RNA–Protein interactions for RNA: ENST00000561680.5

CMTM4-203, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 2

Gene CMTM4, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-203ENST00000561680 KIAA0232Q92628 1395 aa17.03■□□□□ 0.32
CMTM4-203ENST00000561680 BLMP54132 1417 aaPredicted RBP17.03■□□□□ 0.32
CMTM4-203ENST00000561680 CFAP53Q96M91 514 aa17.02■□□□□ 0.32
CMTM4-203ENST00000561680 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.01■□□□□ 0.31
CMTM4-203ENST00000561680 WNK3Q9BYP7 1800 aa17.01■□□□□ 0.31
CMTM4-203ENST00000561680 PPM1GO15355 546 aaPredicted RBP17.01■□□□□ 0.31
CMTM4-203ENST00000561680 HOXC9P31274 260 aa17.01■□□□□ 0.31
CMTM4-203ENST00000561680 AMPHP49418 695 aa17.01■□□□□ 0.31
CMTM4-203ENST00000561680 HAP1P54257 671 aaPredicted RBP17.01■□□□□ 0.31
CMTM4-203ENST00000561680 ZC3H6P61129 1189 aaKnown RBP17.01■□□□□ 0.31
CMTM4-203ENST00000561680 FBXO41Q8TF61 875 aa17.01■□□□□ 0.31
CMTM4-203ENST00000561680 LRP6O75581 1613 aa17■□□□□ 0.31
CMTM4-203ENST00000561680 IP6K1Q92551 441 aa17■□□□□ 0.31
CMTM4-203ENST00000561680 SPATA31A6Q5VVP1 1343 aa16.99■□□□□ 0.31
CMTM4-203ENST00000561680 HSP90AB2PQ58FF8 381 aa16.98■□□□□ 0.31
CMTM4-203ENST00000561680 PRDM11Q9NQV5 511 aa16.98■□□□□ 0.31
CMTM4-203ENST00000561680 VIRMAQ69YN4 1812 aaKnown RBP16.98■□□□□ 0.31
CMTM4-203ENST00000561680 DLG5Q8TDM6 1919 aa16.98■□□□□ 0.31
CMTM4-203ENST00000561680 ZBTB7CA1YPR0 619 aa16.97■□□□□ 0.31
CMTM4-203ENST00000561680 DIAPH1O60610 1272 aaKnown RBP16.97■□□□□ 0.31
CMTM4-203ENST00000561680 PNISRQ8TF01 805 aaKnown RBP16.97■□□□□ 0.31
CMTM4-203ENST00000561680 COL5A2P05997 1499 aaPredicted RBP16.97■□□□□ 0.31
CMTM4-203ENST00000561680 IL13P35225 146 aa16.95■□□□□ 0.3
CMTM4-203ENST00000561680 EIF4A2Q14240 407 aaKnown RBP16.95■□□□□ 0.3
CMTM4-203ENST00000561680 CHRNA2Q15822 529 aa16.95■□□□□ 0.3
CMTM4-203ENST00000561680 AXIN2Q9Y2T1 843 aa16.95■□□□□ 0.3
CMTM4-203ENST00000561680 NCAPD2Q15021 1401 aa16.94■□□□□ 0.3
CMTM4-203ENST00000561680 ERBB3P21860 1342 aa16.94■□□□□ 0.3
CMTM4-203ENST00000561680 PARP4Q9UKK3 1724 aaKnown RBP16.93■□□□□ 0.3
CMTM4-203ENST00000561680 SLIT2O94813 1529 aa16.93■□□□□ 0.3
CMTM4-203ENST00000561680 FAM83GA6ND36 823 aa16.93■□□□□ 0.3
CMTM4-203ENST00000561680 NUTM2BA6NNL0 878 aaPredicted RBP16.93■□□□□ 0.3
CMTM4-203ENST00000561680 NUTM2EB1AL46 878 aaPredicted RBP16.93■□□□□ 0.3
CMTM4-203ENST00000561680 NUTM2AQ8IVF1 878 aaPredicted RBP16.93■□□□□ 0.3
CMTM4-203ENST00000561680 WDR43Q15061 677 aaKnown RBP eCLIP16.92■□□□□ 0.3
CMTM4-203ENST00000561680 NUDCQ9Y266 331 aa16.92■□□□□ 0.3
CMTM4-203ENST00000561680 ADAMTS2O95450 1211 aa16.91■□□□□ 0.3
CMTM4-203ENST00000561680 ANKRD24Q8TF21 1146 aa16.91■□□□□ 0.3
CMTM4-203ENST00000561680 IGSF1Q8N6C5 1336 aa16.91■□□□□ 0.3
CMTM4-203ENST00000561680 FAM9BQ8IZU0 186 aa16.9■□□□□ 0.3
CMTM4-203ENST00000561680 PKD1L3Q7Z443 1732 aa16.9■□□□□ 0.3
CMTM4-203ENST00000561680 KDRP35968 1356 aa16.89■□□□□ 0.3
CMTM4-203ENST00000561680 U2SURPO15042 1029 aaKnown RBP16.89■□□□□ 0.29
CMTM4-203ENST00000561680 LTV1Q96GA3 475 aaPredicted RBP16.89■□□□□ 0.29
CMTM4-203ENST00000561680 SHANK3Q9BYB0 1731 aa16.88■□□□□ 0.29
CMTM4-203ENST00000561680 U2AF1L5P0DN76 240 aaPredicted RBP16.88■□□□□ 0.29
CMTM4-203ENST00000561680 U2AF1Q01081 240 aaKnown RBP eCLIP16.88■□□□□ 0.29
CMTM4-203ENST00000561680 ADAMTS8Q9UP79 889 aa16.88■□□□□ 0.29
CMTM4-203ENST00000561680 WDR17Q8IZU2 1322 aa16.88■□□□□ 0.29
CMTM4-203ENST00000561680 EYA1Q99502 592 aa16.87■□□□□ 0.29
CMTM4-203ENST00000561680 BTG4Q9NY30 223 aa16.87■□□□□ 0.29
CMTM4-203ENST00000561680 CRB1P82279 1406 aa16.86■□□□□ 0.29
CMTM4-203ENST00000561680 NBPF6Q5VWK0 638 aa16.85■□□□□ 0.29
CMTM4-203ENST00000561680 NBPF4Q96M43 638 aa16.85■□□□□ 0.29
CMTM4-203ENST00000561680 RSPH6AQ9H0K4 717 aa16.85■□□□□ 0.29
CMTM4-203ENST00000561680 BCL9LQ86UU0 1499 aa16.85■□□□□ 0.29
CMTM4-203ENST00000561680 C8orf37Q96NL8 207 aa16.84■□□□□ 0.29
CMTM4-203ENST00000561680 FCHSD2O94868 740 aa16.83■□□□□ 0.28
CMTM4-203ENST00000561680 HMOX1P09601 288 aa16.83■□□□□ 0.28
CMTM4-203ENST00000561680 CSB-PGBD3P0DP91 1061 aa16.83■□□□□ 0.28
CMTM4-203ENST00000561680 MEX3CQ5U5Q3 659 aaKnown RBP16.83■□□□□ 0.28
CMTM4-203ENST00000561680 SULT6B1Q6IMI4 303 aa16.83■□□□□ 0.28
CMTM4-203ENST00000561680 AEBP1Q8IUX7 1158 aa16.83■□□□□ 0.28
CMTM4-203ENST00000561680 FNBP4Q8N3X1 1017 aaPredicted RBP16.83■□□□□ 0.28
CMTM4-203ENST00000561680 STRN4Q9NRL3 753 aa16.83■□□□□ 0.28
CMTM4-203ENST00000561680 LARP1Q6PKG0 1096 aaKnown RBP16.82■□□□□ 0.28
CMTM4-203ENST00000561680 USHBP1Q8N6Y0 703 aa16.82■□□□□ 0.28
CMTM4-203ENST00000561680 NGLY1Q96IV0 654 aa16.82■□□□□ 0.28
CMTM4-203ENST00000561680 PLEKHF1Q96S99 279 aa16.82■□□□□ 0.28
CMTM4-203ENST00000561680 NLRP2Q9NX02 1062 aa16.82■□□□□ 0.28
CMTM4-203ENST00000561680 MEGF6O75095 1541 aa16.81■□□□□ 0.28
CMTM4-203ENST00000561680 PLEKHG2Q9H7P9 1386 aa16.81■□□□□ 0.28
CMTM4-203ENST00000561680 EVA1CP58658 441 aa16.81■□□□□ 0.28
CMTM4-203ENST00000561680 PNNQ9H307 717 aaKnown RBP16.81■□□□□ 0.28
CMTM4-203ENST00000561680 SCN11AQ9UI33 1791 aa16.8■□□□□ 0.28
CMTM4-203ENST00000561680 PRKAR2BP31323 418 aa16.8■□□□□ 0.28
CMTM4-203ENST00000561680 TOM1L2Q6ZVM7 507 aa16.8■□□□□ 0.28
CMTM4-203ENST00000561680 CCDC146Q8IYE0 955 aa16.8■□□□□ 0.28
CMTM4-203ENST00000561680 RUNDC1Q96C34 613 aa16.8■□□□□ 0.28
CMTM4-203ENST00000561680 CARD10Q9BWT7 1032 aa16.8■□□□□ 0.28
CMTM4-203ENST00000561680 LRRC37A3O60309 1634 aa16.8■□□□□ 0.28
CMTM4-203ENST00000561680 GLI3P10071 1580 aa16.8■□□□□ 0.28
CMTM4-203ENST00000561680 UNC5CLQ8IV45 518 aa16.79■□□□□ 0.28
CMTM4-203ENST00000561680 THSD7AQ9UPZ6 1657 aa16.78■□□□□ 0.28
CMTM4-203ENST00000561680 AFF2P51816 1311 aa16.78■□□□□ 0.28
CMTM4-203ENST00000561680 OVOS2A0A0G2JMS6 1433 aa16.78■□□□□ 0.28
CMTM4-203ENST00000561680 DISP2A7MBM2 1401 aa16.78■□□□□ 0.28
CMTM4-203ENST00000561680 ADAMTS7Q9UKP4 1686 aa16.77■□□□□ 0.28
CMTM4-203ENST00000561680 ATRNO75882 1429 aa16.77■□□□□ 0.27
CMTM4-203ENST00000561680 SPATA31A1Q5TZJ5 1347 aa16.76■□□□□ 0.27
CMTM4-203ENST00000561680 SPATA31A5Q5VU36 1347 aa16.76■□□□□ 0.27
CMTM4-203ENST00000561680 SPATA31A7Q8IWB4 1347 aa16.76■□□□□ 0.27
CMTM4-203ENST00000561680 MAPK8IP3Q9UPT6 1336 aa16.76■□□□□ 0.27
CMTM4-203ENST00000561680 USP21Q9UK80 565 aa16.76■□□□□ 0.27
CMTM4-203ENST00000561680 SIPA1L3O60292 1781 aaPredicted RBP16.76■□□□□ 0.27
CMTM4-203ENST00000561680 KAT6BQ8WYB5 2073 aa16.76■□□□□ 0.27
CMTM4-203ENST00000561680 BRWD3Q6RI45 1802 aa16.75■□□□□ 0.27
CMTM4-203ENST00000561680 VPS72Q15906 364 aa16.75■□□□□ 0.27
CMTM4-203ENST00000561680 PHACTR3Q96KR7 559 aa16.75■□□□□ 0.27
CMTM4-203ENST00000561680 APAF1O14727 1248 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms