RNA–Protein interactions for RNA: ENST00000583311.1

MIR3960-201, Transcript of microRNA 3960, humanhuman

BASIC

Gene MIR3960, Length 91 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR3960-201ENST00000583311 GJD4Q96KN9 370 aaPredicted RBP33.44■■■□□ 2.94
MIR3960-201ENST00000583311 COL18A1P39060 1754 aa33.44■■■□□ 2.94
MIR3960-201ENST00000583311 AMER1Q5JTC6 1135 aaPredicted RBP33.43■■■□□ 2.94
MIR3960-201ENST00000583311 COL5A2P05997 1499 aaPredicted RBP33.43■■■□□ 2.94
MIR3960-201ENST00000583311 MAP3K19Q56UN5 1328 aa33.41■■■□□ 2.94
MIR3960-201ENST00000583311 MORC1Q86VD1 984 aa33.4■■■□□ 2.94
MIR3960-201ENST00000583311 RTL1A6NKG5 1358 aa33.39■■■□□ 2.94
MIR3960-201ENST00000583311 AMPHP49418 695 aa33.39■■■□□ 2.94
MIR3960-201ENST00000583311 AXIN2Q9Y2T1 843 aa33.39■■■□□ 2.94
MIR3960-201ENST00000583311 BLMP54132 1417 aaPredicted RBP33.38■■■□□ 2.93
MIR3960-201ENST00000583311 NPC1L1Q9UHC9 1359 aa33.38■■■□□ 2.93
MIR3960-201ENST00000583311 IP6K1Q92551 441 aa33.38■■■□□ 2.93
MIR3960-201ENST00000583311 CDK12Q9NYV4 1490 aaPredicted RBP33.37■■■□□ 2.93
MIR3960-201ENST00000583311 KIF24Q5T7B8 1368 aa33.37■■■□□ 2.93
MIR3960-201ENST00000583311 RRS1Q15050 365 aaKnown RBP33.37■■■□□ 2.93
MIR3960-201ENST00000583311 SPATA31A5Q5VU36 1347 aa33.36■■■□□ 2.93
MIR3960-201ENST00000583311 SPATA31A7Q8IWB4 1347 aa33.36■■■□□ 2.93
MIR3960-201ENST00000583311 FBLN1P23142 703 aa33.36■■■□□ 2.93
MIR3960-201ENST00000583311 WDR17Q8IZU2 1322 aa33.34■■■□□ 2.93
MIR3960-201ENST00000583311 LARP1Q6PKG0 1096 aaKnown RBP33.34■■■□□ 2.93
MIR3960-201ENST00000583311 GLI3P10071 1580 aa33.34■■■□□ 2.93
MIR3960-201ENST00000583311 CSB-PGBD3P0DP91 1061 aa33.33■■■□□ 2.93
MIR3960-201ENST00000583311 HOXC9P31274 260 aa33.33■■■□□ 2.93
MIR3960-201ENST00000583311 RGPD5Q99666 1765 aa33.33■■■□□ 2.93
MIR3960-201ENST00000583311 CRB1P82279 1406 aa33.33■■■□□ 2.93
MIR3960-201ENST00000583311 TNNT2P45379 298 aaPredicted RBP33.32■■■□□ 2.92
MIR3960-201ENST00000583311 ILDR2Q71H61 639 aa33.32■■■□□ 2.92
MIR3960-201ENST00000583311 SPATA31A1Q5TZJ5 1347 aa33.31■■■□□ 2.92
MIR3960-201ENST00000583311 CC2D1BQ5T0F9 858 aaKnown RBP33.31■■■□□ 2.92
MIR3960-201ENST00000583311 TOM1L2Q6ZVM7 507 aa33.31■■■□□ 2.92
MIR3960-201ENST00000583311 FLT4P35916 1363 aa33.31■■■□□ 2.92
MIR3960-201ENST00000583311 ZNF316A6NFI3 1004 aaPredicted RBP33.3■■■□□ 2.92
MIR3960-201ENST00000583311 ERBB3P21860 1342 aa33.29■■■□□ 2.92
MIR3960-201ENST00000583311 ANKRD24Q8TF21 1146 aa33.29■■■□□ 2.92
MIR3960-201ENST00000583311 THRAP3Q9Y2W1 955 aaKnown RBP33.28■■■□□ 2.92
MIR3960-201ENST00000583311 DDX10Q13206 875 aaKnown RBP33.27■■■□□ 2.92
MIR3960-201ENST00000583311 USP35Q9P2H5 1018 aa33.27■■■□□ 2.92
MIR3960-201ENST00000583311 EMILIN1Q9Y6C2 1016 aa33.27■■■□□ 2.92
MIR3960-201ENST00000583311 PPM1GO15355 546 aaPredicted RBP33.26■■■□□ 2.91
MIR3960-201ENST00000583311 TCP11L2Q8N4U5 519 aa33.26■■■□□ 2.91
MIR3960-201ENST00000583311 POLKQ9UBT6 870 aa33.26■■■□□ 2.91
MIR3960-201ENST00000583311 RGS12O14924 1447 aa33.26■■■□□ 2.91
MIR3960-201ENST00000583311 MAP2P11137 1827 aaKnown RBP33.25■■■□□ 2.91
MIR3960-201ENST00000583311 INSRP06213 1382 aa33.25■■■□□ 2.91
MIR3960-201ENST00000583311 SMG6Q86US8 1419 aaKnown RBP33.25■■■□□ 2.91
MIR3960-201ENST00000583311 ONECUT3O60422 494 aaPredicted RBP33.24■■■□□ 2.91
MIR3960-201ENST00000583311 FAM98CQ17RN3 349 aaKnown RBP33.24■■■□□ 2.91
MIR3960-201ENST00000583311 CARD10Q9BWT7 1032 aa33.24■■■□□ 2.91
MIR3960-201ENST00000583311 PEAK1Q9H792 1746 aa33.23■■■□□ 2.91
MIR3960-201ENST00000583311 BARGINQ6ZT62 677 aa33.23■■■□□ 2.91
MIR3960-201ENST00000583311 LTV1Q96GA3 475 aaPredicted RBP33.22■■■□□ 2.91
MIR3960-201ENST00000583311 FAM208AQ9UK61 1670 aaKnown RBP33.22■■■□□ 2.91
MIR3960-201ENST00000583311 A0A0G2JS52 829 aa33.21■■■□□ 2.91
MIR3960-201ENST00000583311 MYT1Q01538 1121 aa33.21■■■□□ 2.91
MIR3960-201ENST00000583311 CNGB1Q14028 1251 aaPredicted RBP33.21■■■□□ 2.91
MIR3960-201ENST00000583311 HSP90AB2PQ58FF8 381 aa33.2■■■□□ 2.91
MIR3960-201ENST00000583311 NLRP2Q9NX02 1062 aa33.2■■■□□ 2.91
MIR3960-201ENST00000583311 SEPT12Q8IYM1 358 aa33.19■■■□□ 2.9
MIR3960-201ENST00000583311 CDCA7Q9BWT1 371 aaPredicted RBP33.15■■■□□ 2.9
MIR3960-201ENST00000583311 THSD7AQ9UPZ6 1657 aa33.13■■■□□ 2.89
MIR3960-201ENST00000583311 MTHFSP49914 203 aa33.09■■■□□ 2.89
MIR3960-201ENST00000583311 WNK3Q9BYP7 1800 aa33.07■■■□□ 2.89
MIR3960-201ENST00000583311 KRT27Q7Z3Y8 459 aa33.07■■■□□ 2.88
MIR3960-201ENST00000583311 NBPF6Q5VWK0 638 aa33.06■■■□□ 2.88
MIR3960-201ENST00000583311 NBPF4Q96M43 638 aa33.06■■■□□ 2.88
MIR3960-201ENST00000583311 PARP4Q9UKK3 1724 aaKnown RBP33.05■■■□□ 2.88
MIR3960-201ENST00000583311 IL2RBP14784 551 aa33.05■■■□□ 2.88
MIR3960-201ENST00000583311 EIF4A2Q14240 407 aaKnown RBP33.05■■■□□ 2.88
MIR3960-201ENST00000583311 DISP2A7MBM2 1401 aa33.04■■■□□ 2.88
MIR3960-201ENST00000583311 PARD3Q8TEW0 1356 aa33.04■■■□□ 2.88
MIR3960-201ENST00000583311 BRWD3Q6RI45 1802 aa33.03■■■□□ 2.88
MIR3960-201ENST00000583311 PDE3BQ13370 1112 aa33.03■■■□□ 2.88
MIR3960-201ENST00000583311 RGPD2P0DJD1 1756 aa33.02■■■□□ 2.88
MIR3960-201ENST00000583311 RALBP1Q15311 655 aa33.02■■■□□ 2.88
MIR3960-201ENST00000583311 DDB1Q16531 1140 aa33.02■■■□□ 2.88
MIR3960-201ENST00000583311 PPP2R1AP30153 589 aa33.01■■■□□ 2.87
MIR3960-201ENST00000583311 CFAP53Q96M91 514 aa32.99■■■□□ 2.87
MIR3960-201ENST00000583311 EXOC5O00471 708 aa32.98■■■□□ 2.87
MIR3960-201ENST00000583311 USHBP1Q8N6Y0 703 aa32.98■■■□□ 2.87
MIR3960-201ENST00000583311 EYA1Q99502 592 aa32.98■■■□□ 2.87
MIR3960-201ENST00000583311 LRRC37A3O60309 1634 aa32.98■■■□□ 2.87
MIR3960-201ENST00000583311 RAPGEF4Q8WZA2 1011 aa32.97■■■□□ 2.87
MIR3960-201ENST00000583311 SOCS7O14512 581 aa32.96■■■□□ 2.87
MIR3960-201ENST00000583311 NCAPD2Q15021 1401 aa32.95■■■□□ 2.87
MIR3960-201ENST00000583311 DIAPH1O60610 1272 aaKnown RBP32.95■■■□□ 2.87
MIR3960-201ENST00000583311 TNS2Q63HR2 1409 aa32.94■■■□□ 2.86
MIR3960-201ENST00000583311 IL13P35225 146 aa32.94■■■□□ 2.86
MIR3960-201ENST00000583311 TATP17735 454 aaPredicted RBP32.93■■■□□ 2.86
MIR3960-201ENST00000583311 IGSF1Q8N6C5 1336 aa32.93■■■□□ 2.86
MIR3960-201ENST00000583311 MEGF6O75095 1541 aa32.89■■■□□ 2.86
MIR3960-201ENST00000583311 OVOS2A0A0G2JMS6 1433 aa32.89■■■□□ 2.86
MIR3960-201ENST00000583311 FAM196AQ6ZSG2 479 aa32.89■■■□□ 2.86
MIR3960-201ENST00000583311 COL3A1P02461 1466 aaPredicted RBP32.88■■■□□ 2.85
MIR3960-201ENST00000583311 MYBBP1AQ9BQG0 1328 aaKnown RBP32.87■■■□□ 2.85
MIR3960-201ENST00000583311 PRKRIP1Q9H875 184 aaPredicted RBP32.86■■■□□ 2.85
MIR3960-201ENST00000583311 RGPD1P0DJD0 1748 aa32.85■■■□□ 2.85
MIR3960-201ENST00000583311 PLEKHG2Q9H7P9 1386 aa32.85■■■□□ 2.85
MIR3960-201ENST00000583311 ZCRB1Q8TBF4 217 aaKnown RBP32.85■■■□□ 2.85
MIR3960-201ENST00000583311 NUDCQ9Y266 331 aa32.85■■■□□ 2.85
MIR3960-201ENST00000583311 FAM182BQ5T319 152 aa32.84■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms