RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 PLCH1Q4KWH8 1693 aa21.47■■□□□ 1.03
CSNK1D-212ENST00000580061 PPM1GO15355 546 aaPredicted RBP21.46■■□□□ 1.03
CSNK1D-212ENST00000580061 CHRNA2Q15822 529 aa21.46■■□□□ 1.03
CSNK1D-212ENST00000580061 FAM83GA6ND36 823 aa21.45■■□□□ 1.02
CSNK1D-212ENST00000580061 HOXC9P31274 260 aa21.45■■□□□ 1.02
CSNK1D-212ENST00000580061 IP6K1Q92551 441 aa21.45■■□□□ 1.02
CSNK1D-212ENST00000580061 ILDR1Q86SU0 546 aaPredicted RBP21.44■■□□□ 1.02
CSNK1D-212ENST00000580061 MIER1Q8N108 512 aa21.44■■□□□ 1.02
CSNK1D-212ENST00000580061 BLMP54132 1417 aaPredicted RBP21.44■■□□□ 1.02
CSNK1D-212ENST00000580061 CAMTA1Q9Y6Y1 1673 aa21.44■■□□□ 1.02
CSNK1D-212ENST00000580061 NWD2Q9ULI1 1742 aa21.43■■□□□ 1.02
CSNK1D-212ENST00000580061 HSP90AB2PQ58FF8 381 aa21.43■■□□□ 1.02
CSNK1D-212ENST00000580061 AXIN2Q9Y2T1 843 aa21.43■■□□□ 1.02
CSNK1D-212ENST00000580061 INSRP06213 1382 aa21.43■■□□□ 1.02
CSNK1D-212ENST00000580061 COL3A1P02461 1466 aaPredicted RBP21.43■■□□□ 1.02
CSNK1D-212ENST00000580061 NRAPQ86VF7 1730 aa21.41■■□□□ 1.02
CSNK1D-212ENST00000580061 CFAP53Q96M91 514 aa21.4■■□□□ 1.02
CSNK1D-212ENST00000580061 SLIT2O94813 1529 aa21.39■■□□□ 1.02
CSNK1D-212ENST00000580061 MEX3CQ5U5Q3 659 aaKnown RBP21.39■■□□□ 1.01
CSNK1D-212ENST00000580061 FAM208AQ9UK61 1670 aaKnown RBP21.38■■□□□ 1.01
CSNK1D-212ENST00000580061 CCDC184Q52MB2 194 aa21.38■■□□□ 1.01
CSNK1D-212ENST00000580061 C8orf37Q96NL8 207 aa21.38■■□□□ 1.01
CSNK1D-212ENST00000580061 BTG4Q9NY30 223 aa21.38■■□□□ 1.01
CSNK1D-212ENST00000580061 RGPD2P0DJD1 1756 aa21.38■■□□□ 1.01
CSNK1D-212ENST00000580061 COL5A2P05997 1499 aaPredicted RBP21.38■■□□□ 1.01
CSNK1D-212ENST00000580061 NGLY1Q96IV0 654 aa21.37■■□□□ 1.01
CSNK1D-212ENST00000580061 ERBB3P21860 1342 aa21.36■■□□□ 1.01
CSNK1D-212ENST00000580061 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.36■■□□□ 1.01
CSNK1D-212ENST00000580061 CCER2I3L3R5 266 aa21.36■■□□□ 1.01
CSNK1D-212ENST00000580061 EIF4A2Q14240 407 aaKnown RBP21.36■■□□□ 1.01
CSNK1D-212ENST00000580061 FNBP4Q8N3X1 1017 aaPredicted RBP21.36■■□□□ 1.01
CSNK1D-212ENST00000580061 RGPD1P0DJD0 1748 aa21.35■■□□□ 1.01
CSNK1D-212ENST00000580061 DIAPH1O60610 1272 aaKnown RBP21.35■■□□□ 1.01
CSNK1D-212ENST00000580061 ANKRD24Q8TF21 1146 aa21.35■■□□□ 1.01
CSNK1D-212ENST00000580061 IL13P35225 146 aa21.34■■□□□ 1.01
CSNK1D-212ENST00000580061 LTV1Q96GA3 475 aaPredicted RBP21.34■■□□□ 1.01
CSNK1D-212ENST00000580061 MRS2Q9HD23 443 aa21.34■■□□□ 1.01
CSNK1D-212ENST00000580061 BCL9LQ86UU0 1499 aa21.32■■□□□ 1
CSNK1D-212ENST00000580061 WDR17Q8IZU2 1322 aa21.31■■□□□ 1
CSNK1D-212ENST00000580061 EVA1CP58658 441 aa21.31■■□□□ 1
CSNK1D-212ENST00000580061 STRN4Q9NRL3 753 aa21.31■■□□□ 1
CSNK1D-212ENST00000580061 AFF2P51816 1311 aa21.3■■□□□ 1
CSNK1D-212ENST00000580061 UNC5CLQ8IV45 518 aa21.3■■□□□ 1
CSNK1D-212ENST00000580061 CSB-PGBD3P0DP91 1061 aa21.29■■□□□ 1
CSNK1D-212ENST00000580061 LARP1Q6PKG0 1096 aaKnown RBP21.29■■□□□ 1
CSNK1D-212ENST00000580061 USP21Q9UK80 565 aa21.29■■□□□ 1
CSNK1D-212ENST00000580061 NUDCQ9Y266 331 aa21.29■■□□□ 1
CSNK1D-212ENST00000580061 EYA1Q99502 592 aa21.28■■□□□ 1
CSNK1D-212ENST00000580061 CRB1P82279 1406 aa21.28■■□□□ 1
CSNK1D-212ENST00000580061 IGSF1Q8N6C5 1336 aa21.28■■□□□ 1
CSNK1D-212ENST00000580061 NBPF6Q5VWK0 638 aa21.27■■□□□ 1
CSNK1D-212ENST00000580061 PNISRQ8TF01 805 aaKnown RBP21.27■■□□□ 1
CSNK1D-212ENST00000580061 NBPF4Q96M43 638 aa21.27■■□□□ 1
CSNK1D-212ENST00000580061 U2SURPO15042 1029 aaKnown RBP21.26■□□□□ 0.99
CSNK1D-212ENST00000580061 TOM1L2Q6ZVM7 507 aa21.26■□□□□ 0.99
CSNK1D-212ENST00000580061 NCAPD2Q15021 1401 aa21.26■□□□□ 0.99
CSNK1D-212ENST00000580061 CARD10Q9BWT7 1032 aa21.25■□□□□ 0.99
CSNK1D-212ENST00000580061 NLRP2Q9NX02 1062 aa21.25■□□□□ 0.99
CSNK1D-212ENST00000580061 VPS72Q15906 364 aa21.24■□□□□ 0.99
CSNK1D-212ENST00000580061 WNK3Q9BYP7 1800 aa21.23■□□□□ 0.99
CSNK1D-212ENST00000580061 U2AF1L5P0DN76 240 aaPredicted RBP21.23■□□□□ 0.99
CSNK1D-212ENST00000580061 U2AF1Q01081 240 aaKnown RBP eCLIP21.23■□□□□ 0.99
CSNK1D-212ENST00000580061 WDR43Q15061 677 aaKnown RBP eCLIP21.23■□□□□ 0.99
CSNK1D-212ENST00000580061 KDRP35968 1356 aa21.23■□□□□ 0.99
CSNK1D-212ENST00000580061 ATRNO75882 1429 aa21.22■□□□□ 0.99
CSNK1D-212ENST00000580061 USHBP1Q8N6Y0 703 aa21.22■□□□□ 0.99
CSNK1D-212ENST00000580061 SPATA31A1Q5TZJ5 1347 aa21.22■□□□□ 0.99
CSNK1D-212ENST00000580061 SPATA31A5Q5VU36 1347 aa21.22■□□□□ 0.99
CSNK1D-212ENST00000580061 SPATA31A7Q8IWB4 1347 aa21.22■□□□□ 0.99
CSNK1D-212ENST00000580061 HMOX1P09601 288 aa21.21■□□□□ 0.99
CSNK1D-212ENST00000580061 SULT6B1Q6IMI4 303 aa21.21■□□□□ 0.99
CSNK1D-212ENST00000580061 ZNF772Q68DY9 489 aaPredicted RBP21.2■□□□□ 0.98
CSNK1D-212ENST00000580061 AEBP1Q8IUX7 1158 aa21.2■□□□□ 0.98
CSNK1D-212ENST00000580061 TRPC5Q9UL62 973 aaPredicted RBP21.2■□□□□ 0.98
CSNK1D-212ENST00000580061 ADAMTS8Q9UP79 889 aa21.2■□□□□ 0.98
CSNK1D-212ENST00000580061 USP35Q9P2H5 1018 aa21.19■□□□□ 0.98
CSNK1D-212ENST00000580061 CCDC9Q9Y3X0 531 aaKnown RBP21.19■□□□□ 0.98
CSNK1D-212ENST00000580061 GLI3P10071 1580 aa21.19■□□□□ 0.98
CSNK1D-212ENST00000580061 PARP4Q9UKK3 1724 aaKnown RBP21.18■□□□□ 0.98
CSNK1D-212ENST00000580061 RSPH6AQ9H0K4 717 aa21.18■□□□□ 0.98
CSNK1D-212ENST00000580061 FCHSD2O94868 740 aa21.17■□□□□ 0.98
CSNK1D-212ENST00000580061 FAM9BQ8IZU0 186 aa21.17■□□□□ 0.98
CSNK1D-212ENST00000580061 TCP11L2Q8N4U5 519 aa21.17■□□□□ 0.98
CSNK1D-212ENST00000580061 QTRT2Q9H974 415 aaKnown RBP21.17■□□□□ 0.98
CSNK1D-212ENST00000580061 THRAP3Q9Y2W1 955 aaKnown RBP21.17■□□□□ 0.98
CSNK1D-212ENST00000580061 GJD4Q96KN9 370 aaPredicted RBP21.16■□□□□ 0.98
CSNK1D-212ENST00000580061 RGS17Q9UGC6 210 aaPredicted RBP21.16■□□□□ 0.98
CSNK1D-212ENST00000580061 MEGF6O75095 1541 aa21.15■□□□□ 0.98
CSNK1D-212ENST00000580061 DISP2A7MBM2 1401 aa21.15■□□□□ 0.98
CSNK1D-212ENST00000580061 PHF23Q9BUL5 403 aaPredicted RBP21.15■□□□□ 0.98
CSNK1D-212ENST00000580061 PRKAR2BP31323 418 aa21.14■□□□□ 0.97
CSNK1D-212ENST00000580061 BARGINQ6ZT62 677 aa21.14■□□□□ 0.97
CSNK1D-212ENST00000580061 PKD1L3Q7Z443 1732 aa21.13■□□□□ 0.97
CSNK1D-212ENST00000580061 IL2RBP14784 551 aa21.13■□□□□ 0.97
CSNK1D-212ENST00000580061 RAPGEF4Q8WZA2 1011 aa21.13■□□□□ 0.97
CSNK1D-212ENST00000580061 PLEKHF1Q96S99 279 aa21.13■□□□□ 0.97
CSNK1D-212ENST00000580061 PNNQ9H307 717 aaKnown RBP21.13■□□□□ 0.97
CSNK1D-212ENST00000580061 PLEKHG2Q9H7P9 1386 aa21.12■□□□□ 0.97
CSNK1D-212ENST00000580061 OVOS2A0A0G2JMS6 1433 aa21.12■□□□□ 0.97
CSNK1D-212ENST00000580061 THSD7AQ9UPZ6 1657 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms