RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 RRS1Q15050 365 aaKnown RBP30.51■■■□□ 2.47
SYNGR3-202ENST00000562045 QTRT2Q9H974 415 aaKnown RBP30.51■■■□□ 2.47
SYNGR3-202ENST00000562045 ATRNO75882 1429 aa30.51■■■□□ 2.47
SYNGR3-202ENST00000562045 MAP3K19Q56UN5 1328 aa30.5■■■□□ 2.47
SYNGR3-202ENST00000562045 MAP2P11137 1827 aaKnown RBP30.49■■■□□ 2.47
SYNGR3-202ENST00000562045 TNNT2P45379 298 aaPredicted RBP30.49■■■□□ 2.47
SYNGR3-202ENST00000562045 CNGB1Q14028 1251 aaPredicted RBP30.49■■■□□ 2.47
SYNGR3-202ENST00000562045 NSD2O96028 1365 aa30.49■■■□□ 2.47
SYNGR3-202ENST00000562045 PEAK1Q9H792 1746 aa30.48■■■□□ 2.47
SYNGR3-202ENST00000562045 CC2D1BQ5T0F9 858 aaKnown RBP30.47■■■□□ 2.47
SYNGR3-202ENST00000562045 COL5A2P05997 1499 aaPredicted RBP30.47■■■□□ 2.47
SYNGR3-202ENST00000562045 STRN4Q9NRL3 753 aa30.47■■■□□ 2.47
SYNGR3-202ENST00000562045 TRPC5Q9UL62 973 aaPredicted RBP30.46■■■□□ 2.47
SYNGR3-202ENST00000562045 GLI3P10071 1580 aa30.45■■■□□ 2.47
SYNGR3-202ENST00000562045 CCER2I3L3R5 266 aa30.44■■■□□ 2.46
SYNGR3-202ENST00000562045 NPC1L1Q9UHC9 1359 aa30.44■■■□□ 2.46
SYNGR3-202ENST00000562045 MORC1Q86VD1 984 aa30.43■■■□□ 2.46
SYNGR3-202ENST00000562045 EMILIN1Q9Y6C2 1016 aa30.43■■■□□ 2.46
SYNGR3-202ENST00000562045 ABCC6O95255 1503 aa30.43■■■□□ 2.46
SYNGR3-202ENST00000562045 RALBP1Q15311 655 aa30.42■■■□□ 2.46
SYNGR3-202ENST00000562045 VPS72Q15906 364 aa30.42■■■□□ 2.46
SYNGR3-202ENST00000562045 LARP1Q6PKG0 1096 aaKnown RBP30.42■■■□□ 2.46
SYNGR3-202ENST00000562045 ILDR2Q71H61 639 aa30.41■■■□□ 2.46
SYNGR3-202ENST00000562045 HOXC9P31274 260 aa30.39■■■□□ 2.46
SYNGR3-202ENST00000562045 EVA1CP58658 441 aa30.39■■■□□ 2.46
SYNGR3-202ENST00000562045 IP6K1Q92551 441 aa30.39■■■□□ 2.46
SYNGR3-202ENST00000562045 GJD4Q96KN9 370 aaPredicted RBP30.39■■■□□ 2.46
SYNGR3-202ENST00000562045 POLKQ9UBT6 870 aa30.39■■■□□ 2.45
SYNGR3-202ENST00000562045 PARD3Q8TEW0 1356 aa30.38■■■□□ 2.45
SYNGR3-202ENST00000562045 AMPHP49418 695 aa30.38■■■□□ 2.45
SYNGR3-202ENST00000562045 CCDC9Q9Y3X0 531 aaKnown RBP30.38■■■□□ 2.45
SYNGR3-202ENST00000562045 RXRBP28702 533 aa30.37■■■□□ 2.45
SYNGR3-202ENST00000562045 RBM6P78332 1123 aaKnown RBP30.36■■■□□ 2.45
SYNGR3-202ENST00000562045 SPATA31A5Q5VU36 1347 aa30.36■■■□□ 2.45
SYNGR3-202ENST00000562045 SPATA31A7Q8IWB4 1347 aa30.36■■■□□ 2.45
SYNGR3-202ENST00000562045 RGPD2P0DJD1 1756 aa30.35■■■□□ 2.45
SYNGR3-202ENST00000562045 BLMP54132 1417 aaPredicted RBP30.34■■■□□ 2.45
SYNGR3-202ENST00000562045 PPM1GO15355 546 aaPredicted RBP30.34■■■□□ 2.45
SYNGR3-202ENST00000562045 HSP90AB2PQ58FF8 381 aa30.34■■■□□ 2.45
SYNGR3-202ENST00000562045 USP35Q9P2H5 1018 aa30.34■■■□□ 2.45
SYNGR3-202ENST00000562045 RTL1A6NKG5 1358 aa30.33■■■□□ 2.45
SYNGR3-202ENST00000562045 ERBB3P21860 1342 aa30.33■■■□□ 2.45
SYNGR3-202ENST00000562045 SPATA31A1Q5TZJ5 1347 aa30.33■■■□□ 2.45
SYNGR3-202ENST00000562045 WDR17Q8IZU2 1322 aa30.33■■■□□ 2.45
SYNGR3-202ENST00000562045 ANKRD24Q8TF21 1146 aa30.33■■■□□ 2.45
SYNGR3-202ENST00000562045 LTV1Q96GA3 475 aaPredicted RBP30.33■■■□□ 2.45
SYNGR3-202ENST00000562045 CRB1P82279 1406 aa30.32■■■□□ 2.44
SYNGR3-202ENST00000562045 FLT4P35916 1363 aa30.31■■■□□ 2.44
SYNGR3-202ENST00000562045 MYBBP1AQ9BQG0 1328 aaKnown RBP30.31■■■□□ 2.44
SYNGR3-202ENST00000562045 RGS12O14924 1447 aa30.3■■■□□ 2.44
SYNGR3-202ENST00000562045 SMG6Q86US8 1419 aaKnown RBP30.3■■■□□ 2.44
SYNGR3-202ENST00000562045 CSB-PGBD3P0DP91 1061 aa30.29■■■□□ 2.44
SYNGR3-202ENST00000562045 TOM1L2Q6ZVM7 507 aa30.29■■■□□ 2.44
SYNGR3-202ENST00000562045 INSRP06213 1382 aa30.28■■■□□ 2.44
SYNGR3-202ENST00000562045 KIF24Q5T7B8 1368 aa30.28■■■□□ 2.44
SYNGR3-202ENST00000562045 FAM98CQ17RN3 349 aaKnown RBP30.27■■■□□ 2.44
SYNGR3-202ENST00000562045 BRWD3Q6RI45 1802 aa30.25■■■□□ 2.43
SYNGR3-202ENST00000562045 FAM208AQ9UK61 1670 aaKnown RBP30.25■■■□□ 2.43
SYNGR3-202ENST00000562045 WNK3Q9BYP7 1800 aa30.24■■■□□ 2.43
SYNGR3-202ENST00000562045 CDK12Q9NYV4 1490 aaPredicted RBP30.24■■■□□ 2.43
SYNGR3-202ENST00000562045 THSD7AQ9UPZ6 1657 aa30.24■■■□□ 2.43
SYNGR3-202ENST00000562045 NLRP2Q9NX02 1062 aa30.23■■■□□ 2.43
SYNGR3-202ENST00000562045 ONECUT3O60422 494 aaPredicted RBP30.22■■■□□ 2.43
SYNGR3-202ENST00000562045 MTHFSP49914 203 aa30.22■■■□□ 2.43
SYNGR3-202ENST00000562045 TCP11L2Q8N4U5 519 aa30.22■■■□□ 2.43
SYNGR3-202ENST00000562045 CARD10Q9BWT7 1032 aa30.22■■■□□ 2.43
SYNGR3-202ENST00000562045 MRS2Q9HD23 443 aa30.21■■■□□ 2.43
SYNGR3-202ENST00000562045 NBPF6Q5VWK0 638 aa30.19■■■□□ 2.42
SYNGR3-202ENST00000562045 SEPT12Q8IYM1 358 aa30.19■■■□□ 2.42
SYNGR3-202ENST00000562045 NBPF4Q96M43 638 aa30.19■■■□□ 2.42
SYNGR3-202ENST00000562045 BARGINQ6ZT62 677 aa30.18■■■□□ 2.42
SYNGR3-202ENST00000562045 PPP2R1AP30153 589 aa30.17■■■□□ 2.42
SYNGR3-202ENST00000562045 EIF4A2Q14240 407 aaKnown RBP30.17■■■□□ 2.42
SYNGR3-202ENST00000562045 CCDC184Q52MB2 194 aa30.17■■■□□ 2.42
SYNGR3-202ENST00000562045 USHBP1Q8N6Y0 703 aa30.17■■■□□ 2.42
SYNGR3-202ENST00000562045 THRAP3Q9Y2W1 955 aaKnown RBP30.16■■■□□ 2.42
SYNGR3-202ENST00000562045 EP400Q96L91 3159 aa30.15■■■□□ 2.42
SYNGR3-202ENST00000562045 A0A0G2JS52 829 aa30.15■■■□□ 2.42
SYNGR3-202ENST00000562045 MYT1Q01538 1121 aa30.15■■■□□ 2.42
SYNGR3-202ENST00000562045 DISP2A7MBM2 1401 aa30.14■■■□□ 2.42
SYNGR3-202ENST00000562045 PARP4Q9UKK3 1724 aaKnown RBP30.14■■■□□ 2.42
SYNGR3-202ENST00000562045 LRRC37A3O60309 1634 aa30.13■■■□□ 2.41
SYNGR3-202ENST00000562045 COL3A1P02461 1466 aaPredicted RBP30.12■■■□□ 2.41
SYNGR3-202ENST00000562045 EYA1Q99502 592 aa30.11■■■□□ 2.41
SYNGR3-202ENST00000562045 RGPD1P0DJD0 1748 aa30.1■■■□□ 2.41
SYNGR3-202ENST00000562045 IL13P35225 146 aa30.08■■■□□ 2.41
SYNGR3-202ENST00000562045 NCAPD2Q15021 1401 aa30.07■■■□□ 2.4
SYNGR3-202ENST00000562045 MEGF6O75095 1541 aa30.07■■■□□ 2.4
SYNGR3-202ENST00000562045 FAM182BQ5T319 152 aa30.06■■■□□ 2.4
SYNGR3-202ENST00000562045 IL2RBP14784 551 aa30.05■■■□□ 2.4
SYNGR3-202ENST00000562045 IGSF1Q8N6C5 1336 aa30.04■■■□□ 2.4
SYNGR3-202ENST00000562045 KRT27Q7Z3Y8 459 aa30.03■■■□□ 2.4
SYNGR3-202ENST00000562045 YTHDC1Q96MU7 727 aaKnown RBP30.03■■■□□ 2.4
SYNGR3-202ENST00000562045 SHANK3Q9BYB0 1731 aa30.01■■■□□ 2.4
SYNGR3-202ENST00000562045 DIAPH1O60610 1272 aaKnown RBP30■■■□□ 2.39
SYNGR3-202ENST00000562045 DDB1Q16531 1140 aa30■■■□□ 2.39
SYNGR3-202ENST00000562045 AEBP1Q8IUX7 1158 aa30■■■□□ 2.39
SYNGR3-202ENST00000562045 PNISRQ8TF01 805 aaKnown RBP30■■■□□ 2.39
SYNGR3-202ENST00000562045 CDCA7Q9BWT1 371 aaPredicted RBP30■■■□□ 2.39
SYNGR3-202ENST00000562045 FAM9BQ8IZU0 186 aa29.99■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms