RNA–Protein interactions for RNA: ENST00000574872.1

PFN1-203, Transcript of profilin 1, humanhuman

TSL 2 BASIC

Gene PFN1, Length 1,173 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-203ENST00000574872 LTN1O94822 1766 aa22.22■■□□□ 1.15
PFN1-203ENST00000574872 TRPC5Q9UL62 973 aaPredicted RBP22.21■■□□□ 1.15
PFN1-203ENST00000574872 AXIN2Q9Y2T1 843 aa22.21■■□□□ 1.15
PFN1-203ENST00000574872 CCDC9Q9Y3X0 531 aaKnown RBP22.2■■□□□ 1.14
PFN1-203ENST00000574872 ATRNO75882 1429 aa22.2■■□□□ 1.14
PFN1-203ENST00000574872 COL18A1P39060 1754 aa22.2■■□□□ 1.14
PFN1-203ENST00000574872 EVA1CP58658 441 aa22.19■■□□□ 1.14
PFN1-203ENST00000574872 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.19■■□□□ 1.14
PFN1-203ENST00000574872 AMPHP49418 695 aa22.18■■□□□ 1.14
PFN1-203ENST00000574872 EMILIN1Q9Y6C2 1016 aa22.18■■□□□ 1.14
PFN1-203ENST00000574872 COL5A2P05997 1499 aaPredicted RBP22.17■■□□□ 1.14
PFN1-203ENST00000574872 VPS72Q15906 364 aa22.17■■□□□ 1.14
PFN1-203ENST00000574872 PPM1GO15355 546 aaPredicted RBP22.16■■□□□ 1.14
PFN1-203ENST00000574872 LARP1Q6PKG0 1096 aaKnown RBP22.16■■□□□ 1.14
PFN1-203ENST00000574872 RGPD5Q99666 1765 aa22.15■■□□□ 1.14
PFN1-203ENST00000574872 NPC1L1Q9UHC9 1359 aa22.15■■□□□ 1.14
PFN1-203ENST00000574872 IP6K1Q92551 441 aa22.15■■□□□ 1.14
PFN1-203ENST00000574872 ABCC6O95255 1503 aa22.15■■□□□ 1.14
PFN1-203ENST00000574872 CSB-PGBD3P0DP91 1061 aa22.14■■□□□ 1.13
PFN1-203ENST00000574872 RXRBP28702 533 aa22.14■■□□□ 1.13
PFN1-203ENST00000574872 HOXC9P31274 260 aa22.14■■□□□ 1.13
PFN1-203ENST00000574872 LTV1Q96GA3 475 aaPredicted RBP22.14■■□□□ 1.13
PFN1-203ENST00000574872 GJD4Q96KN9 370 aaPredicted RBP22.14■■□□□ 1.13
PFN1-203ENST00000574872 PEAK1Q9H792 1746 aa22.14■■□□□ 1.13
PFN1-203ENST00000574872 RBM6P78332 1123 aaKnown RBP22.13■■□□□ 1.13
PFN1-203ENST00000574872 USP35Q9P2H5 1018 aa22.13■■□□□ 1.13
PFN1-203ENST00000574872 POLKQ9UBT6 870 aa22.13■■□□□ 1.13
PFN1-203ENST00000574872 RTL1A6NKG5 1358 aa22.12■■□□□ 1.13
PFN1-203ENST00000574872 ANKRD24Q8TF21 1146 aa22.12■■□□□ 1.13
PFN1-203ENST00000574872 SPATA31A5Q5VU36 1347 aa22.11■■□□□ 1.13
PFN1-203ENST00000574872 SPATA31A7Q8IWB4 1347 aa22.11■■□□□ 1.13
PFN1-203ENST00000574872 BLMP54132 1417 aaPredicted RBP22.11■■□□□ 1.13
PFN1-203ENST00000574872 GLI3P10071 1580 aa22.11■■□□□ 1.13
PFN1-203ENST00000574872 FLT4P35916 1363 aa22.11■■□□□ 1.13
PFN1-203ENST00000574872 MAP2P11137 1827 aaKnown RBP22.1■■□□□ 1.13
PFN1-203ENST00000574872 ERBB3P21860 1342 aa22.1■■□□□ 1.13
PFN1-203ENST00000574872 WDR17Q8IZU2 1322 aa22.1■■□□□ 1.13
PFN1-203ENST00000574872 HSP90AB2PQ58FF8 381 aa22.1■■□□□ 1.13
PFN1-203ENST00000574872 TOM1L2Q6ZVM7 507 aa22.1■■□□□ 1.13
PFN1-203ENST00000574872 SPATA31A1Q5TZJ5 1347 aa22.08■■□□□ 1.13
PFN1-203ENST00000574872 CRB1P82279 1406 aa22.08■■□□□ 1.13
PFN1-203ENST00000574872 ILDR2Q71H61 639 aa22.08■■□□□ 1.13
PFN1-203ENST00000574872 FAM98CQ17RN3 349 aaKnown RBP22.07■■□□□ 1.12
PFN1-203ENST00000574872 NLRP2Q9NX02 1062 aa22.07■■□□□ 1.12
PFN1-203ENST00000574872 KIF24Q5T7B8 1368 aa22.07■■□□□ 1.12
PFN1-203ENST00000574872 INSRP06213 1382 aa22.06■■□□□ 1.12
PFN1-203ENST00000574872 RGS12O14924 1447 aa22.06■■□□□ 1.12
PFN1-203ENST00000574872 SMG6Q86US8 1419 aaKnown RBP22.06■■□□□ 1.12
PFN1-203ENST00000574872 A0A0G2JS52 829 aa22.05■■□□□ 1.12
PFN1-203ENST00000574872 MYT1Q01538 1121 aa22.05■■□□□ 1.12
PFN1-203ENST00000574872 TCP11L2Q8N4U5 519 aa22.04■■□□□ 1.12
PFN1-203ENST00000574872 MTHFSP49914 203 aa22.03■■□□□ 1.12
PFN1-203ENST00000574872 CARD10Q9BWT7 1032 aa22.03■■□□□ 1.12
PFN1-203ENST00000574872 CDK12Q9NYV4 1490 aaPredicted RBP22.03■■□□□ 1.12
PFN1-203ENST00000574872 PARD3Q8TEW0 1356 aa22■■□□□ 1.11
PFN1-203ENST00000574872 SEPT12Q8IYM1 358 aa22■■□□□ 1.11
PFN1-203ENST00000574872 PPP2R1AP30153 589 aa21.99■■□□□ 1.11
PFN1-203ENST00000574872 EIF4A2Q14240 407 aaKnown RBP21.99■■□□□ 1.11
PFN1-203ENST00000574872 USHBP1Q8N6Y0 703 aa21.99■■□□□ 1.11
PFN1-203ENST00000574872 THRAP3Q9Y2W1 955 aaKnown RBP21.99■■□□□ 1.11
PFN1-203ENST00000574872 RGPD2P0DJD1 1756 aa21.99■■□□□ 1.11
PFN1-203ENST00000574872 FAM208AQ9UK61 1670 aaKnown RBP21.98■■□□□ 1.11
PFN1-203ENST00000574872 NBPF6Q5VWK0 638 aa21.98■■□□□ 1.11
PFN1-203ENST00000574872 BARGINQ6ZT62 677 aa21.98■■□□□ 1.11
PFN1-203ENST00000574872 NBPF4Q96M43 638 aa21.98■■□□□ 1.11
PFN1-203ENST00000574872 ONECUT3O60422 494 aaPredicted RBP21.97■■□□□ 1.11
PFN1-203ENST00000574872 THSD7AQ9UPZ6 1657 aa21.96■■□□□ 1.11
PFN1-203ENST00000574872 RALBP1Q15311 655 aa21.95■■□□□ 1.1
PFN1-203ENST00000574872 EYA1Q99502 592 aa21.94■■□□□ 1.1
PFN1-203ENST00000574872 DISP2A7MBM2 1401 aa21.93■■□□□ 1.1
PFN1-203ENST00000574872 WNK3Q9BYP7 1800 aa21.92■■□□□ 1.1
PFN1-203ENST00000574872 IL2RBP14784 551 aa21.92■■□□□ 1.1
PFN1-203ENST00000574872 IL13P35225 146 aa21.91■■□□□ 1.1
PFN1-203ENST00000574872 PRKRIP1Q9H875 184 aaPredicted RBP21.91■■□□□ 1.1
PFN1-203ENST00000574872 BRWD3Q6RI45 1802 aa21.91■■□□□ 1.1
PFN1-203ENST00000574872 COL3A1P02461 1466 aaPredicted RBP21.9■■□□□ 1.1
PFN1-203ENST00000574872 DIAPH1O60610 1272 aaKnown RBP21.9■■□□□ 1.1
PFN1-203ENST00000574872 CFAP53Q96M91 514 aa21.9■■□□□ 1.1
PFN1-203ENST00000574872 LRRC37A3O60309 1634 aa21.89■■□□□ 1.09
PFN1-203ENST00000574872 KRT27Q7Z3Y8 459 aa21.89■■□□□ 1.09
PFN1-203ENST00000574872 CDCA7Q9BWT1 371 aaPredicted RBP21.89■■□□□ 1.09
PFN1-203ENST00000574872 MEGF6O75095 1541 aa21.89■■□□□ 1.09
PFN1-203ENST00000574872 IGSF1Q8N6C5 1336 aa21.88■■□□□ 1.09
PFN1-203ENST00000574872 MYBBP1AQ9BQG0 1328 aaKnown RBP21.88■■□□□ 1.09
PFN1-203ENST00000574872 DDB1Q16531 1140 aa21.88■■□□□ 1.09
PFN1-203ENST00000574872 FAM182BQ5T319 152 aa21.88■■□□□ 1.09
PFN1-203ENST00000574872 PARP4Q9UKK3 1724 aaKnown RBP21.88■■□□□ 1.09
PFN1-203ENST00000574872 PDE3BQ13370 1112 aa21.87■■□□□ 1.09
PFN1-203ENST00000574872 RAPGEF4Q8WZA2 1011 aa21.87■■□□□ 1.09
PFN1-203ENST00000574872 AEBP1Q8IUX7 1158 aa21.86■■□□□ 1.09
PFN1-203ENST00000574872 NCAPD2Q15021 1401 aa21.86■■□□□ 1.09
PFN1-203ENST00000574872 EXOC5O00471 708 aa21.85■■□□□ 1.09
PFN1-203ENST00000574872 U2SURPO15042 1029 aaKnown RBP21.85■■□□□ 1.09
PFN1-203ENST00000574872 TNS2Q63HR2 1409 aa21.85■■□□□ 1.09
PFN1-203ENST00000574872 ANP32CO43423 234 aa21.84■■□□□ 1.09
PFN1-203ENST00000574872 TATP17735 454 aaPredicted RBP21.84■■□□□ 1.09
PFN1-203ENST00000574872 SULT6B1Q6IMI4 303 aa21.84■■□□□ 1.09
PFN1-203ENST00000574872 RGPD1P0DJD0 1748 aa21.83■■□□□ 1.09
PFN1-203ENST00000574872 OVOS2A0A0G2JMS6 1433 aa21.83■■□□□ 1.09
PFN1-203ENST00000574872 HMOX1P09601 288 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms