RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 CCDC61Q9Y6R9 512 aa16.88■□□□□ 0.29
NDEL1-204ENST00000578172 RNF214Q8ND24 703 aa16.87■□□□□ 0.29
NDEL1-204ENST00000578172 ZBTB7BO15156 539 aaPredicted RBP16.87■□□□□ 0.29
NDEL1-204ENST00000578172 GAS2L2Q8NHY3 880 aa16.87■□□□□ 0.29
NDEL1-204ENST00000578172 ANO2Q9NQ90 1003 aa16.87■□□□□ 0.29
NDEL1-204ENST00000578172 CDC45O75419 566 aa16.87■□□□□ 0.29
NDEL1-204ENST00000578172 CAVIN1Q6NZI2 390 aaKnown RBP16.87■□□□□ 0.29
NDEL1-204ENST00000578172 DDX54Q8TDD1 881 aaKnown RBP16.87■□□□□ 0.29
NDEL1-204ENST00000578172 STK31Q9BXU1 1019 aa16.87■□□□□ 0.29
NDEL1-204ENST00000578172 NLRP6P59044 892 aa16.86■□□□□ 0.29
NDEL1-204ENST00000578172 ANXA1P04083 346 aa16.86■□□□□ 0.29
NDEL1-204ENST00000578172 XPCQ01831 940 aaPredicted RBP16.86■□□□□ 0.29
NDEL1-204ENST00000578172 MAP3K4Q9Y6R4 1608 aa16.85■□□□□ 0.29
NDEL1-204ENST00000578172 G2E3Q7L622 706 aa16.85■□□□□ 0.29
NDEL1-204ENST00000578172 LMOD3Q0VAK6 560 aa16.85■□□□□ 0.29
NDEL1-204ENST00000578172 ANTXR1Q9H6X2 564 aa16.85■□□□□ 0.29
NDEL1-204ENST00000578172 DDX11L8A8MPP1 907 aa16.84■□□□□ 0.29
NDEL1-204ENST00000578172 UPF3BQ9BZI7 483 aaKnown RBP16.84■□□□□ 0.29
NDEL1-204ENST00000578172 YTHDC2Q9H6S0 1430 aaKnown RBP16.84■□□□□ 0.29
NDEL1-204ENST00000578172 SIRT2Q8IXJ6 389 aa16.84■□□□□ 0.29
NDEL1-204ENST00000578172 K7ELQ4 463 aaPredicted RBP16.83■□□□□ 0.29
NDEL1-204ENST00000578172 CHMP4BQ9H444 224 aaKnown RBP16.83■□□□□ 0.29
NDEL1-204ENST00000578172 PRPF40AO75400 957 aaKnown RBP16.83■□□□□ 0.28
NDEL1-204ENST00000578172 NEK4P51957 841 aa16.83■□□□□ 0.28
NDEL1-204ENST00000578172 PHF23Q9BUL5 403 aaPredicted RBP16.83■□□□□ 0.28
NDEL1-204ENST00000578172 GRPEL1Q9HAV7 217 aa16.83■□□□□ 0.28
NDEL1-204ENST00000578172 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.82■□□□□ 0.28
NDEL1-204ENST00000578172 EIF4A2Q14240 407 aaKnown RBP16.82■□□□□ 0.28
NDEL1-204ENST00000578172 GCC1Q96CN9 775 aa16.82■□□□□ 0.28
NDEL1-204ENST00000578172 CT47B1P0C2W7 299 aaPredicted RBP16.82■□□□□ 0.28
NDEL1-204ENST00000578172 CEP152O94986 1710 aa16.81■□□□□ 0.28
NDEL1-204ENST00000578172 ABCC11Q96J66 1382 aa16.81■□□□□ 0.28
NDEL1-204ENST00000578172 AAMPQ13685 434 aa16.81■□□□□ 0.28
NDEL1-204ENST00000578172 PKP1Q13835 747 aa16.81■□□□□ 0.28
NDEL1-204ENST00000578172 CFAP44Q96MT7 982 aa16.81■□□□□ 0.28
NDEL1-204ENST00000578172 IQGAP1P46940 1657 aa16.81■□□□□ 0.28
NDEL1-204ENST00000578172 ZGPATQ8N5A5 531 aaKnown RBP16.81■□□□□ 0.28
NDEL1-204ENST00000578172 KIF1BO60333 1816 aa16.81■□□□□ 0.28
NDEL1-204ENST00000578172 ALDH1L2Q3SY69 923 aa16.81■□□□□ 0.28
NDEL1-204ENST00000578172 RBM27Q9P2N5 1060 aaKnown RBP16.81■□□□□ 0.28
NDEL1-204ENST00000578172 TET3O43151 1660 aa16.81■□□□□ 0.28
NDEL1-204ENST00000578172 IL13P35225 146 aa16.8■□□□□ 0.28
NDEL1-204ENST00000578172 GDPD2Q9HCC8 539 aa16.8■□□□□ 0.28
NDEL1-204ENST00000578172 IFT57Q9NWB7 429 aa16.8■□□□□ 0.28
NDEL1-204ENST00000578172 RNF17Q9BXT8 1623 aaKnown RBP16.8■□□□□ 0.28
NDEL1-204ENST00000578172 NUTM1Q86Y26 1132 aa16.8■□□□□ 0.28
NDEL1-204ENST00000578172 CHMP3Q9Y3E7 222 aa16.8■□□□□ 0.28
NDEL1-204ENST00000578172 ACEP12821 1306 aa16.8■□□□□ 0.28
NDEL1-204ENST00000578172 PKNOX2Q96KN3 472 aa16.79■□□□□ 0.28
NDEL1-204ENST00000578172 PPIP5K1Q6PFW1 1433 aa16.79■□□□□ 0.28
NDEL1-204ENST00000578172 PTMAP06454 111 aaKnown RBP16.79■□□□□ 0.28
NDEL1-204ENST00000578172 GSPT1P15170 499 aaKnown RBP16.79■□□□□ 0.28
NDEL1-204ENST00000578172 SDSP20132 328 aa16.79■□□□□ 0.28
NDEL1-204ENST00000578172 BMP2KLQ5H9B9 411 aa16.79■□□□□ 0.28
NDEL1-204ENST00000578172 DNTTIP2Q5QJE6 756 aaKnown RBP16.79■□□□□ 0.28
NDEL1-204ENST00000578172 POGZQ7Z3K3 1410 aa16.78■□□□□ 0.28
NDEL1-204ENST00000578172 EFCAB6Q5THR3 1501 aa16.78■□□□□ 0.28
NDEL1-204ENST00000578172 SBNO2Q9Y2G9 1366 aa16.78■□□□□ 0.28
NDEL1-204ENST00000578172 MYOM2P54296 1465 aa16.78■□□□□ 0.28
NDEL1-204ENST00000578172 PPRC1Q5VV67 1664 aaKnown RBP16.78■□□□□ 0.28
NDEL1-204ENST00000578172 INTS3Q68E01 1043 aaKnown RBP16.77■□□□□ 0.28
NDEL1-204ENST00000578172 PLEKHM2Q8IWE5 1019 aa16.77■□□□□ 0.28
NDEL1-204ENST00000578172 NSD2O96028 1365 aa16.77■□□□□ 0.27
NDEL1-204ENST00000578172 ST18O60284 1047 aa16.77■□□□□ 0.27
NDEL1-204ENST00000578172 HMMRO75330 724 aa16.77■□□□□ 0.27
NDEL1-204ENST00000578172 TRHP20396 242 aaPredicted RBP16.77■□□□□ 0.27
NDEL1-204ENST00000578172 GAS2L3Q86XJ1 694 aa16.77■□□□□ 0.27
NDEL1-204ENST00000578172 FAM43AQ8N2R8 423 aa16.77■□□□□ 0.27
NDEL1-204ENST00000578172 KCNJ4P48050 445 aa16.76■□□□□ 0.27
NDEL1-204ENST00000578172 AIMP1Q12904 312 aaKnown RBP16.76■□□□□ 0.27
NDEL1-204ENST00000578172 ABTB2Q8N961 1025 aa16.76■□□□□ 0.27
NDEL1-204ENST00000578172 MROH2AA6NES4 1674 aa16.75■□□□□ 0.27
NDEL1-204ENST00000578172 MRE11P49959 708 aa16.75■□□□□ 0.27
NDEL1-204ENST00000578172 TULP4Q9NRJ4 1543 aa16.75■□□□□ 0.27
NDEL1-204ENST00000578172 SURF6O75683 361 aaKnown RBP16.75■□□□□ 0.27
NDEL1-204ENST00000578172 HDGFP51858 240 aaKnown RBP16.75■□□□□ 0.27
NDEL1-204ENST00000578172 MTHFSDQ2M296 383 aaKnown RBP16.75■□□□□ 0.27
NDEL1-204ENST00000578172 UHRF1BP1LA0JNW5 1464 aa16.74■□□□□ 0.27
NDEL1-204ENST00000578172 NASPP49321 788 aaPredicted RBP16.74■□□□□ 0.27
NDEL1-204ENST00000578172 MYOM1P52179 1685 aa16.74■□□□□ 0.27
NDEL1-204ENST00000578172 BCL11BQ9C0K0 894 aaPredicted RBP16.74■□□□□ 0.27
NDEL1-204ENST00000578172 METP08581 1390 aa16.73■□□□□ 0.27
NDEL1-204ENST00000578172 LAMC1P11047 1609 aa16.73■□□□□ 0.27
NDEL1-204ENST00000578172 IL16Q14005 1332 aa16.73■□□□□ 0.27
NDEL1-204ENST00000578172 LRRFIP2Q9Y608 721 aaKnown RBP16.73■□□□□ 0.27
NDEL1-204ENST00000578172 EID1Q9Y6B2 187 aa16.73■□□□□ 0.27
NDEL1-204ENST00000578172 QRICH2Q9H0J4 1663 aa16.72■□□□□ 0.27
NDEL1-204ENST00000578172 MSNP26038 577 aaKnown RBP16.72■□□□□ 0.27
NDEL1-204ENST00000578172 TTC22Q5TAA0 569 aa16.72■□□□□ 0.27
NDEL1-204ENST00000578172 MSH6P52701 1360 aa16.72■□□□□ 0.27
NDEL1-204ENST00000578172 CEP85Q6P2H3 762 aa16.72■□□□□ 0.27
NDEL1-204ENST00000578172 SHROOM2Q13796 1616 aa16.71■□□□□ 0.27
NDEL1-204ENST00000578172 BAG4O95429 457 aaKnown RBP16.71■□□□□ 0.27
NDEL1-204ENST00000578172 NAP1L2Q9ULW6 460 aaPredicted RBP16.71■□□□□ 0.27
NDEL1-204ENST00000578172 TTC21BQ7Z4L5 1316 aa16.7■□□□□ 0.26
NDEL1-204ENST00000578172 RIMS2Q9UQ26 1411 aa16.7■□□□□ 0.26
NDEL1-204ENST00000578172 HDGFL1Q5TGJ6 251 aa16.7■□□□□ 0.26
NDEL1-204ENST00000578172 A0A0G2JS52 829 aa16.7■□□□□ 0.26
NDEL1-204ENST00000578172 JARID2Q92833 1246 aaPredicted RBP16.7■□□□□ 0.26
NDEL1-204ENST00000578172 AMOTL2Q9Y2J4 779 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms