RNA–Protein interactions for RNA: ENST00000581850.1

LINC00473-203, long intergenic non-protein coding RNA 473, humanhuman

TSL 3 BASIC

Gene LINC00473, Length 929 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473-203ENST00000581850 VPS72Q15906 364 aa22.37■■□□□ 1.17
LINC00473-203ENST00000581850 PEAK1Q9H792 1746 aa22.37■■□□□ 1.17
LINC00473-203ENST00000581850 BRWD3Q6RI45 1802 aa22.36■■□□□ 1.17
LINC00473-203ENST00000581850 GJD4Q96KN9 370 aaPredicted RBP22.36■■□□□ 1.17
LINC00473-203ENST00000581850 WNK3Q9BYP7 1800 aa22.36■■□□□ 1.17
LINC00473-203ENST00000581850 FBLN1P23142 703 aa22.35■■□□□ 1.17
LINC00473-203ENST00000581850 AXIN2Q9Y2T1 843 aa22.35■■□□□ 1.17
LINC00473-203ENST00000581850 CGNL1Q0VF96 1302 aa22.34■■□□□ 1.17
LINC00473-203ENST00000581850 MAP2P11137 1827 aaKnown RBP22.34■■□□□ 1.17
LINC00473-203ENST00000581850 THSD7AQ9UPZ6 1657 aa22.33■■□□□ 1.16
LINC00473-203ENST00000581850 STRN4Q9NRL3 753 aa22.32■■□□□ 1.16
LINC00473-203ENST00000581850 SPATA31A5Q5VU36 1347 aa22.31■■□□□ 1.16
LINC00473-203ENST00000581850 SPATA31A7Q8IWB4 1347 aa22.31■■□□□ 1.16
LINC00473-203ENST00000581850 RGPD2P0DJD1 1756 aa22.3■■□□□ 1.16
LINC00473-203ENST00000581850 LARP1Q6PKG0 1096 aaKnown RBP22.3■■□□□ 1.16
LINC00473-203ENST00000581850 MAP3K19Q56UN5 1328 aa22.3■■□□□ 1.16
LINC00473-203ENST00000581850 PER1O15534 1290 aaPredicted RBP22.29■■□□□ 1.16
LINC00473-203ENST00000581850 CCDC9Q9Y3X0 531 aaKnown RBP22.29■■□□□ 1.16
LINC00473-203ENST00000581850 FAM208AQ9UK61 1670 aaKnown RBP22.29■■□□□ 1.16
LINC00473-203ENST00000581850 SPATA31A1Q5TZJ5 1347 aa22.29■■□□□ 1.16
LINC00473-203ENST00000581850 NSD2O96028 1365 aa22.28■■□□□ 1.16
LINC00473-203ENST00000581850 CRB1P82279 1406 aa22.27■■□□□ 1.16
LINC00473-203ENST00000581850 RRS1Q15050 365 aaKnown RBP22.27■■□□□ 1.16
LINC00473-203ENST00000581850 BLMP54132 1417 aaPredicted RBP22.26■■□□□ 1.15
LINC00473-203ENST00000581850 EVA1CP58658 441 aa22.26■■□□□ 1.15
LINC00473-203ENST00000581850 AMER1Q5JTC6 1135 aaPredicted RBP22.26■■□□□ 1.15
LINC00473-203ENST00000581850 WDR17Q8IZU2 1322 aa22.26■■□□□ 1.15
LINC00473-203ENST00000581850 KNSTRNQ9Y448 316 aa22.25■■□□□ 1.15
LINC00473-203ENST00000581850 PARP4Q9UKK3 1724 aaKnown RBP22.25■■□□□ 1.15
LINC00473-203ENST00000581850 RTL1A6NKG5 1358 aa22.25■■□□□ 1.15
LINC00473-203ENST00000581850 HOXC9P31274 260 aa22.24■■□□□ 1.15
LINC00473-203ENST00000581850 IP6K1Q92551 441 aa22.24■■□□□ 1.15
LINC00473-203ENST00000581850 EP400Q96L91 3159 aa22.24■■□□□ 1.15
LINC00473-203ENST00000581850 ERBB3P21860 1342 aa22.24■■□□□ 1.15
LINC00473-203ENST00000581850 ONECUT3O60422 494 aaPredicted RBP22.23■■□□□ 1.15
LINC00473-203ENST00000581850 FAM98CQ17RN3 349 aaKnown RBP22.23■■□□□ 1.15
LINC00473-203ENST00000581850 EMILIN1Q9Y6C2 1016 aa22.22■■□□□ 1.15
LINC00473-203ENST00000581850 LRRC37A3O60309 1634 aa22.21■■□□□ 1.15
LINC00473-203ENST00000581850 USP35Q9P2H5 1018 aa22.21■■□□□ 1.15
LINC00473-203ENST00000581850 SEPT12Q8IYM1 358 aa22.2■■□□□ 1.14
LINC00473-203ENST00000581850 ANKRD24Q8TF21 1146 aa22.2■■□□□ 1.14
LINC00473-203ENST00000581850 SMG6Q86US8 1419 aaKnown RBP22.2■■□□□ 1.14
LINC00473-203ENST00000581850 AMPHP49418 695 aa22.19■■□□□ 1.14
LINC00473-203ENST00000581850 TOM1L2Q6ZVM7 507 aa22.19■■□□□ 1.14
LINC00473-203ENST00000581850 FLT4P35916 1363 aa22.19■■□□□ 1.14
LINC00473-203ENST00000581850 KIF24Q5T7B8 1368 aa22.19■■□□□ 1.14
LINC00473-203ENST00000581850 NPC1L1Q9UHC9 1359 aa22.18■■□□□ 1.14
LINC00473-203ENST00000581850 TNNT2P45379 298 aaPredicted RBP22.18■■□□□ 1.14
LINC00473-203ENST00000581850 DISP2A7MBM2 1401 aa22.17■■□□□ 1.14
LINC00473-203ENST00000581850 CSB-PGBD3P0DP91 1061 aa22.17■■□□□ 1.14
LINC00473-203ENST00000581850 BARGINQ6ZT62 677 aa22.17■■□□□ 1.14
LINC00473-203ENST00000581850 TCP11L2Q8N4U5 519 aa22.17■■□□□ 1.14
LINC00473-203ENST00000581850 POLKQ9UBT6 870 aa22.17■■□□□ 1.14
LINC00473-203ENST00000581850 CARD10Q9BWT7 1032 aa22.16■■□□□ 1.14
LINC00473-203ENST00000581850 THRAP3Q9Y2W1 955 aaKnown RBP22.16■■□□□ 1.14
LINC00473-203ENST00000581850 INSRP06213 1382 aa22.15■■□□□ 1.14
LINC00473-203ENST00000581850 HSP90AB2PQ58FF8 381 aa22.15■■□□□ 1.14
LINC00473-203ENST00000581850 CC2D1BQ5T0F9 858 aaKnown RBP22.15■■□□□ 1.14
LINC00473-203ENST00000581850 MORC1Q86VD1 984 aa22.15■■□□□ 1.14
LINC00473-203ENST00000581850 LTV1Q96GA3 475 aaPredicted RBP22.15■■□□□ 1.14
LINC00473-203ENST00000581850 A0A0G2JS52 829 aa22.13■■□□□ 1.13
LINC00473-203ENST00000581850 MYT1Q01538 1121 aa22.13■■□□□ 1.13
LINC00473-203ENST00000581850 SHANK3Q9BYB0 1731 aa22.11■■□□□ 1.13
LINC00473-203ENST00000581850 NLRP2Q9NX02 1062 aa22.11■■□□□ 1.13
LINC00473-203ENST00000581850 PPM1GO15355 546 aaPredicted RBP22.1■■□□□ 1.13
LINC00473-203ENST00000581850 CNGB1Q14028 1251 aaPredicted RBP22.09■■□□□ 1.13
LINC00473-203ENST00000581850 KRT27Q7Z3Y8 459 aa22.09■■□□□ 1.13
LINC00473-203ENST00000581850 RGPD1P0DJD0 1748 aa22.08■■□□□ 1.12
LINC00473-203ENST00000581850 NCAPD2Q15021 1401 aa22.07■■□□□ 1.12
LINC00473-203ENST00000581850 NBPF6Q5VWK0 638 aa22.07■■□□□ 1.12
LINC00473-203ENST00000581850 NBPF4Q96M43 638 aa22.07■■□□□ 1.12
LINC00473-203ENST00000581850 SBF2Q86WG5 1849 aa22.06■■□□□ 1.12
LINC00473-203ENST00000581850 DDX10Q13206 875 aaKnown RBP22.06■■□□□ 1.12
LINC00473-203ENST00000581850 MEGF6O75095 1541 aa22.06■■□□□ 1.12
LINC00473-203ENST00000581850 TNS2Q63HR2 1409 aa22.06■■□□□ 1.12
LINC00473-203ENST00000581850 FAM182BQ5T319 152 aa22.05■■□□□ 1.12
LINC00473-203ENST00000581850 USHBP1Q8N6Y0 703 aa22.05■■□□□ 1.12
LINC00473-203ENST00000581850 UPF1Q92900 1129 aaKnown RBP eCLIP22.05■■□□□ 1.12
LINC00473-203ENST00000581850 TNS1Q9HBL0 1735 aaKnown RBP22.05■■□□□ 1.12
LINC00473-203ENST00000581850 EIF4A2Q14240 407 aaKnown RBP22.04■■□□□ 1.12
LINC00473-203ENST00000581850 COL3A1P02461 1466 aaPredicted RBP22.03■■□□□ 1.12
LINC00473-203ENST00000581850 CDCA7Q9BWT1 371 aaPredicted RBP22.03■■□□□ 1.12
LINC00473-203ENST00000581850 PKD1L3Q7Z443 1732 aa22.03■■□□□ 1.12
LINC00473-203ENST00000581850 IL2RBP14784 551 aa22.01■■□□□ 1.11
LINC00473-203ENST00000581850 MTHFSP49914 203 aa22.01■■□□□ 1.11
LINC00473-203ENST00000581850 DDB1Q16531 1140 aa22.01■■□□□ 1.11
LINC00473-203ENST00000581850 OVOS2A0A0G2JMS6 1433 aa22■■□□□ 1.11
LINC00473-203ENST00000581850 PARD3Q8TEW0 1356 aa21.99■■□□□ 1.11
LINC00473-203ENST00000581850 EYA1Q99502 592 aa21.99■■□□□ 1.11
LINC00473-203ENST00000581850 ZNF316A6NFI3 1004 aaPredicted RBP21.98■■□□□ 1.11
LINC00473-203ENST00000581850 PDE3BQ13370 1112 aa21.98■■□□□ 1.11
LINC00473-203ENST00000581850 MARCH10Q8NA82 808 aaPredicted RBP21.97■■□□□ 1.11
LINC00473-203ENST00000581850 IGSF1Q8N6C5 1336 aa21.97■■□□□ 1.11
LINC00473-203ENST00000581850 EXOC5O00471 708 aa21.95■■□□□ 1.1
LINC00473-203ENST00000581850 PPP2R1AP30153 589 aa21.95■■□□□ 1.1
LINC00473-203ENST00000581850 IL13P35225 146 aa21.95■■□□□ 1.1
LINC00473-203ENST00000581850 NHSQ6T4R5 1651 aa21.94■■□□□ 1.1
LINC00473-203ENST00000581850 DOT1LQ8TEK3 1739 aa21.94■■□□□ 1.1
LINC00473-203ENST00000581850 BCL9O00512 1426 aa21.92■■□□□ 1.1
LINC00473-203ENST00000581850 FAM196AQ6ZSG2 479 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms