RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 DHX9Q08211 1270 aaKnown RBP6.38□□□□□ -1.39
SMG1-212ENST00000566328 KCNMA1Q12791 1236 aa6.38□□□□□ -1.39
SMG1-212ENST00000566328 PDXDC2PQ6P474 469 aa6.38□□□□□ -1.39
SMG1-212ENST00000566328 KCTD17Q8N5Z5 321 aa6.38□□□□□ -1.39
SMG1-212ENST00000566328 ERFEQ4G0M1 354 aa6.37□□□□□ -1.39
SMG1-212ENST00000566328 SLC10A4Q96EP9 437 aa6.37□□□□□ -1.39
SMG1-212ENST00000566328 ARHGAP9Q9BRR9 750 aa6.37□□□□□ -1.39
SMG1-212ENST00000566328 ZC3H4Q9UPT8 1303 aaKnown RBP6.36□□□□□ -1.39
SMG1-212ENST00000566328 PPP1R26Q5T8A7 1209 aaPredicted RBP6.36□□□□□ -1.39
SMG1-212ENST00000566328 ZBTB33Q86T24 672 aa6.36□□□□□ -1.39
SMG1-212ENST00000566328 SLC24A3Q9HC58 644 aa6.36□□□□□ -1.39
SMG1-212ENST00000566328 POLR3EQ9NVU0 708 aa6.36□□□□□ -1.39
SMG1-212ENST00000566328 PTSQ03393 145 aa6.35□□□□□ -1.39
SMG1-212ENST00000566328 CTDSPL2Q05D32 466 aa6.35□□□□□ -1.39
SMG1-212ENST00000566328 Q6ZVU0 165 aa6.35□□□□□ -1.39
SMG1-212ENST00000566328 KCTD15Q96SI1 283 aaPredicted RBP6.35□□□□□ -1.39
SMG1-212ENST00000566328 FKBPLQ9UIM3 349 aa6.35□□□□□ -1.39
SMG1-212ENST00000566328 SPINT1O43278 529 aa6.34□□□□□ -1.39
SMG1-212ENST00000566328 PNMA1Q8ND90 353 aa6.34□□□□□ -1.39
SMG1-212ENST00000566328 RNF225M0QZC1 329 aaPredicted RBP6.33□□□□□ -1.4
SMG1-212ENST00000566328 PTK2Q05397 1052 aa6.33□□□□□ -1.4
SMG1-212ENST00000566328 NANOS1Q8WY41 292 aaKnown RBP6.33□□□□□ -1.4
SMG1-212ENST00000566328 TRIM52Q96A61 297 aa6.33□□□□□ -1.4
SMG1-212ENST00000566328 ATP1B4Q9UN42 357 aaPredicted RBP6.33□□□□□ -1.4
SMG1-212ENST00000566328 GPSM3Q9Y4H4 160 aa6.33□□□□□ -1.4
SMG1-212ENST00000566328 FIGNL2A6NMB9 653 aa6.32□□□□□ -1.4
SMG1-212ENST00000566328 CBLBQ13191 982 aa6.32□□□□□ -1.4
SMG1-212ENST00000566328 SKIV2LQ15477 1246 aaKnown RBP6.32□□□□□ -1.4
SMG1-212ENST00000566328 NBPF20Q3BBV1 942 aa6.32□□□□□ -1.4
SMG1-212ENST00000566328 TMEM151AQ8N4L1 468 aa6.32□□□□□ -1.4
SMG1-212ENST00000566328 CCDC155Q8N6L0 562 aa6.32□□□□□ -1.4
SMG1-212ENST00000566328 LRRN4Q8WUT4 740 aa6.31□□□□□ -1.4
SMG1-212ENST00000566328 CNTNAP3BQ96NU0 1288 aa6.31□□□□□ -1.4
SMG1-212ENST00000566328 CNTNAP3Q9BZ76 1288 aa6.31□□□□□ -1.4
SMG1-212ENST00000566328 GDF11O95390 407 aa6.3□□□□□ -1.4
SMG1-212ENST00000566328 RASSF7Q02833 373 aa6.3□□□□□ -1.4
SMG1-212ENST00000566328 NR6A1Q15406 480 aa6.3□□□□□ -1.4
SMG1-212ENST00000566328 COL25A1Q9BXS0 654 aaPredicted RBP6.3□□□□□ -1.4
SMG1-212ENST00000566328 SLC35F4A4IF30 521 aa6.29□□□□□ -1.4
SMG1-212ENST00000566328 SH3D19Q5HYK7 790 aa6.29□□□□□ -1.4
SMG1-212ENST00000566328 SV2AQ7L0J3 742 aa6.29□□□□□ -1.4
SMG1-212ENST00000566328 GPR161Q8N6U8 529 aaKnown RBP6.29□□□□□ -1.4
SMG1-212ENST00000566328 DDRGK1Q96HY6 314 aa6.29□□□□□ -1.4
SMG1-212ENST00000566328 ITGA6P23229 1130 aa6.28□□□□□ -1.4
SMG1-212ENST00000566328 RELBQ01201 579 aa6.28□□□□□ -1.4
SMG1-212ENST00000566328 KRT76Q01546 638 aa6.28□□□□□ -1.4
SMG1-212ENST00000566328 INTS6LQ5JSJ4 861 aaKnown RBP6.28□□□□□ -1.4
SMG1-212ENST00000566328 PPP2R2DQ66LE6 453 aa6.28□□□□□ -1.4
SMG1-212ENST00000566328 ADAM32Q8TC27 787 aa6.28□□□□□ -1.4
SMG1-212ENST00000566328 INSM2Q96T92 566 aaPredicted RBP6.28□□□□□ -1.4
SMG1-212ENST00000566328 POLMQ9NP87 494 aaPredicted RBP6.28□□□□□ -1.4
SMG1-212ENST00000566328 ADAMTS8Q9UP79 889 aa6.28□□□□□ -1.4
SMG1-212ENST00000566328 CDC14CA4D256 554 aa6.27□□□□□ -1.41
SMG1-212ENST00000566328 AP1G2O75843 785 aa6.27□□□□□ -1.41
SMG1-212ENST00000566328 CTSOP43234 321 aaPredicted RBP6.27□□□□□ -1.41
SMG1-212ENST00000566328 SVOPQ8N4V2 548 aa6.27□□□□□ -1.41
SMG1-212ENST00000566328 AGBL1Q96MI9 1066 aa6.27□□□□□ -1.41
SMG1-212ENST00000566328 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.27□□□□□ -1.41
SMG1-212ENST00000566328 DZIP3Q86Y13 1208 aaKnown RBP6.26□□□□□ -1.41
SMG1-212ENST00000566328 VWA5B2Q8N398 1253 aa6.26□□□□□ -1.41
SMG1-212ENST00000566328 SLURP2P0DP57 97 aa6.25□□□□□ -1.41
SMG1-212ENST00000566328 PROCA1Q8NCQ7 364 aaPredicted RBP6.25□□□□□ -1.41
SMG1-212ENST00000566328 RNF217Q8TC41 542 aa6.25□□□□□ -1.41
SMG1-212ENST00000566328 KDM4CQ9H3R0 1056 aa6.25□□□□□ -1.41
SMG1-212ENST00000566328 ZNF395Q9H8N7 513 aaPredicted RBP6.25□□□□□ -1.41
SMG1-212ENST00000566328 ADH1AP07327 375 aa6.24□□□□□ -1.41
SMG1-212ENST00000566328 RAB15P59190 212 aa6.24□□□□□ -1.41
SMG1-212ENST00000566328 RNFT1Q5M7Z0 435 aa6.24□□□□□ -1.41
SMG1-212ENST00000566328 ZNF385CQ66K41 422 aaPredicted RBP6.24□□□□□ -1.41
SMG1-212ENST00000566328 SEPT12Q8IYM1 358 aa6.24□□□□□ -1.41
SMG1-212ENST00000566328 ZNF784Q8NCA9 323 aaPredicted RBP6.24□□□□□ -1.41
SMG1-212ENST00000566328 OCSTAMPQ9BR26 566 aa6.24□□□□□ -1.41
SMG1-212ENST00000566328 PTGIRP43119 386 aa6.23□□□□□ -1.41
SMG1-212ENST00000566328 MARSP56192 900 aaKnown RBP6.23□□□□□ -1.41
SMG1-212ENST00000566328 LYSMD3Q7Z3D4 306 aa6.23□□□□□ -1.41
SMG1-212ENST00000566328 TMPRSS4Q9NRS4 437 aa6.23□□□□□ -1.41
SMG1-212ENST00000566328 ERVH48-1M5A8F1 160 aa6.22□□□□□ -1.41
SMG1-212ENST00000566328 USP17L8P0C7I0 530 aa6.22□□□□□ -1.41
SMG1-212ENST00000566328 MAP3K10Q02779 954 aa6.22□□□□□ -1.41
SMG1-212ENST00000566328 CCDC125Q86Z20 511 aa6.22□□□□□ -1.41
SMG1-212ENST00000566328 SCARF2Q96GP6 870 aaPredicted RBP6.22□□□□□ -1.41
SMG1-212ENST00000566328 FAM117AQ9C073 453 aa6.22□□□□□ -1.41
SMG1-212ENST00000566328 SRSF11Q05519 484 aaKnown RBP6.21□□□□□ -1.42
SMG1-212ENST00000566328 KANK3Q6NY19 840 aa6.21□□□□□ -1.42
SMG1-212ENST00000566328 FOXR1Q6PIV2 292 aa6.21□□□□□ -1.42
SMG1-212ENST00000566328 GMCL1Q96IK5 515 aa6.21□□□□□ -1.42
SMG1-212ENST00000566328 ENAMQ9NRM1 1142 aa6.21□□□□□ -1.42
SMG1-212ENST00000566328 SENP3-EIF4A1A0A087X0R7 540 aa6.2□□□□□ -1.42
SMG1-212ENST00000566328 ESPNB1AK53 854 aa6.2□□□□□ -1.42
SMG1-212ENST00000566328 LILRA1O75019 489 aa6.2□□□□□ -1.42
SMG1-212ENST00000566328 ADAMTS2O95450 1211 aa6.2□□□□□ -1.42
SMG1-212ENST00000566328 IGHA1P01876 353 aa6.2□□□□□ -1.42
SMG1-212ENST00000566328 GPAT2Q6NUI2 795 aa6.2□□□□□ -1.42
SMG1-212ENST00000566328 EPS8L1Q8TE68 723 aa6.2□□□□□ -1.42
SMG1-212ENST00000566328 GPBP1L1Q9HC44 474 aaPredicted RBP6.2□□□□□ -1.42
SMG1-212ENST00000566328 DNMT3AQ9Y6K1 912 aaPredicted RBP6.2□□□□□ -1.42
SMG1-212ENST00000566328 ARHGEF15O94989 841 aa6.19□□□□□ -1.42
SMG1-212ENST00000566328 IRS1P35568 1242 aa6.19□□□□□ -1.42
SMG1-212ENST00000566328 ADD1P35611 737 aaKnown RBP6.19□□□□□ -1.42
SMG1-212ENST00000566328 RNF144AP50876 292 aaPredicted RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms