RNA–Protein interactions for RNA: ENST00000563009.5

EDC3-206, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 3

Gene EDC3, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-206ENST00000563009 COL5A2P05997 1499 aaPredicted RBP20.83■□□□□ 0.93
EDC3-206ENST00000563009 QTRT2Q9H974 415 aaKnown RBP20.83■□□□□ 0.93
EDC3-206ENST00000563009 AXIN2Q9Y2T1 843 aa20.83■□□□□ 0.93
EDC3-206ENST00000563009 ZBTB7CA1YPR0 619 aa20.82■□□□□ 0.92
EDC3-206ENST00000563009 VPS72Q15906 364 aa20.82■□□□□ 0.92
EDC3-206ENST00000563009 RGPD5Q99666 1765 aa20.82■□□□□ 0.92
EDC3-206ENST00000563009 RTL1A6NKG5 1358 aa20.81■□□□□ 0.92
EDC3-206ENST00000563009 KIF24Q5T7B8 1368 aa20.81■□□□□ 0.92
EDC3-206ENST00000563009 BLMP54132 1417 aaPredicted RBP20.8■□□□□ 0.92
EDC3-206ENST00000563009 DDX10Q13206 875 aaKnown RBP20.8■□□□□ 0.92
EDC3-206ENST00000563009 RRS1Q15050 365 aaKnown RBP20.8■□□□□ 0.92
EDC3-206ENST00000563009 MORC1Q86VD1 984 aa20.8■□□□□ 0.92
EDC3-206ENST00000563009 IP6K1Q92551 441 aa20.8■□□□□ 0.92
EDC3-206ENST00000563009 PEAK1Q9H792 1746 aa20.79■□□□□ 0.92
EDC3-206ENST00000563009 MAP2P11137 1827 aaKnown RBP20.79■□□□□ 0.92
EDC3-206ENST00000563009 CC2D1BQ5T0F9 858 aaKnown RBP20.79■□□□□ 0.92
EDC3-206ENST00000563009 GJD4Q96KN9 370 aaPredicted RBP20.78■□□□□ 0.92
EDC3-206ENST00000563009 GLI3P10071 1580 aa20.77■□□□□ 0.92
EDC3-206ENST00000563009 HOXC9P31274 260 aa20.77■□□□□ 0.92
EDC3-206ENST00000563009 EVA1CP58658 441 aa20.77■□□□□ 0.92
EDC3-206ENST00000563009 RBM6P78332 1123 aaKnown RBP20.77■□□□□ 0.92
EDC3-206ENST00000563009 STRN4Q9NRL3 753 aa20.77■□□□□ 0.92
EDC3-206ENST00000563009 POLKQ9UBT6 870 aa20.77■□□□□ 0.92
EDC3-206ENST00000563009 SMG6Q86US8 1419 aaKnown RBP20.77■□□□□ 0.91
EDC3-206ENST00000563009 SPATA31A5Q5VU36 1347 aa20.77■□□□□ 0.91
EDC3-206ENST00000563009 SPATA31A7Q8IWB4 1347 aa20.77■□□□□ 0.91
EDC3-206ENST00000563009 FLT4P35916 1363 aa20.76■□□□□ 0.91
EDC3-206ENST00000563009 RXRBP28702 533 aa20.76■□□□□ 0.91
EDC3-206ENST00000563009 TNNT2P45379 298 aaPredicted RBP20.76■□□□□ 0.91
EDC3-206ENST00000563009 AMPHP49418 695 aa20.76■□□□□ 0.91
EDC3-206ENST00000563009 WDR17Q8IZU2 1322 aa20.76■□□□□ 0.91
EDC3-206ENST00000563009 LARP1Q6PKG0 1096 aaKnown RBP20.75■□□□□ 0.91
EDC3-206ENST00000563009 EMILIN1Q9Y6C2 1016 aa20.75■□□□□ 0.91
EDC3-206ENST00000563009 ERBB3P21860 1342 aa20.75■□□□□ 0.91
EDC3-206ENST00000563009 CDK12Q9NYV4 1490 aaPredicted RBP20.75■□□□□ 0.91
EDC3-206ENST00000563009 CRB1P82279 1406 aa20.74■□□□□ 0.91
EDC3-206ENST00000563009 SPATA31A1Q5TZJ5 1347 aa20.74■□□□□ 0.91
EDC3-206ENST00000563009 INSRP06213 1382 aa20.73■□□□□ 0.91
EDC3-206ENST00000563009 ANKRD24Q8TF21 1146 aa20.72■□□□□ 0.91
EDC3-206ENST00000563009 CCDC9Q9Y3X0 531 aaKnown RBP20.72■□□□□ 0.91
EDC3-206ENST00000563009 FAM208AQ9UK61 1670 aaKnown RBP20.72■□□□□ 0.91
EDC3-206ENST00000563009 HSP90AB2PQ58FF8 381 aa20.71■□□□□ 0.91
EDC3-206ENST00000563009 ONECUT3O60422 494 aaPredicted RBP20.7■□□□□ 0.9
EDC3-206ENST00000563009 PPM1GO15355 546 aaPredicted RBP20.69■□□□□ 0.9
EDC3-206ENST00000563009 CSB-PGBD3P0DP91 1061 aa20.69■□□□□ 0.9
EDC3-206ENST00000563009 TOM1L2Q6ZVM7 507 aa20.69■□□□□ 0.9
EDC3-206ENST00000563009 CARD10Q9BWT7 1032 aa20.69■□□□□ 0.9
EDC3-206ENST00000563009 PARD3Q8TEW0 1356 aa20.69■□□□□ 0.9
EDC3-206ENST00000563009 CNGB1Q14028 1251 aaPredicted RBP20.68■□□□□ 0.9
EDC3-206ENST00000563009 BARGINQ6ZT62 677 aa20.68■□□□□ 0.9
EDC3-206ENST00000563009 THRAP3Q9Y2W1 955 aaKnown RBP20.68■□□□□ 0.9
EDC3-206ENST00000563009 RGS12O14924 1447 aa20.68■□□□□ 0.9
EDC3-206ENST00000563009 TCP11L2Q8N4U5 519 aa20.67■□□□□ 0.9
EDC3-206ENST00000563009 THSD7AQ9UPZ6 1657 aa20.67■□□□□ 0.9
EDC3-206ENST00000563009 LTV1Q96GA3 475 aaPredicted RBP20.66■□□□□ 0.9
EDC3-206ENST00000563009 USP35Q9P2H5 1018 aa20.66■□□□□ 0.9
EDC3-206ENST00000563009 MTHFSP49914 203 aa20.65■□□□□ 0.9
EDC3-206ENST00000563009 FAM98CQ17RN3 349 aaKnown RBP20.65■□□□□ 0.9
EDC3-206ENST00000563009 WNK3Q9BYP7 1800 aa20.64■□□□□ 0.9
EDC3-206ENST00000563009 RGPD2P0DJD1 1756 aa20.64■□□□□ 0.9
EDC3-206ENST00000563009 NLRP2Q9NX02 1062 aa20.64■□□□□ 0.89
EDC3-206ENST00000563009 PPP2R1AP30153 589 aa20.63■□□□□ 0.89
EDC3-206ENST00000563009 DISP2A7MBM2 1401 aa20.62■□□□□ 0.89
EDC3-206ENST00000563009 SEPT12Q8IYM1 358 aa20.62■□□□□ 0.89
EDC3-206ENST00000563009 NCAPD2Q15021 1401 aa20.61■□□□□ 0.89
EDC3-206ENST00000563009 EIF4A2Q14240 407 aaKnown RBP20.61■□□□□ 0.89
EDC3-206ENST00000563009 RALBP1Q15311 655 aa20.61■□□□□ 0.89
EDC3-206ENST00000563009 NBPF6Q5VWK0 638 aa20.61■□□□□ 0.89
EDC3-206ENST00000563009 NBPF4Q96M43 638 aa20.61■□□□□ 0.89
EDC3-206ENST00000563009 PARP4Q9UKK3 1724 aaKnown RBP20.61■□□□□ 0.89
EDC3-206ENST00000563009 CDCA7Q9BWT1 371 aaPredicted RBP20.6■□□□□ 0.89
EDC3-206ENST00000563009 COL3A1P02461 1466 aaPredicted RBP20.59■□□□□ 0.89
EDC3-206ENST00000563009 BRWD3Q6RI45 1802 aa20.59■□□□□ 0.89
EDC3-206ENST00000563009 LRRC37A3O60309 1634 aa20.57■□□□□ 0.88
EDC3-206ENST00000563009 RGPD1P0DJD0 1748 aa20.57■□□□□ 0.88
EDC3-206ENST00000563009 IL13P35225 146 aa20.57■□□□□ 0.88
EDC3-206ENST00000563009 EYA1Q99502 592 aa20.57■□□□□ 0.88
EDC3-206ENST00000563009 PRKRIP1Q9H875 184 aaPredicted RBP20.56■□□□□ 0.88
EDC3-206ENST00000563009 IGSF1Q8N6C5 1336 aa20.55■□□□□ 0.88
EDC3-206ENST00000563009 A0A0G2JS52 829 aa20.55■□□□□ 0.88
EDC3-206ENST00000563009 IL2RBP14784 551 aa20.55■□□□□ 0.88
EDC3-206ENST00000563009 MYT1Q01538 1121 aa20.55■□□□□ 0.88
EDC3-206ENST00000563009 USHBP1Q8N6Y0 703 aa20.54■□□□□ 0.88
EDC3-206ENST00000563009 DIAPH1O60610 1272 aaKnown RBP20.53■□□□□ 0.88
EDC3-206ENST00000563009 CFAP53Q96M91 514 aa20.53■□□□□ 0.88
EDC3-206ENST00000563009 MEGF6O75095 1541 aa20.53■□□□□ 0.88
EDC3-206ENST00000563009 MYBBP1AQ9BQG0 1328 aaKnown RBP20.53■□□□□ 0.88
EDC3-206ENST00000563009 KRT27Q7Z3Y8 459 aa20.52■□□□□ 0.88
EDC3-206ENST00000563009 TNS2Q63HR2 1409 aa20.52■□□□□ 0.87
EDC3-206ENST00000563009 DDB1Q16531 1140 aa20.51■□□□□ 0.87
EDC3-206ENST00000563009 OVOS2A0A0G2JMS6 1433 aa20.51■□□□□ 0.87
EDC3-206ENST00000563009 KDRP35968 1356 aa20.5■□□□□ 0.87
EDC3-206ENST00000563009 PLEKHG2Q9H7P9 1386 aa20.49■□□□□ 0.87
EDC3-206ENST00000563009 RAPGEF4Q8WZA2 1011 aa20.49■□□□□ 0.87
EDC3-206ENST00000563009 EXOC5O00471 708 aa20.48■□□□□ 0.87
EDC3-206ENST00000563009 PDE3BQ13370 1112 aa20.48■□□□□ 0.87
EDC3-206ENST00000563009 EP400Q96L91 3159 aa20.48■□□□□ 0.87
EDC3-206ENST00000563009 TATP17735 454 aaPredicted RBP20.47■□□□□ 0.87
EDC3-206ENST00000563009 PKD1L3Q7Z443 1732 aa20.47■□□□□ 0.87
EDC3-206ENST00000563009 SHANK3Q9BYB0 1731 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms