RNA–Protein interactions for RNA: ENST00000570021.1

SIN3A-213, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 3

Gene SIN3A, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-213ENST00000570021 KIF21AQ7Z4S6 1674 aa9.89□□□□□ -0.83
SIN3A-213ENST00000570021 KCTD17Q8N5Z5 321 aa9.88□□□□□ -0.83
SIN3A-213ENST00000570021 KRT76Q01546 638 aa9.87□□□□□ -0.83
SIN3A-213ENST00000570021 CCDC116Q8IYX3 515 aa9.87□□□□□ -0.83
SIN3A-213ENST00000570021 NUTM2BA6NNL0 878 aaPredicted RBP9.86□□□□□ -0.83
SIN3A-213ENST00000570021 TTLL8A6PVC2 850 aa9.86□□□□□ -0.83
SIN3A-213ENST00000570021 NUTM2EB1AL46 878 aaPredicted RBP9.86□□□□□ -0.83
SIN3A-213ENST00000570021 NUTM2DQ5VT03 806 aaPredicted RBP9.86□□□□□ -0.83
SIN3A-213ENST00000570021 SH3BP5LQ7L8J4 393 aa9.86□□□□□ -0.83
SIN3A-213ENST00000570021 NUTM2AQ8IVF1 878 aaPredicted RBP9.86□□□□□ -0.83
SIN3A-213ENST00000570021 TMEM151AQ8N4L1 468 aa9.86□□□□□ -0.83
SIN3A-213ENST00000570021 GPR161Q8N6U8 529 aaKnown RBP9.86□□□□□ -0.83
SIN3A-213ENST00000570021 CNTNAP3BQ96NU0 1288 aa9.86□□□□□ -0.83
SIN3A-213ENST00000570021 CNTNAP3Q9BZ76 1288 aa9.86□□□□□ -0.83
SIN3A-213ENST00000570021 MAGEB6P1A0A0J9YX57 407 aa9.85□□□□□ -0.83
SIN3A-213ENST00000570021 RNF225M0QZC1 329 aaPredicted RBP9.85□□□□□ -0.83
SIN3A-213ENST00000570021 TRIM66O15016 1216 aa9.85□□□□□ -0.83
SIN3A-213ENST00000570021 PTSQ03393 145 aa9.85□□□□□ -0.83
SIN3A-213ENST00000570021 TUSC1Q2TAM9 212 aa9.85□□□□□ -0.83
SIN3A-213ENST00000570021 LAMC3Q9Y6N6 1575 aa9.84□□□□□ -0.83
SIN3A-213ENST00000570021 PDS5BQ9NTI5 1447 aa9.84□□□□□ -0.83
SIN3A-213ENST00000570021 QPCTQ16769 361 aa9.84□□□□□ -0.83
SIN3A-213ENST00000570021 HELBQ8NG08 1087 aaPredicted RBP9.84□□□□□ -0.83
SIN3A-213ENST00000570021 LIMD1Q9UGP4 676 aa9.84□□□□□ -0.83
SIN3A-213ENST00000570021 LILRB3O75022 631 aa9.83□□□□□ -0.84
SIN3A-213ENST00000570021 GDF11O95390 407 aa9.83□□□□□ -0.84
SIN3A-213ENST00000570021 RASSF7Q02833 373 aa9.83□□□□□ -0.84
SIN3A-213ENST00000570021 MYSM1Q5VVJ2 828 aa9.83□□□□□ -0.84
SIN3A-213ENST00000570021 GPKOWQ92917 476 aaPredicted RBP eCLIP9.83□□□□□ -0.84
SIN3A-213ENST00000570021 ADAMTS8Q9UP79 889 aa9.83□□□□□ -0.84
SIN3A-213ENST00000570021 BAZ1AQ9NRL2 1556 aaPredicted RBP9.83□□□□□ -0.84
SIN3A-213ENST00000570021 SMARCA4P51532 1647 aa9.82□□□□□ -0.84
SIN3A-213ENST00000570021 NANOS1Q8WY41 292 aaKnown RBP9.82□□□□□ -0.84
SIN3A-213ENST00000570021 BAZ1BQ9UIG0 1483 aaKnown RBP9.82□□□□□ -0.84
SIN3A-213ENST00000570021 FIGNL2A6NMB9 653 aa9.81□□□□□ -0.84
SIN3A-213ENST00000570021 AK7Q96M32 723 aa9.81□□□□□ -0.84
SIN3A-213ENST00000570021 CARD14Q9BXL6 1004 aa9.81□□□□□ -0.84
SIN3A-213ENST00000570021 COL25A1Q9BXS0 654 aaPredicted RBP9.81□□□□□ -0.84
SIN3A-213ENST00000570021 PGPEP1Q9NXJ5 209 aa9.81□□□□□ -0.84
SIN3A-213ENST00000570021 SPINT1O43278 529 aa9.8□□□□□ -0.84
SIN3A-213ENST00000570021 ERFEQ4G0M1 354 aa9.8□□□□□ -0.84
SIN3A-213ENST00000570021 PPP1R26Q5T8A7 1209 aaPredicted RBP9.8□□□□□ -0.84
SIN3A-213ENST00000570021 Q6ZVU0 165 aa9.8□□□□□ -0.84
SIN3A-213ENST00000570021 CCDC155Q8N6L0 562 aa9.8□□□□□ -0.84
SIN3A-213ENST00000570021 MRC2Q9UBG0 1479 aa9.79□□□□□ -0.84
SIN3A-213ENST00000570021 CBLBQ13191 982 aa9.79□□□□□ -0.84
SIN3A-213ENST00000570021 ZNF385CQ66K41 422 aaPredicted RBP9.78□□□□□ -0.84
SIN3A-213ENST00000570021 RIMBP3CA6NJZ7 1639 aa9.78□□□□□ -0.84
SIN3A-213ENST00000570021 RIMBP3BA6NNM3 1639 aa9.78□□□□□ -0.84
SIN3A-213ENST00000570021 RIMBP3Q9UFD9 1639 aa9.78□□□□□ -0.84
SIN3A-213ENST00000570021 WDR62O43379 1518 aa9.77□□□□□ -0.84
SIN3A-213ENST00000570021 RTL5Q5HYW3 569 aaPredicted RBP9.77□□□□□ -0.85
SIN3A-213ENST00000570021 RNFT1Q5M7Z0 435 aa9.77□□□□□ -0.85
SIN3A-213ENST00000570021 SVOPQ8N4V2 548 aa9.77□□□□□ -0.85
SIN3A-213ENST00000570021 CADPSQ9ULU8 1353 aa9.76□□□□□ -0.85
SIN3A-213ENST00000570021 SLC35F4A4IF30 521 aa9.76□□□□□ -0.85
SIN3A-213ENST00000570021 CDV3Q9UKY7 258 aaKnown RBP9.76□□□□□ -0.85
SIN3A-213ENST00000570021 SLURP2P0DP57 97 aa9.74□□□□□ -0.85
SIN3A-213ENST00000570021 ITGA6P23229 1130 aa9.74□□□□□ -0.85
SIN3A-213ENST00000570021 CLK2P49760 499 aaKnown RBP9.74□□□□□ -0.85
SIN3A-213ENST00000570021 DHX9Q08211 1270 aaKnown RBP9.74□□□□□ -0.85
SIN3A-213ENST00000570021 CYB5RLQ6IPT4 315 aa9.74□□□□□ -0.85
SIN3A-213ENST00000570021 PDXDC2PQ6P474 469 aa9.74□□□□□ -0.85
SIN3A-213ENST00000570021 SLC10A4Q96EP9 437 aa9.74□□□□□ -0.85
SIN3A-213ENST00000570021 KCTD15Q96SI1 283 aaPredicted RBP9.74□□□□□ -0.85
SIN3A-213ENST00000570021 ARHGAP9Q9BRR9 750 aa9.74□□□□□ -0.85
SIN3A-213ENST00000570021 SV2AQ7L0J3 742 aa9.73□□□□□ -0.85
SIN3A-213ENST00000570021 VWA5B2Q8N398 1253 aa9.73□□□□□ -0.85
SIN3A-213ENST00000570021 CDC14CA4D256 554 aa9.72□□□□□ -0.85
SIN3A-213ENST00000570021 PDE4DQ08499 809 aa9.72□□□□□ -0.85
SIN3A-213ENST00000570021 CTSOP43234 321 aaPredicted RBP9.71□□□□□ -0.86
SIN3A-213ENST00000570021 WHAMMQ8TF30 809 aa9.71□□□□□ -0.86
SIN3A-213ENST00000570021 DNMT3AQ9Y6K1 912 aaPredicted RBP9.71□□□□□ -0.86
SIN3A-213ENST00000570021 ARHGEF11O15085 1522 aa9.71□□□□□ -0.86
SIN3A-213ENST00000570021 PEG3Q9GZU2 1588 aa9.71□□□□□ -0.86
SIN3A-213ENST00000570021 ARHGEF15O94989 841 aa9.7□□□□□ -0.86
SIN3A-213ENST00000570021 RELBQ01201 579 aa9.7□□□□□ -0.86
SIN3A-213ENST00000570021 CTDSPL2Q05D32 466 aa9.7□□□□□ -0.86
SIN3A-213ENST00000570021 ZBTB33Q86T24 672 aa9.7□□□□□ -0.86
SIN3A-213ENST00000570021 AGBL1Q96MI9 1066 aa9.7□□□□□ -0.86
SIN3A-213ENST00000570021 FKBPLQ9UIM3 349 aa9.7□□□□□ -0.86
SIN3A-213ENST00000570021 IRS1P35568 1242 aa9.69□□□□□ -0.86
SIN3A-213ENST00000570021 INSM2Q96T92 566 aaPredicted RBP9.69□□□□□ -0.86
SIN3A-213ENST00000570021 RSPH6AQ9H0K4 717 aa9.69□□□□□ -0.86
SIN3A-213ENST00000570021 IGHA1P01876 353 aa9.68□□□□□ -0.86
SIN3A-213ENST00000570021 MARSP56192 900 aaKnown RBP9.68□□□□□ -0.86
SIN3A-213ENST00000570021 INTS6LQ5JSJ4 861 aaKnown RBP9.68□□□□□ -0.86
SIN3A-213ENST00000570021 KANK3Q6NY19 840 aa9.68□□□□□ -0.86
SIN3A-213ENST00000570021 POLMQ9NP87 494 aaPredicted RBP9.68□□□□□ -0.86
SIN3A-213ENST00000570021 MROH2BQ7Z745 1585 aa9.67□□□□□ -0.86
SIN3A-213ENST00000570021 ZC3H4Q9UPT8 1303 aaKnown RBP9.67□□□□□ -0.86
SIN3A-213ENST00000570021 GPAT2Q6NUI2 795 aa9.67□□□□□ -0.86
SIN3A-213ENST00000570021 RNF217Q8TC41 542 aa9.67□□□□□ -0.86
SIN3A-213ENST00000570021 POLR3EQ9NVU0 708 aa9.67□□□□□ -0.86
SIN3A-213ENST00000570021 SCARF2Q96GP6 870 aaPredicted RBP9.66□□□□□ -0.86
SIN3A-213ENST00000570021 SENP3-EIF4A1A0A087X0R7 540 aa9.65□□□□□ -0.86
SIN3A-213ENST00000570021 FOXK2Q01167 660 aa9.65□□□□□ -0.86
SIN3A-213ENST00000570021 LRRN4Q8WUT4 740 aa9.65□□□□□ -0.86
SIN3A-213ENST00000570021 CEP164Q9UPV0 1460 aa9.65□□□□□ -0.87
SIN3A-213ENST00000570021 ADAMTS2O95450 1211 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms