RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 CDV3Q9UKY7 258 aaKnown RBP8.36□□□□□ -1.07
HDGFL3-202ENST00000562702 FIGNL2A6NMB9 653 aa8.35□□□□□ -1.07
HDGFL3-202ENST00000562702 SH3BP5LQ7L8J4 393 aa8.35□□□□□ -1.07
HDGFL3-202ENST00000562702 DHX9Q08211 1270 aaKnown RBP8.34□□□□□ -1.07
HDGFL3-202ENST00000562702 CCDC155Q8N6L0 562 aa8.34□□□□□ -1.07
HDGFL3-202ENST00000562702 GPR161Q8N6U8 529 aaKnown RBP8.34□□□□□ -1.07
HDGFL3-202ENST00000562702 AK7Q96M32 723 aa8.34□□□□□ -1.07
HDGFL3-202ENST00000562702 TRIM66O15016 1216 aa8.33□□□□□ -1.08
HDGFL3-202ENST00000562702 SPINT1O43278 529 aa8.33□□□□□ -1.08
HDGFL3-202ENST00000562702 GSK3AP49840 483 aa8.33□□□□□ -1.08
HDGFL3-202ENST00000562702 MARSP56192 900 aaKnown RBP8.33□□□□□ -1.08
HDGFL3-202ENST00000562702 KRT76Q01546 638 aa8.33□□□□□ -1.08
HDGFL3-202ENST00000562702 PPP1R26Q5T8A7 1209 aaPredicted RBP8.33□□□□□ -1.08
HDGFL3-202ENST00000562702 LILRB3O75022 631 aa8.32□□□□□ -1.08
HDGFL3-202ENST00000562702 MYSM1Q5VVJ2 828 aa8.32□□□□□ -1.08
HDGFL3-202ENST00000562702 SV2AQ7L0J3 742 aa8.32□□□□□ -1.08
HDGFL3-202ENST00000562702 SLC10A4Q96EP9 437 aa8.32□□□□□ -1.08
HDGFL3-202ENST00000562702 CDC14CA4D256 554 aa8.31□□□□□ -1.08
HDGFL3-202ENST00000562702 IGHA1P01876 353 aa8.31□□□□□ -1.08
HDGFL3-202ENST00000562702 QPCTQ16769 361 aa8.31□□□□□ -1.08
HDGFL3-202ENST00000562702 ERFEQ4G0M1 354 aa8.31□□□□□ -1.08
HDGFL3-202ENST00000562702 Q6ZVU0 165 aa8.31□□□□□ -1.08
HDGFL3-202ENST00000562702 LIMD1Q9UGP4 676 aa8.31□□□□□ -1.08
HDGFL3-202ENST00000562702 ITGA6P23229 1130 aa8.3□□□□□ -1.08
HDGFL3-202ENST00000562702 ZNF385CQ66K41 422 aaPredicted RBP8.3□□□□□ -1.08
HDGFL3-202ENST00000562702 KANK3Q6NY19 840 aa8.3□□□□□ -1.08
HDGFL3-202ENST00000562702 ZBTB33Q86T24 672 aa8.3□□□□□ -1.08
HDGFL3-202ENST00000562702 SCARF2Q96GP6 870 aaPredicted RBP8.3□□□□□ -1.08
HDGFL3-202ENST00000562702 ARHGAP9Q9BRR9 750 aa8.3□□□□□ -1.08
HDGFL3-202ENST00000562702 RSPH6AQ9H0K4 717 aa8.3□□□□□ -1.08
HDGFL3-202ENST00000562702 DNMT3AQ9Y6K1 912 aaPredicted RBP8.3□□□□□ -1.08
HDGFL3-202ENST00000562702 SLC35F4A4IF30 521 aa8.29□□□□□ -1.08
HDGFL3-202ENST00000562702 FOXK2Q01167 660 aa8.29□□□□□ -1.08
HDGFL3-202ENST00000562702 CBLBQ13191 982 aa8.29□□□□□ -1.08
HDGFL3-202ENST00000562702 PDXDC2PQ6P474 469 aa8.29□□□□□ -1.08
HDGFL3-202ENST00000562702 VWA5B2Q8N398 1253 aa8.29□□□□□ -1.08
HDGFL3-202ENST00000562702 KCTD15Q96SI1 283 aaPredicted RBP8.29□□□□□ -1.08
HDGFL3-202ENST00000562702 SLURP2P0DP57 97 aa8.28□□□□□ -1.08
HDGFL3-202ENST00000562702 IRS1P35568 1242 aa8.28□□□□□ -1.08
HDGFL3-202ENST00000562702 MAP3K10Q02779 954 aa8.28□□□□□ -1.08
HDGFL3-202ENST00000562702 TRIM52Q96A61 297 aa8.28□□□□□ -1.08
HDGFL3-202ENST00000562702 CLK2P49760 499 aaKnown RBP8.27□□□□□ -1.09
HDGFL3-202ENST00000562702 GPAT2Q6NUI2 795 aa8.27□□□□□ -1.09
HDGFL3-202ENST00000562702 POLMQ9NP87 494 aaPredicted RBP8.27□□□□□ -1.09
HDGFL3-202ENST00000562702 RELBQ01201 579 aa8.26□□□□□ -1.09
HDGFL3-202ENST00000562702 RTL5Q5HYW3 569 aaPredicted RBP8.26□□□□□ -1.09
HDGFL3-202ENST00000562702 ENAMQ9NRM1 1142 aa8.26□□□□□ -1.09
HDGFL3-202ENST00000562702 ZC3H4Q9UPT8 1303 aaKnown RBP8.26□□□□□ -1.09
HDGFL3-202ENST00000562702 RNFT1Q5M7Z0 435 aa8.25□□□□□ -1.09
HDGFL3-202ENST00000562702 PNMA1Q8ND90 353 aa8.25□□□□□ -1.09
HDGFL3-202ENST00000562702 FKBPLQ9UIM3 349 aa8.25□□□□□ -1.09
HDGFL3-202ENST00000562702 PTK2Q05397 1052 aa8.24□□□□□ -1.09
HDGFL3-202ENST00000562702 PDE4DQ08499 809 aa8.24□□□□□ -1.09
HDGFL3-202ENST00000562702 NBPF20Q3BBV1 942 aa8.24□□□□□ -1.09
HDGFL3-202ENST00000562702 INSM2Q96T92 566 aaPredicted RBP8.24□□□□□ -1.09
HDGFL3-202ENST00000562702 ARHGEF15O94989 841 aa8.23□□□□□ -1.09
HDGFL3-202ENST00000562702 CTSOP43234 321 aaPredicted RBP8.23□□□□□ -1.09
HDGFL3-202ENST00000562702 AGBL1Q96MI9 1066 aa8.23□□□□□ -1.09
HDGFL3-202ENST00000562702 ADAMTS2O95450 1211 aa8.22□□□□□ -1.09
HDGFL3-202ENST00000562702 INTS6LQ5JSJ4 861 aaKnown RBP8.22□□□□□ -1.09
HDGFL3-202ENST00000562702 WHAMMQ8TF30 809 aa8.22□□□□□ -1.09
HDGFL3-202ENST00000562702 SRSF11Q05519 484 aaKnown RBP8.21□□□□□ -1.1
HDGFL3-202ENST00000562702 CTDSPL2Q05D32 466 aa8.21□□□□□ -1.1
HDGFL3-202ENST00000562702 POLR3EQ9NVU0 708 aa8.21□□□□□ -1.1
HDGFL3-202ENST00000562702 GPSM3Q9Y4H4 160 aa8.21□□□□□ -1.1
HDGFL3-202ENST00000562702 FOXR1Q6PIV2 292 aa8.2□□□□□ -1.1
HDGFL3-202ENST00000562702 RNF217Q8TC41 542 aa8.2□□□□□ -1.1
HDGFL3-202ENST00000562702 ZNF395Q9H8N7 513 aaPredicted RBP8.2□□□□□ -1.1
HDGFL3-202ENST00000562702 ATP1B4Q9UN42 357 aaPredicted RBP8.2□□□□□ -1.1
HDGFL3-202ENST00000562702 PHF20L1A8MW92 1017 aa8.19□□□□□ -1.1
HDGFL3-202ENST00000562702 ADH1AP07327 375 aa8.18□□□□□ -1.1
HDGFL3-202ENST00000562702 LYSMD3Q7Z3D4 306 aa8.18□□□□□ -1.1
HDGFL3-202ENST00000562702 PODNQ7Z5L7 613 aa8.18□□□□□ -1.1
HDGFL3-202ENST00000562702 GMCL1Q96IK5 515 aa8.18□□□□□ -1.1
HDGFL3-202ENST00000562702 PTGIRP43119 386 aa8.16□□□□□ -1.1
HDGFL3-202ENST00000562702 RAB15P59190 212 aa8.16□□□□□ -1.1
HDGFL3-202ENST00000562702 NR6A1Q15406 480 aa8.16□□□□□ -1.1
HDGFL3-202ENST00000562702 LYPD4Q6UWN0 246 aa8.16□□□□□ -1.1
HDGFL3-202ENST00000562702 DZIP3Q86Y13 1208 aaKnown RBP8.16□□□□□ -1.1
HDGFL3-202ENST00000562702 ADAM32Q8TC27 787 aa8.16□□□□□ -1.1
HDGFL3-202ENST00000562702 LRRN4Q8WUT4 740 aa8.16□□□□□ -1.1
HDGFL3-202ENST00000562702 SENP3-EIF4A1A0A087X0R7 540 aa8.15□□□□□ -1.1
HDGFL3-202ENST00000562702 CELA2BP08218 269 aaPredicted RBP8.15□□□□□ -1.1
HDGFL3-202ENST00000562702 ZNF784Q8NCA9 323 aaPredicted RBP8.15□□□□□ -1.1
HDGFL3-202ENST00000562702 MSTNO14793 375 aa8.14□□□□□ -1.11
HDGFL3-202ENST00000562702 BEND7Q8N7W2 519 aaPredicted RBP8.14□□□□□ -1.11
HDGFL3-202ENST00000562702 TMPRSS4Q9NRS4 437 aa8.14□□□□□ -1.11
HDGFL3-202ENST00000562702 PPP2R2DQ66LE6 453 aa8.13□□□□□ -1.11
HDGFL3-202ENST00000562702 NEDD1Q8NHV4 660 aa8.13□□□□□ -1.11
HDGFL3-202ENST00000562702 MBIPQ9NS73 344 aa8.13□□□□□ -1.11
HDGFL3-202ENST00000562702 H7C1W4 665 aa8.12□□□□□ -1.11
HDGFL3-202ENST00000562702 FOXD4L5Q5VV16 416 aaPredicted RBP8.12□□□□□ -1.11
HDGFL3-202ENST00000562702 PRICKLE2Q7Z3G6 844 aa8.12□□□□□ -1.11
HDGFL3-202ENST00000562702 SEPT12Q8IYM1 358 aa8.12□□□□□ -1.11
HDGFL3-202ENST00000562702 NSFL1CQ9UNZ2 370 aaKnown RBP8.12□□□□□ -1.11
HDGFL3-202ENST00000562702 ERVH48-1M5A8F1 160 aa8.11□□□□□ -1.11
HDGFL3-202ENST00000562702 SKIV2LQ15477 1246 aaKnown RBP8.11□□□□□ -1.11
HDGFL3-202ENST00000562702 TRIM22Q8IYM9 498 aa8.11□□□□□ -1.11
HDGFL3-202ENST00000562702 TRERF1Q96PN7 1200 aa8.11□□□□□ -1.11
HDGFL3-202ENST00000562702 AP1G2O75843 785 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms