RNA–Protein interactions for RNA: ENST00000572116.1

ATP2A3-210, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 1 (best)

Gene ATP2A3, Length 429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-210ENST00000572116 COL5A2P05997 1499 aaPredicted RBP15.84■□□□□ 0.13
ATP2A3-210ENST00000572116 PER1O15534 1290 aaPredicted RBP15.83■□□□□ 0.12
ATP2A3-210ENST00000572116 FBLN1P23142 703 aa15.82■□□□□ 0.12
ATP2A3-210ENST00000572116 QTRT2Q9H974 415 aaKnown RBP15.82■□□□□ 0.12
ATP2A3-210ENST00000572116 TRPC5Q9UL62 973 aaPredicted RBP15.82■□□□□ 0.12
ATP2A3-210ENST00000572116 AMER1Q5JTC6 1135 aaPredicted RBP15.81■□□□□ 0.12
ATP2A3-210ENST00000572116 STRN4Q9NRL3 753 aa15.81■□□□□ 0.12
ATP2A3-210ENST00000572116 MAP3K19Q56UN5 1328 aa15.8■□□□□ 0.12
ATP2A3-210ENST00000572116 KAT6BQ8WYB5 2073 aa15.8■□□□□ 0.12
ATP2A3-210ENST00000572116 PARP4Q9UKK3 1724 aaKnown RBP15.8■□□□□ 0.12
ATP2A3-210ENST00000572116 BLMP54132 1417 aaPredicted RBP15.79■□□□□ 0.12
ATP2A3-210ENST00000572116 RTL1A6NKG5 1358 aa15.79■□□□□ 0.12
ATP2A3-210ENST00000572116 ZNF316A6NFI3 1004 aaPredicted RBP15.79■□□□□ 0.12
ATP2A3-210ENST00000572116 TNNT2P45379 298 aaPredicted RBP15.79■□□□□ 0.12
ATP2A3-210ENST00000572116 EVA1CP58658 441 aa15.79■□□□□ 0.12
ATP2A3-210ENST00000572116 DDX10Q13206 875 aaKnown RBP15.79■□□□□ 0.12
ATP2A3-210ENST00000572116 RRS1Q15050 365 aaKnown RBP15.79■□□□□ 0.12
ATP2A3-210ENST00000572116 CC2D1BQ5T0F9 858 aaKnown RBP15.79■□□□□ 0.12
ATP2A3-210ENST00000572116 MORC1Q86VD1 984 aa15.79■□□□□ 0.12
ATP2A3-210ENST00000572116 AXIN2Q9Y2T1 843 aa15.79■□□□□ 0.12
ATP2A3-210ENST00000572116 CCDC9Q9Y3X0 531 aaKnown RBP15.79■□□□□ 0.12
ATP2A3-210ENST00000572116 THSD7AQ9UPZ6 1657 aa15.79■□□□□ 0.12
ATP2A3-210ENST00000572116 NPC1L1Q9UHC9 1359 aa15.78■□□□□ 0.12
ATP2A3-210ENST00000572116 AMPHP49418 695 aa15.78■□□□□ 0.12
ATP2A3-210ENST00000572116 CNGB1Q14028 1251 aaPredicted RBP15.78■□□□□ 0.12
ATP2A3-210ENST00000572116 VPS72Q15906 364 aa15.78■□□□□ 0.12
ATP2A3-210ENST00000572116 RXRBP28702 533 aa15.77■□□□□ 0.12
ATP2A3-210ENST00000572116 RBM6P78332 1123 aaKnown RBP15.77■□□□□ 0.12
ATP2A3-210ENST00000572116 VIRMAQ69YN4 1812 aaKnown RBP15.77■□□□□ 0.11
ATP2A3-210ENST00000572116 CRB1P82279 1406 aa15.77■□□□□ 0.11
ATP2A3-210ENST00000572116 HOXC9P31274 260 aa15.76■□□□□ 0.11
ATP2A3-210ENST00000572116 IP6K1Q92551 441 aa15.76■□□□□ 0.11
ATP2A3-210ENST00000572116 GJD4Q96KN9 370 aaPredicted RBP15.76■□□□□ 0.11
ATP2A3-210ENST00000572116 CDK12Q9NYV4 1490 aaPredicted RBP15.76■□□□□ 0.11
ATP2A3-210ENST00000572116 FLT4P35916 1363 aa15.75■□□□□ 0.11
ATP2A3-210ENST00000572116 KIF24Q5T7B8 1368 aa15.75■□□□□ 0.11
ATP2A3-210ENST00000572116 SPATA31A5Q5VU36 1347 aa15.75■□□□□ 0.11
ATP2A3-210ENST00000572116 SPATA31A7Q8IWB4 1347 aa15.75■□□□□ 0.11
ATP2A3-210ENST00000572116 LARP1Q6PKG0 1096 aaKnown RBP15.75■□□□□ 0.11
ATP2A3-210ENST00000572116 EMILIN1Q9Y6C2 1016 aa15.75■□□□□ 0.11
ATP2A3-210ENST00000572116 SMG6Q86US8 1419 aaKnown RBP15.75■□□□□ 0.11
ATP2A3-210ENST00000572116 LRRC37A3O60309 1634 aa15.75■□□□□ 0.11
ATP2A3-210ENST00000572116 WDR17Q8IZU2 1322 aa15.74■□□□□ 0.11
ATP2A3-210ENST00000572116 PPM1GO15355 546 aaPredicted RBP15.74■□□□□ 0.11
ATP2A3-210ENST00000572116 CSB-PGBD3P0DP91 1061 aa15.74■□□□□ 0.11
ATP2A3-210ENST00000572116 RGS12O14924 1447 aa15.74■□□□□ 0.11
ATP2A3-210ENST00000572116 SBF2Q86WG5 1849 aa15.73■□□□□ 0.11
ATP2A3-210ENST00000572116 ERBB3P21860 1342 aa15.73■□□□□ 0.11
ATP2A3-210ENST00000572116 SPATA31A1Q5TZJ5 1347 aa15.73■□□□□ 0.11
ATP2A3-210ENST00000572116 ANKRD24Q8TF21 1146 aa15.73■□□□□ 0.11
ATP2A3-210ENST00000572116 POLKQ9UBT6 870 aa15.73■□□□□ 0.11
ATP2A3-210ENST00000572116 RGPD1P0DJD0 1748 aa15.73■□□□□ 0.11
ATP2A3-210ENST00000572116 SHANK3Q9BYB0 1731 aa15.73■□□□□ 0.11
ATP2A3-210ENST00000572116 TOM1L2Q6ZVM7 507 aa15.72■□□□□ 0.11
ATP2A3-210ENST00000572116 LTV1Q96GA3 475 aaPredicted RBP15.72■□□□□ 0.11
ATP2A3-210ENST00000572116 USP35Q9P2H5 1018 aa15.72■□□□□ 0.11
ATP2A3-210ENST00000572116 INSRP06213 1382 aa15.72■□□□□ 0.11
ATP2A3-210ENST00000572116 ILDR2Q71H61 639 aa15.71■□□□□ 0.11
ATP2A3-210ENST00000572116 HSP90AB2PQ58FF8 381 aa15.7■□□□□ 0.1
ATP2A3-210ENST00000572116 EP400Q96L91 3159 aa15.69■□□□□ 0.1
ATP2A3-210ENST00000572116 FAM98CQ17RN3 349 aaKnown RBP15.69■□□□□ 0.1
ATP2A3-210ENST00000572116 NLRP2Q9NX02 1062 aa15.69■□□□□ 0.1
ATP2A3-210ENST00000572116 PKD1L3Q7Z443 1732 aa15.68■□□□□ 0.1
ATP2A3-210ENST00000572116 A0A0G2JS52 829 aa15.68■□□□□ 0.1
ATP2A3-210ENST00000572116 MYT1Q01538 1121 aa15.68■□□□□ 0.1
ATP2A3-210ENST00000572116 TCP11L2Q8N4U5 519 aa15.68■□□□□ 0.1
ATP2A3-210ENST00000572116 PARD3Q8TEW0 1356 aa15.67■□□□□ 0.1
ATP2A3-210ENST00000572116 CARD10Q9BWT7 1032 aa15.67■□□□□ 0.1
ATP2A3-210ENST00000572116 THRAP3Q9Y2W1 955 aaKnown RBP15.67■□□□□ 0.1
ATP2A3-210ENST00000572116 BARGINQ6ZT62 677 aa15.66■□□□□ 0.1
ATP2A3-210ENST00000572116 ONECUT3O60422 494 aaPredicted RBP15.65■□□□□ 0.1
ATP2A3-210ENST00000572116 MTHFSP49914 203 aa15.65■□□□□ 0.1
ATP2A3-210ENST00000572116 SEPT12Q8IYM1 358 aa15.65■□□□□ 0.1
ATP2A3-210ENST00000572116 COL3A1P02461 1466 aaPredicted RBP15.65■□□□□ 0.1
ATP2A3-210ENST00000572116 DISP2A7MBM2 1401 aa15.64■□□□□ 0.09
ATP2A3-210ENST00000572116 PPP2R1AP30153 589 aa15.63■□□□□ 0.09
ATP2A3-210ENST00000572116 EIF4A2Q14240 407 aaKnown RBP15.63■□□□□ 0.09
ATP2A3-210ENST00000572116 NBPF6Q5VWK0 638 aa15.63■□□□□ 0.09
ATP2A3-210ENST00000572116 NBPF4Q96M43 638 aa15.63■□□□□ 0.09
ATP2A3-210ENST00000572116 ITGB4P16144 1822 aa15.63■□□□□ 0.09
ATP2A3-210ENST00000572116 USHBP1Q8N6Y0 703 aa15.62■□□□□ 0.09
ATP2A3-210ENST00000572116 DLG5Q8TDM6 1919 aa15.62■□□□□ 0.09
ATP2A3-210ENST00000572116 DOT1LQ8TEK3 1739 aa15.62■□□□□ 0.09
ATP2A3-210ENST00000572116 TNS1Q9HBL0 1735 aaKnown RBP15.62■□□□□ 0.09
ATP2A3-210ENST00000572116 NCAPD2Q15021 1401 aa15.61■□□□□ 0.09
ATP2A3-210ENST00000572116 RALBP1Q15311 655 aa15.61■□□□□ 0.09
ATP2A3-210ENST00000572116 CDCA7Q9BWT1 371 aaPredicted RBP15.61■□□□□ 0.09
ATP2A3-210ENST00000572116 MEGF6O75095 1541 aa15.61■□□□□ 0.09
ATP2A3-210ENST00000572116 IL2RBP14784 551 aa15.6■□□□□ 0.09
ATP2A3-210ENST00000572116 TNS2Q63HR2 1409 aa15.6■□□□□ 0.09
ATP2A3-210ENST00000572116 KRT27Q7Z3Y8 459 aa15.59■□□□□ 0.09
ATP2A3-210ENST00000572116 EYA1Q99502 592 aa15.59■□□□□ 0.09
ATP2A3-210ENST00000572116 DDB1Q16531 1140 aa15.58■□□□□ 0.08
ATP2A3-210ENST00000572116 CFAP53Q96M91 514 aa15.58■□□□□ 0.08
ATP2A3-210ENST00000572116 IGSF1Q8N6C5 1336 aa15.58■□□□□ 0.08
ATP2A3-210ENST00000572116 OVOS2A0A0G2JMS6 1433 aa15.58■□□□□ 0.08
ATP2A3-210ENST00000572116 SCN11AQ9UI33 1791 aa15.57■□□□□ 0.08
ATP2A3-210ENST00000572116 DIAPH1O60610 1272 aaKnown RBP15.57■□□□□ 0.08
ATP2A3-210ENST00000572116 IL13P35225 146 aa15.57■□□□□ 0.08
ATP2A3-210ENST00000572116 NHSQ6T4R5 1651 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms