBP14.55□□□□□ -0.08
ERBB2-218ENST00000584450 NEXNQ0ZGT2 675 aa14.55□□□□□ -0.08
ERBB2-218ENST00000584450 MTHFSDQ2M296 383 aaKnown RBP14.55□□□□□ -0.08
ERBB2-218ENST00000584450 SRCIN1Q9C0H9 1055 aa14.55□□□□□ -0.08
ERBB2-218ENST00000584450 SSFA2P28290 1259 aa14.55□□□□□ -0.08
ERBB2-218ENST00000584450 FOSBP53539 338 aa14.55□□□□□ -0.08
ERBB2-218ENST00000584450 G3BP1Q13283 466 aaKnown RBP eCLIP14.55□□□□□ -0.08
ERBB2-218ENST00000584450 ADCY10Q96PN6 1610 aa14.55□□□□□ -0.08
ERBB2-218ENST00000584450 G2E3Q7L622 706 aa14.54□□□□□ -0.08
ERBB2-218ENST00000584450 VPS37CA5D8V6 355 aaPredicted RBP14.54□□□□□ -0.08
ERBB2-218ENST00000584450 ERC2O15083 957 aa14.54□□□□□ -0.08
ERBB2-218ENST00000584450 IL13P35225 146 aa14.54□□□□□ -0.08
ERBB2-218ENST00000584450 RABEP1Q15276 862 aa14.54□□□□□ -0.08
ERBB2-218ENST00000584450 SMC5Q8IY18 1101 aa14.54□□□□□ -0.08
ERBB2-218ENST00000584450 POGZQ7Z3K3 1410 aa14.54□□□□□ -0.08
ERBB2-218ENST00000584450 ZBTB7BO15156 539 aaPredicted RBP14.54□□□□□ -0.08
ERBB2-218ENST00000584450 FLIIQ13045 1269 aa14.54□□□□□ -0.08
ERBB2-218ENST00000584450 TAF7Q15545 349 aaPredicted RBP14.53□□□□□ -0.08
ERBB2-218ENST00000584450 BMP2KLQ5H9B9 411 aa14.53□□□□□ -0.08
ERBB2-218ENST00000584450 TAF7LQ5H9L4 462 aa14.53□□□□□ -0.08
ERBB2-218ENST00000584450 CLASRPQ8N2M8 674 aaKnown RBP14.53□□□□□ -0.08
ERBB2-218ENST00000584450 TRPM1Q7Z4N2 1603 aa14.53□□□□□ -0.08
ERBB2-218ENST00000584450 NUCB2P80303 420 aa14.53□□□□□ -0.08
ERBB2-218ENST00000584450 SKOR2Q2VWA4 1001 aaPredicted RBP14.53□□□□□ -0.08
ERBB2-218ENST00000584450 TNPO1Q92973 898 aaKnown RBP14.53□□□□□ -0.08
ERBB2-218ENST00000584450 TRPM2O94759 1503 aa14.52□□□□□ -0.08
ERBB2-218ENST00000584450 BTBD11A6QL63 1104 aa14.52□□□□□ -0.08
ERBB2-218ENST00000584450 CWC27Q6UX04 472 aaKnown RBP14.52□□□□□ -0.08
ERBB2-218ENST00000584450 CHMP4AQ9BY43 222 aa14.52□□□□□ -0.08
ERBB2-218ENST00000584450 PUS7Q96PZ0 661 aaKnown RBP14.52□□□□□ -0.09
ERBB2-218ENST00000584450 PLEKHO1Q53GL0 409 aaPredicted RBP14.52□□□□□ -0.09
ERBB2-218ENST00000584450 NEUROD6Q96NK8 337 aa14.52□□□□□ -0.09
ERBB2-218ENST00000584450 PLEKHF1Q96S99 279 aa14.52□□□□□ -0.09
ERBB2-218ENST00000584450 ZMYM3Q14202 1370 aa14.51□□□□□ -0.09
ERBB2-218ENST00000584450 ZRSR1Q15695 479 aaKnown RBP14.51□□□□□ -0.09
ERBB2-218ENST00000584450 JARID2Q92833 1246 aaPredicted RBP14.51□□□□□ -0.09
ERBB2-218ENST00000584450 MAP3K19Q56UN5 1328 aa14.51□□□□□ -0.09
ERBB2-218ENST00000584450 UHRF1BP1LA0JNW5 1464 aa14.51□□□□□ -0.09
ERBB2-218ENST00000584450 ANKLE2Q86XL3 938 aa14.51□□□□□ -0.09
ERBB2-218ENST00000584450 EYA1Q99502 592 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms